Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 MIR4506-201ENST00000584693 77 ntBASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 uc_338.28-201ENST00000612082 187 ntBASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 AC005562.2-201ENST00000618264 111 ntBASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 Y_RNA.124-201ENST00000363339 93 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 RNU6-529P-201ENST00000363383 104 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 RNU6-978P-201ENST00000364371 103 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 SNORA14A-201ENST00000364773 135 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 AL133475.1-201ENST00000404414 305 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 MIR1302-4-201ENST00000408701 150 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 RNY4P30-201ENST00000410216 95 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 SNORA36B-201ENST00000410438 131 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 RN7SKP123-201ENST00000410732 291 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 RN7SKP284-201ENST00000411002 343 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 CYCSP48-201ENST00000417124 323 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 AL139281.1-201ENST00000422120 335 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 AC012308.1-201ENST00000451232 178 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 AC006483.1-201ENST00000487308 313 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 RNA5SP385-201ENST00000515947 110 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 RNU6-781P-201ENST00000516377 101 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 RNU7-115P-201ENST00000516433 55 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 Y_RNA.692-201ENST00000516627 105 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 RNU6-928P-201ENST00000516876 104 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 RNU2-60P-201ENST00000517290 128 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 MIR548AY-201ENST00000617669 107 ntBASIC2.93□□□□□ -1.94
SMPD4Q9NXE4 AC138915.1-201ENST00000565427 1685 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 RNU4-15P-201ENST00000362613 141 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 RNU6-32P-201ENST00000383948 107 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 RNY3P5-201ENST00000384127 102 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 RNU6-13P-201ENST00000384248 107 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 RNU6-12P-201ENST00000384604 107 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 SNORA1.3-201ENST00000384676 136 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 RNU6-41P-201ENST00000384741 107 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 MIR548B-201ENST00000385247 97 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 MIR548A3-201ENST00000385297 97 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 AL031121.1-201ENST00000406553 254 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 Y_RNA.617-201ENST00000410920 90 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 HSPE1P21-201ENST00000438283 308 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 AP004217.1-201ENST00000480579 346 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 RPL30P14-201ENST00000482744 348 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 MIR5006-201ENST00000583027 110 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 RPL30P11-203ENST00000598995 310 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 AC004832.5-201ENST00000608677 401 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 TCL6_2.1-201ENST00000615162 119 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 AL035425.3-201ENST00000564206 4996 ntBASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.92□□□□□ -1.94
SMPD4Q9NXE4 AL136360.1-201ENST00000503377 1900 ntBASIC2.91□□□□□ -1.94
SMPD4Q9NXE4 GABRG2-229ENST00000641017 3628 ntBASIC2.91□□□□□ -1.94
SMPD4Q9NXE4 AC062016.1-201ENST00000355719 319 ntBASIC2.91□□□□□ -1.94
SMPD4Q9NXE4 Y_RNA.120-201ENST00000363304 110 ntBASIC2.91□□□□□ -1.94
SMPD4Q9NXE4 SNORD73B-201ENST00000364394 72 ntBASIC2.91□□□□□ -1.94
SMPD4Q9NXE4 RNU1-112P-201ENST00000364401 164 ntBASIC2.91□□□□□ -1.94
SMPD4Q9NXE4 SNORD116-13-201ENST00000384408 92 ntBASIC2.91□□□□□ -1.94
SMPD4Q9NXE4 AL138827.1-201ENST00000402666 306 ntBASIC2.91□□□□□ -1.94
SMPD4Q9NXE4 RNA5SP184-201ENST00000411071 108 ntBASIC2.91□□□□□ -1.94
SMPD4Q9NXE4 AC245047.4-201ENST00000433189 144 ntBASIC2.91□□□□□ -1.94
SMPD4Q9NXE4 SNORD109B-201ENST00000458961 67 ntBASIC2.91□□□□□ -1.94
SMPD4Q9NXE4 SNORD109A-201ENST00000459128 67 ntBASIC2.91□□□□□ -1.94
SMPD4Q9NXE4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.91□□□□□ -1.94
SMPD4Q9NXE4 HSPE1P7-201ENST00000604681 321 ntBASIC2.91□□□□□ -1.94
SMPD4Q9NXE4 AL591926.4-201ENST00000616895 298 ntBASIC2.91□□□□□ -1.94
SMPD4Q9NXE4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SMPD4Q9NXE4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
SMPD4Q9NXE4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 Y_RNA.116-201ENST00000363292 103 ntBASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 MIR512-1-201ENST00000384913 84 ntBASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 MIR548A1-201ENST00000385041 97 ntBASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 RPS26P45-201ENST00000471748 340 ntBASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 RPS29P24-201ENST00000486345 171 ntBASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 Y_RNA.677-201ENST00000516401 85 ntBASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 EIF4A1P12-201ENST00000551910 141 ntBASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 AC025281.1-201ENST00000567026 265 ntBASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 MIR4513-201ENST00000581077 86 ntBASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 AL138880.2-201ENST00000616214 239 ntBASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SMPD4Q9NXE4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
SMPD4Q9NXE4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.89□□□□□ -1.95
SMPD4Q9NXE4 MIR449A-201ENST00000362113 91 ntBASIC2.89□□□□□ -1.95
SMPD4Q9NXE4 RNU6-484P-201ENST00000384016 107 ntBASIC2.89□□□□□ -1.95
SMPD4Q9NXE4 RNU6-905P-201ENST00000384434 107 ntBASIC2.89□□□□□ -1.95
SMPD4Q9NXE4 MIRLET7F2-201ENST00000385277 83 ntBASIC2.89□□□□□ -1.95
SMPD4Q9NXE4 RNA5SP252-201ENST00000391131 119 ntBASIC2.89□□□□□ -1.95
SMPD4Q9NXE4 Y_RNA.587-201ENST00000391210 103 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms