Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RNU6-1019P-201ENST00000364424 107 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 SNORD114-30-201ENST00000364448 72 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 RNU6-290P-201ENST00000365212 101 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 Y_RNA.510-201ENST00000384511 114 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 MIR568-201ENST00000385036 95 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 MTCYBP9-201ENST00000431021 303 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 AC018634.1-201ENST00000437554 401 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 TRBV12-1-201ENST00000479785 344 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 RNU6-1337P-201ENST00000516525 95 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 RNU6-63P-201ENST00000516690 95 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 SUB1P4-201ENST00000566062 339 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 MIR4287-201ENST00000579398 78 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 MIR3162-201ENST00000581818 82 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 AL162730.1-201ENST00000605734 292 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 RNU4-80P-201ENST00000363200 141 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 Y_RNA.418-201ENST00000384029 102 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 MIR144-201ENST00000384886 86 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 snosnR66.1-201ENST00000391095 99 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 AL512604.1-201ENST00000404812 257 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 RNU6-1203P-201ENST00000410703 110 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 RNA5SP100-201ENST00000410903 110 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 RNA5SP59-201ENST00000410922 110 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 RPS15AP28-201ENST00000435088 386 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 RNA5SP57-201ENST00000459463 123 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 TRBVB-201ENST00000477100 408 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 SNORA31.11-201ENST00000516528 139 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 RNA5SP402-201ENST00000517148 110 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 AC024995.1-201ENST00000523014 93 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 AC073413.2-201ENST00000604332 360 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 MIR203B-201ENST00000636080 86 ntBASIC2.04□□□□□ -2.08
LIN7CQ9NUP9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 RNU6-117P-201ENST00000365415 107 ntBASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 Y_RNA.461-201ENST00000384263 103 ntBASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 MIR27B-201ENST00000385129 97 ntBASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 MT-TW-201ENST00000387382 68 ntBASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 MIR1302-6-201ENST00000408466 90 ntBASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 RNU6-710P-201ENST00000410424 105 ntBASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 AL158823.1-201ENST00000418441 478 ntBASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 AC024067.1-201ENST00000426199 223 ntBASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 AL513328.1-201ENST00000446460 224 ntBASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 HMGN1P10-201ENST00000474557 553 ntBASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 RNU6-1278P-201ENST00000516130 107 ntBASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LIN7CQ9NUP9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.03□□□□□ -2.09
LIN7CQ9NUP9 AC008555.8-201ENST00000623602 2168 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 AL596028.1-201ENST00000326971 197 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 Y_RNA.111-201ENST00000363248 100 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 RNU6-112P-201ENST00000363599 104 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 Y_RNA.172-201ENST00000363765 102 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 Y_RNA.483-201ENST00000384380 101 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 SNORD116-13-201ENST00000384408 92 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 RNU6-136P-201ENST00000384663 107 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 RNU6-376P-201ENST00000384731 106 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 MIR17-201ENST00000385012 84 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 RNU6-855P-201ENST00000410395 104 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 AC010154.1-201ENST00000425857 269 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 HSPE1P13-201ENST00000451143 297 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 AC108938.1-201ENST00000451204 136 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 RPS26P45-201ENST00000471748 340 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 RNU6-1338P-201ENST00000516328 91 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 RNA5SP82-201ENST00000516707 92 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 RNU2-31P-201ENST00000516954 155 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 AL161670.1-201ENST00000554348 137 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 RPL21P9-201ENST00000556149 474 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 AL137847.3-201ENST00000611521 109 ntBASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.02□□□□□ -2.09
LIN7CQ9NUP9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
LIN7CQ9NUP9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
LIN7CQ9NUP9 RNA5SP68-201ENST00000363885 119 ntBASIC2.01□□□□□ -2.09
LIN7CQ9NUP9 Y_RNA.396-201ENST00000383949 103 ntBASIC2.01□□□□□ -2.09
LIN7CQ9NUP9 SNORA6-201ENST00000384033 151 ntBASIC2.01□□□□□ -2.09
LIN7CQ9NUP9 RNU6-472P-201ENST00000384299 107 ntBASIC2.01□□□□□ -2.09
LIN7CQ9NUP9 SNORA53-201ENST00000391141 249 ntBASIC2.01□□□□□ -2.09
LIN7CQ9NUP9 RNA5SP212-201ENST00000391223 107 ntBASIC2.01□□□□□ -2.09
LIN7CQ9NUP9 MTCO1P5-201ENST00000433573 344 ntBASIC2.01□□□□□ -2.09
LIN7CQ9NUP9 RPS29P21-201ENST00000496272 170 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms