Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 MRPS17P9-201ENST00000511924 393 ntBASIC2.07□□□□□ -2.08
DDX4Q9NQI0 AK6P2-201ENST00000549020 471 ntBASIC2.07□□□□□ -2.08
DDX4Q9NQI0 MIR4498-201ENST00000577599 66 ntBASIC2.07□□□□□ -2.08
DDX4Q9NQI0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.07□□□□□ -2.08
DDX4Q9NQI0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.07□□□□□ -2.08
DDX4Q9NQI0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
DDX4Q9NQI0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
DDX4Q9NQI0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
DDX4Q9NQI0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
DDX4Q9NQI0 RNU6-1266P-201ENST00000362794 105 ntBASIC2.06□□□□□ -2.08
DDX4Q9NQI0 Y_RNA.276-201ENST00000364732 109 ntBASIC2.06□□□□□ -2.08
DDX4Q9NQI0 RNU6-418P-201ENST00000384035 107 ntBASIC2.06□□□□□ -2.08
DDX4Q9NQI0 Y_RNA.462-201ENST00000384268 102 ntBASIC2.06□□□□□ -2.08
DDX4Q9NQI0 RNA5SP465-201ENST00000391195 109 ntBASIC2.06□□□□□ -2.08
DDX4Q9NQI0 HMGN2P39-201ENST00000398005 273 ntBASIC2.06□□□□□ -2.08
DDX4Q9NQI0 RNU6-57P-201ENST00000411348 103 ntBASIC2.06□□□□□ -2.08
DDX4Q9NQI0 AL353689.1-201ENST00000438895 199 ntBASIC2.06□□□□□ -2.08
DDX4Q9NQI0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.06□□□□□ -2.08
DDX4Q9NQI0 AC005176.2-201ENST00000596933 147 ntBASIC2.06□□□□□ -2.08
DDX4Q9NQI0 AL109918.3-201ENST00000603072 338 ntBASIC2.06□□□□□ -2.08
DDX4Q9NQI0 AC099654.10-201ENST00000640395 161 ntBASIC2.06□□□□□ -2.08
DDX4Q9NQI0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.06□□□□□ -2.08
DDX4Q9NQI0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
DDX4Q9NQI0 MIR340-201ENST00000362125 95 ntBASIC2.05□□□□□ -2.08
DDX4Q9NQI0 RNU1-58P-201ENST00000362413 163 ntBASIC2.05□□□□□ -2.08
DDX4Q9NQI0 RNU6-1164P-201ENST00000364428 107 ntBASIC2.05□□□□□ -2.08
DDX4Q9NQI0 SNORA72.2-201ENST00000365028 127 ntBASIC2.05□□□□□ -2.08
DDX4Q9NQI0 RNU6-738P-201ENST00000384531 106 ntBASIC2.05□□□□□ -2.08
DDX4Q9NQI0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.05□□□□□ -2.08
DDX4Q9NQI0 BTF3P4-201ENST00000418852 495 ntBASIC2.05□□□□□ -2.08
DDX4Q9NQI0 SUMO1P2-201ENST00000452524 304 ntBASIC2.05□□□□□ -2.08
DDX4Q9NQI0 RNU6-1143P-201ENST00000516125 104 ntBASIC2.05□□□□□ -2.08
DDX4Q9NQI0 RNU6-1146P-201ENST00000516282 102 ntBASIC2.05□□□□□ -2.08
DDX4Q9NQI0 SCARNA15.1-201ENST00000516384 125 ntBASIC2.05□□□□□ -2.08
DDX4Q9NQI0 Y_RNA.720-201ENST00000517166 92 ntBASIC2.05□□□□□ -2.08
DDX4Q9NQI0 MIR4419B-201ENST00000577260 68 ntBASIC2.05□□□□□ -2.08
DDX4Q9NQI0 AC011476.5-201ENST00000615594 130 ntBASIC2.05□□□□□ -2.08
DDX4Q9NQI0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
DDX4Q9NQI0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
DDX4Q9NQI0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
DDX4Q9NQI0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
DDX4Q9NQI0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.04□□□□□ -2.08
DDX4Q9NQI0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
DDX4Q9NQI0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
DDX4Q9NQI0 Y_RNA.4-201ENST00000362333 112 ntBASIC2.04□□□□□ -2.08
DDX4Q9NQI0 SNORD115-3-201ENST00000363100 82 ntBASIC2.04□□□□□ -2.08
DDX4Q9NQI0 RNU6-23P-201ENST00000363283 107 ntBASIC2.04□□□□□ -2.08
DDX4Q9NQI0 RNU6-961P-201ENST00000363893 105 ntBASIC2.04□□□□□ -2.08
DDX4Q9NQI0 SNORA63C-201ENST00000364578 129 ntBASIC2.04□□□□□ -2.08
DDX4Q9NQI0 SNORD63-201ENST00000384262 68 ntBASIC2.04□□□□□ -2.08
DDX4Q9NQI0 MIR518A2-201ENST00000384966 87 ntBASIC2.04□□□□□ -2.08
DDX4Q9NQI0 RNU5A-5P-201ENST00000411054 116 ntBASIC2.04□□□□□ -2.08
DDX4Q9NQI0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.04□□□□□ -2.08
DDX4Q9NQI0 AC016717.1-201ENST00000448918 286 ntBASIC2.04□□□□□ -2.08
DDX4Q9NQI0 RNU6-1137P-201ENST00000517073 99 ntBASIC2.04□□□□□ -2.08
DDX4Q9NQI0 CENPCP1-201ENST00000533085 2578 ntBASIC2.04□□□□□ -2.08
DDX4Q9NQI0 CBX3P4-201ENST00000538909 354 ntBASIC2.04□□□□□ -2.08
DDX4Q9NQI0 MIR4299-201ENST00000577899 72 ntBASIC2.04□□□□□ -2.08
DDX4Q9NQI0 AL159152.1-201ENST00000635019 2587 ntBASIC2.03□□□□□ -2.08
DDX4Q9NQI0 RNU6-626P-201ENST00000363354 107 ntBASIC2.03□□□□□ -2.08
DDX4Q9NQI0 Y_RNA.162-201ENST00000363683 102 ntBASIC2.03□□□□□ -2.08
DDX4Q9NQI0 Y_RNA.183-201ENST00000363882 113 ntBASIC2.03□□□□□ -2.08
DDX4Q9NQI0 RNU6-20P-201ENST00000384106 107 ntBASIC2.03□□□□□ -2.08
DDX4Q9NQI0 RPL23AP36-201ENST00000413895 458 ntBASIC2.03□□□□□ -2.08
DDX4Q9NQI0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.03□□□□□ -2.08
DDX4Q9NQI0 AC005002.2-201ENST00000438228 269 ntBASIC2.03□□□□□ -2.08
DDX4Q9NQI0 SNORA40.15-201ENST00000516884 107 ntBASIC2.03□□□□□ -2.08
DDX4Q9NQI0 SUMO2P18-201ENST00000518873 252 ntBASIC2.03□□□□□ -2.08
DDX4Q9NQI0 AC131281.1-201ENST00000522984 164 ntBASIC2.03□□□□□ -2.08
DDX4Q9NQI0 MIR4423-201ENST00000580922 80 ntBASIC2.03□□□□□ -2.08
DDX4Q9NQI0 RAC1P9-201ENST00000604990 392 ntBASIC2.03□□□□□ -2.08
DDX4Q9NQI0 AL353149.1-201ENST00000610667 244 ntBASIC2.03□□□□□ -2.08
DDX4Q9NQI0 AL590240.4-201ENST00000616908 390 ntBASIC2.03□□□□□ -2.08
DDX4Q9NQI0 AC006435.5-201ENST00000624486 112 ntBASIC2.03□□□□□ -2.08
DDX4Q9NQI0 Y_RNA.153-201ENST00000363615 91 ntBASIC2.02□□□□□ -2.09
DDX4Q9NQI0 RNA5SP493-201ENST00000364115 91 ntBASIC2.02□□□□□ -2.09
DDX4Q9NQI0 RNU6-1240P-201ENST00000365155 104 ntBASIC2.02□□□□□ -2.09
DDX4Q9NQI0 RNA5SP489-201ENST00000410986 109 ntBASIC2.02□□□□□ -2.09
DDX4Q9NQI0 AC113618.1-201ENST00000416747 285 ntBASIC2.02□□□□□ -2.09
DDX4Q9NQI0 AC096920.1-201ENST00000423991 241 ntBASIC2.02□□□□□ -2.09
DDX4Q9NQI0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.02□□□□□ -2.09
DDX4Q9NQI0 HMGB3P17-201ENST00000504195 649 ntBASIC2.02□□□□□ -2.09
DDX4Q9NQI0 Y_RNA.676-201ENST00000516393 96 ntBASIC2.02□□□□□ -2.09
DDX4Q9NQI0 AC025647.1-201ENST00000517879 253 ntBASIC2.02□□□□□ -2.09
DDX4Q9NQI0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.02□□□□□ -2.09
DDX4Q9NQI0 MIR3169-201ENST00000578032 83 ntBASIC2.02□□□□□ -2.09
DDX4Q9NQI0 AC005786.1-201ENST00000588553 154 ntBASIC2.02□□□□□ -2.09
DDX4Q9NQI0 AL096840.1-201ENST00000603287 93 ntBASIC2.02□□□□□ -2.09
DDX4Q9NQI0 AC006380.1-201ENST00000603598 186 ntBASIC2.02□□□□□ -2.09
DDX4Q9NQI0 AL360085.1-201ENST00000604713 532 ntBASIC2.02□□□□□ -2.09
DDX4Q9NQI0 PART1_1.1-201ENST00000611761 217 ntBASIC2.02□□□□□ -2.09
DDX4Q9NQI0 SNORD114-6-201ENST00000364393 72 ntBASIC2.01□□□□□ -2.09
DDX4Q9NQI0 RNU4-52P-201ENST00000384209 138 ntBASIC2.01□□□□□ -2.09
DDX4Q9NQI0 Y_RNA.570-201ENST00000384750 101 ntBASIC2.01□□□□□ -2.09
DDX4Q9NQI0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
DDX4Q9NQI0 MTND5P22-201ENST00000458380 195 ntBASIC2.01□□□□□ -2.09
DDX4Q9NQI0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.01□□□□□ -2.09
DDX4Q9NQI0 MIR502-201ENST00000606349 86 ntBASIC2.01□□□□□ -2.09
DDX4Q9NQI0 snoU13.31-201ENST00000607291 104 ntBASIC2.01□□□□□ -2.09
DDX4Q9NQI0 AC004467.1-201ENST00000615678 330 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms