Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AL118496.2-201ENST00000448300 230 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 SUMO1P2-201ENST00000452524 304 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 AC005042.3-201ENST00000453230 174 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 MTATP8P1-201ENST00000467115 207 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 RNU1-40P-201ENST00000516816 164 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 RNU1-97P-201ENST00000516872 164 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.9□□□□□ -2.11
HINT3Q9NQE9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.9□□□□□ -2.11
HINT3Q9NQE9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.9□□□□□ -2.11
HINT3Q9NQE9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.9□□□□□ -2.11
HINT3Q9NQE9 AC136443.5-201ENST00000603741 370 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.9□□□□□ -2.11
HINT3Q9NQE9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 U1.36-201ENST00000620684 176 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 SDR42E1P4-201ENST00000620894 481 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.89□□□□□ -2.11
HINT3Q9NQE9 ZNF702P-202ENST00000434269 1966 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HINT3Q9NQE9 Y_RNA.19-201ENST00000362462 99 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 SNORA27.1-201ENST00000362604 124 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 SNORA33-201ENST00000363664 130 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 RNU6-806P-201ENST00000365147 105 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 Y_RNA.331-201ENST00000365267 102 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 Y_RNA.361-201ENST00000365515 120 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 Y_RNA.459-201ENST00000384251 102 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 RNU6-21P-201ENST00000384710 107 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 AL031003.1-201ENST00000404229 172 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 SNORA11.4-201ENST00000408823 129 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 RNU4-30P-201ENST00000410245 143 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 RN7SKP223-201ENST00000410582 62 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 RPL23AP36-201ENST00000413895 458 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.89□□□□□ -2.11
HINT3Q9NQE9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.89□□□□□ -2.11
HINT3Q9NQE9 LINC01399-202ENST00000458450 244 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 AC025465.3-201ENST00000510570 311 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 RNU6-1143P-201ENST00000516125 104 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 AL137100.2-201ENST00000555786 315 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 MIR5094-201ENST00000578766 85 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 MIR3945-201ENST00000581853 98 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.89□□□□□ -2.11
HINT3Q9NQE9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HINT3Q9NQE9 CENPCP1-201ENST00000533085 2578 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 AL596028.1-201ENST00000326971 197 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 Y_RNA.26-201ENST00000362539 101 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 RNA5SP276-201ENST00000362580 94 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 SNORD113-8-201ENST00000363497 74 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 RNU6-271P-201ENST00000363858 105 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 RNA5SP467-201ENST00000391274 118 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 MIR873-201ENST00000401120 77 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.88□□□□□ -2.11
HINT3Q9NQE9 MRPS10P1-201ENST00000448483 130 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 RPL23AP3-201ENST00000453844 468 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 RPS27P22-201ENST00000478056 241 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 HMGB3P17-201ENST00000504195 649 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 SEPT14P8-201ENST00000508026 178 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 AC023157.2-201ENST00000540596 141 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.88□□□□□ -2.11
HINT3Q9NQE9 MIR4438-201ENST00000585271 93 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 AC002984.1-201ENST00000591692 448 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 SNORD113-5-201ENST00000607261 78 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 U6.73-201ENST00000619194 103 ntBASIC1.88□□□□□ -2.11
HINT3Q9NQE9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HINT3Q9NQE9 SNORD114-7-201ENST00000362520 77 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 Y_RNA.64-201ENST00000362845 102 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 SNORD81.1-201ENST00000363064 77 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 Y_RNA.124-201ENST00000363339 93 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 RNU6-324P-201ENST00000363957 106 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 Y_RNA.286-201ENST00000364813 102 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 RNU6-407P-201ENST00000365280 104 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.87□□□□□ -2.11
HINT3Q9NQE9 MIR515-2-201ENST00000384883 83 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 MIR515-1-201ENST00000384884 83 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 RNU6-1109P-201ENST00000391187 107 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 MIR548F4-201ENST00000408515 105 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 Y_RNA.602-201ENST00000410535 92 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.87□□□□□ -2.11
HINT3Q9NQE9 OOSP1P1-201ENST00000423265 274 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 AL731563.1-201ENST00000442202 214 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 RNA5SP20-201ENST00000515976 84 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 RNU6-436P-201ENST00000516171 114 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 RNU6-1045P-201ENST00000516321 107 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.87□□□□□ -2.11
HINT3Q9NQE9 AC069114.2-201ENST00000604699 304 ntBASIC1.87□□□□□ -2.11
HINT3Q9NQE9 RNU6-102P-201ENST00000384485 104 ntBASIC1.86□□□□□ -2.11
HINT3Q9NQE9 RPL21P38-201ENST00000418090 167 ntBASIC1.86□□□□□ -2.11
HINT3Q9NQE9 DYNLT3P2-201ENST00000442517 295 ntBASIC1.86□□□□□ -2.11
HINT3Q9NQE9 AC098869.1-201ENST00000481627 292 ntBASIC1.86□□□□□ -2.11
HINT3Q9NQE9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.86□□□□□ -2.11
HINT3Q9NQE9 RNU6-496P-201ENST00000516145 99 ntBASIC1.86□□□□□ -2.11
HINT3Q9NQE9 RNU6-635P-201ENST00000516651 102 ntBASIC1.86□□□□□ -2.11
HINT3Q9NQE9 AL117187.1-201ENST00000555482 181 ntBASIC1.86□□□□□ -2.11
HINT3Q9NQE9 SUB1P4-201ENST00000566062 339 ntBASIC1.86□□□□□ -2.11
HINT3Q9NQE9 MIR4648-201ENST00000580107 72 ntBASIC1.86□□□□□ -2.11
HINT3Q9NQE9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.86□□□□□ -2.11
HINT3Q9NQE9 AL359075.3-201ENST00000613288 217 ntBASIC1.86□□□□□ -2.11
HINT3Q9NQE9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.86□□□□□ -2.11
HINT3Q9NQE9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.86□□□□□ -2.11
HINT3Q9NQE9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HINT3Q9NQE9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.85□□□□□ -2.11
HINT3Q9NQE9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms