Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 AC073910.1-201ENST00000445047 438 ntBASIC1.56□□□□□ -2.16
RPF1Q9H9Y2 CHEK2P4-201ENST00000450340 246 ntBASIC1.56□□□□□ -2.16
RPF1Q9H9Y2 SNORD65B-201ENST00000459126 73 ntBASIC1.56□□□□□ -2.16
RPF1Q9H9Y2 RPL36AP21-201ENST00000490372 323 ntBASIC1.56□□□□□ -2.16
RPF1Q9H9Y2 AL163195.1-201ENST00000496941 348 ntBASIC1.56□□□□□ -2.16
RPF1Q9H9Y2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.56□□□□□ -2.16
RPF1Q9H9Y2 SNORA40.9-201ENST00000515895 93 ntBASIC1.56□□□□□ -2.16
RPF1Q9H9Y2 AC027419.1-201ENST00000522976 328 ntBASIC1.56□□□□□ -2.16
RPF1Q9H9Y2 AL161670.1-201ENST00000554348 137 ntBASIC1.56□□□□□ -2.16
RPF1Q9H9Y2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.56□□□□□ -2.16
RPF1Q9H9Y2 AC138305.3-201ENST00000624988 240 ntBASIC1.56□□□□□ -2.16
RPF1Q9H9Y2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 AL391987.6-201ENST00000305671 199 ntBASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 U8.1-201ENST00000362843 134 ntBASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 RNU4-73P-201ENST00000363164 141 ntBASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 Y_RNA.238-201ENST00000364441 102 ntBASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 RNU6-1264P-201ENST00000383891 107 ntBASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 RNU6-1040P-201ENST00000383974 107 ntBASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 MIR320A-201ENST00000385302 82 ntBASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 MIR1267-201ENST00000408723 78 ntBASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 RNU6-321P-201ENST00000410912 106 ntBASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 AC069257.2-201ENST00000441819 155 ntBASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 RPL26P26-201ENST00000480251 434 ntBASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 RNA5SP481-201ENST00000516814 122 ntBASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 CYCSP23-201ENST00000519781 313 ntBASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 MIR4422-201ENST00000581938 83 ntBASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 AC133104.2-201ENST00000615272 193 ntBASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RPF1Q9H9Y2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 RNU6-490P-201ENST00000362985 107 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 RNY1P10-201ENST00000363268 113 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 RNU6-454P-201ENST00000364292 107 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 Y_RNA.314-201ENST00000365114 102 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 Y_RNA.463-201ENST00000384271 102 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 RNA5SP109-201ENST00000391010 116 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 RNU1-78P-201ENST00000391248 165 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 AL355796.1-201ENST00000406706 323 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 AC004965.1-201ENST00000413033 213 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 AC096644.2-201ENST00000429278 159 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 RPS27P1-201ENST00000450552 247 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 MTND3P22-201ENST00000510932 243 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 AC074133.1-201ENST00000515696 183 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 RAB11AP2-201ENST00000545905 639 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 MIR4795-201ENST00000584182 89 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 AC022432.1-201ENST00000595739 310 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 LARP7P1-201ENST00000605576 316 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 U6.73-201ENST00000619194 103 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 AC095038.3-201ENST00000634439 195 ntBASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RPF1Q9H9Y2 SNORA7.1-201ENST00000363750 139 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 Y_RNA.187-201ENST00000363918 113 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 SNORA72.2-201ENST00000365028 127 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 RNU6-708P-201ENST00000384217 107 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 Y_RNA.496-201ENST00000384444 101 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 Y_RNA.498-201ENST00000384460 102 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 MIR515-2-201ENST00000384883 83 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 MIR515-1-201ENST00000384884 83 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 RNA5SP323-201ENST00000391094 133 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 RNU6-1186P-201ENST00000410429 97 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 MTCO2P27-201ENST00000420740 428 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 MTND4LP11-201ENST00000422184 280 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 RAB28P5-201ENST00000427490 651 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 JTBP1-201ENST00000441314 247 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 RNU6-625P-201ENST00000459412 107 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 AC005840.1-201ENST00000498412 377 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 RNU7-4P-201ENST00000516961 62 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 AC023157.2-201ENST00000540596 141 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 SNORA77B-201ENST00000578179 125 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 AC104985.2-201ENST00000620598 500 ntBASIC1.53□□□□□ -2.16
RPF1Q9H9Y2 MTND5P10-201ENST00000603719 1809 ntBASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 MIR410-201ENST00000362222 80 ntBASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 RNU6-1115P-201ENST00000362490 106 ntBASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 RNU6-1266P-201ENST00000362794 105 ntBASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 RNU6-961P-201ENST00000363893 105 ntBASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 RNU6-926P-201ENST00000384075 107 ntBASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 SNORA20B-201ENST00000384220 132 ntBASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 RPS26P45-201ENST00000471748 340 ntBASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 RNU1-142P-201ENST00000516682 145 ntBASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 MIR2355-201ENST00000517199 87 ntBASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 AC024995.1-201ENST00000523014 93 ntBASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 AL137100.2-201ENST00000555786 315 ntBASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 AC055872.1-201ENST00000570978 278 ntBASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 AC022217.4-201ENST00000604389 163 ntBASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 AL359075.3-201ENST00000613288 217 ntBASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.52□□□□□ -2.17
RPF1Q9H9Y2 Y_RNA.315-201ENST00000365117 102 ntBASIC1.51□□□□□ -2.17
RPF1Q9H9Y2 RNU6-203P-201ENST00000384038 104 ntBASIC1.51□□□□□ -2.17
RPF1Q9H9Y2 RPL21P1-201ENST00000399532 476 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 288.7 ms