Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNU2-52P-201ENST00000410680 190 ntBASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 RPS12P18-201ENST00000442381 270 ntBASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-659P-201ENST00000516454 104 ntBASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 AC110079.1-202ENST00000635213 138 ntBASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 SNORA14A-201ENST00000364773 135 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 SNORD31B-201ENST00000364977 69 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-438P-201ENST00000365561 103 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-1083P-201ENST00000384022 107 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 RNY3P5-201ENST00000384127 102 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 SNORA79-201ENST00000408376 140 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 RNU4-43P-201ENST00000410628 137 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 EEF1B2P7-201ENST00000451177 676 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 AC090515.1-201ENST00000465295 476 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 RPS27P22-201ENST00000478056 241 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 AC008885.1-201ENST00000514930 301 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 RNA5SP341-201ENST00000516261 117 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 RNU7-116P-201ENST00000516940 62 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-586P-201ENST00000517265 104 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 AC025647.1-201ENST00000517879 253 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 AC090142.3-201ENST00000519012 385 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 MIR378D2-201ENST00000580636 98 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 AP001340.1-201ENST00000624405 217 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 AC108206.1-201ENST00000570186 4159 ntBASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-235P-201ENST00000362644 107 ntBASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-743P-201ENST00000364151 106 ntBASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 U8.9-201ENST00000365667 134 ntBASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-1080P-201ENST00000383982 107 ntBASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 RN7SL20P-201ENST00000488827 297 ntBASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 RAC1P5-201ENST00000512182 576 ntBASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 RNA5SP76-201ENST00000516277 87 ntBASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-948P-201ENST00000516374 107 ntBASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 AC015720.1-201ENST00000565251 277 ntBASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 AL929325.1-201ENST00000603096 117 ntBASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 U7.2-201ENST00000607576 63 ntBASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 MIR622-201ENST00000638396 96 ntBASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 AL159152.1-201ENST00000635019 2587 ntBASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 AC103988.1-201ENST00000566382 2177 ntBASIC2.7□□□□□ -1.98
SEC61A2Q9H9S3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SEC61A2Q9H9S3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.69□□□□□ -1.98
SEC61A2Q9H9S3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.69□□□□□ -1.98
SEC61A2Q9H9S3 MIR22-201ENST00000362190 85 ntBASIC2.69□□□□□ -1.98
SEC61A2Q9H9S3 MIR483-201ENST00000385070 76 ntBASIC2.69□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.69□□□□□ -1.98
SEC61A2Q9H9S3 AC016909.1-201ENST00000415916 166 ntBASIC2.69□□□□□ -1.98
SEC61A2Q9H9S3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.69□□□□□ -1.98
SEC61A2Q9H9S3 AC010531.2-201ENST00000465012 153 ntBASIC2.69□□□□□ -1.98
SEC61A2Q9H9S3 RN7SL499P-201ENST00000481141 276 ntBASIC2.69□□□□□ -1.98
SEC61A2Q9H9S3 RN7SL633P-201ENST00000488974 297 ntBASIC2.69□□□□□ -1.98
SEC61A2Q9H9S3 RPL36AP21-201ENST00000490372 323 ntBASIC2.69□□□□□ -1.98
SEC61A2Q9H9S3 MIR1248-201ENST00000629190 106 ntBASIC2.69□□□□□ -1.98
SEC61A2Q9H9S3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SEC61A2Q9H9S3 CENPCP1-201ENST00000533085 2578 ntBASIC2.69□□□□□ -1.98
SEC61A2Q9H9S3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.69□□□□□ -1.98
SEC61A2Q9H9S3 MAPK10-266ENST00000641066 6555 ntBASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-1056P-201ENST00000383996 107 ntBASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 Y_RNA.584-201ENST00000391090 114 ntBASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 RNU1-101P-201ENST00000391171 127 ntBASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 RNA5SP496-201ENST00000391240 109 ntBASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 SNORA26.7-201ENST00000391288 122 ntBASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 RN7SKP101-201ENST00000411376 320 ntBASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 RPL30P4-201ENST00000429309 333 ntBASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 HMGN2P18-201ENST00000450680 270 ntBASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 RN7SKP43-201ENST00000516173 320 ntBASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 MIR4325-201ENST00000583049 90 ntBASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 AC005000.2-201ENST00000605468 310 ntBASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 AL162274.2-201ENST00000614406 332 ntBASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
SEC61A2Q9H9S3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 AC138915.1-201ENST00000565427 1685 ntBASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms