Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MIR338-201ENST00000636369 67 ntBASIC1.28□□□□□ -2.2
NXF3Q9H4D5 MIR1244-2-201ENST00000636449 85 ntBASIC1.28□□□□□ -2.2
NXF3Q9H4D5 MIR1244-4-202ENST00000636813 85 ntBASIC1.28□□□□□ -2.2
NXF3Q9H4D5 snoU2-30.2-201ENST00000362805 70 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 Y_RNA.259-201ENST00000364619 101 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 Y_RNA.358-201ENST00000365491 99 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 MIR625-201ENST00000385047 85 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 MIR150-201ENST00000385048 84 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 RNU1-78P-201ENST00000391248 165 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 MIR1267-201ENST00000408723 78 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 RNU6-1156P-201ENST00000410365 100 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 AC016909.1-201ENST00000415916 166 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 AC008134.1-201ENST00000420943 193 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 CST2P1-201ENST00000425770 87 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.27□□□□□ -2.21
NXF3Q9H4D5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.27□□□□□ -2.21
NXF3Q9H4D5 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 AC069257.2-201ENST00000441819 155 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.27□□□□□ -2.21
NXF3Q9H4D5 Y_RNA.632-201ENST00000459189 102 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 MIR2053-201ENST00000459295 91 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.27□□□□□ -2.21
NXF3Q9H4D5 RNU6-1146P-201ENST00000516282 102 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 RN7SKP49-201ENST00000516675 260 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 RNA5SP481-201ENST00000516814 122 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.27□□□□□ -2.21
NXF3Q9H4D5 AC126177.8-201ENST00000618339 1015 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.27□□□□□ -2.21
NXF3Q9H4D5 MIR96-201ENST00000362288 78 ntBASIC1.26□□□□□ -2.21
NXF3Q9H4D5 SNORD33-201ENST00000362761 85 ntBASIC1.26□□□□□ -2.21
NXF3Q9H4D5 RNU1-96P-201ENST00000364163 162 ntBASIC1.26□□□□□ -2.21
NXF3Q9H4D5 RNU6-1019P-201ENST00000364424 107 ntBASIC1.26□□□□□ -2.21
NXF3Q9H4D5 Y_RNA.356-201ENST00000365475 113 ntBASIC1.26□□□□□ -2.21
NXF3Q9H4D5 RNU6-296P-201ENST00000384608 107 ntBASIC1.26□□□□□ -2.21
NXF3Q9H4D5 MIR520A-201ENST00000384862 85 ntBASIC1.26□□□□□ -2.21
NXF3Q9H4D5 MTCO2P27-201ENST00000420740 428 ntBASIC1.26□□□□□ -2.21
NXF3Q9H4D5 MTND4LP11-201ENST00000422184 280 ntBASIC1.26□□□□□ -2.21
NXF3Q9H4D5 HMGN2P34-201ENST00000437647 269 ntBASIC1.26□□□□□ -2.21
NXF3Q9H4D5 SNORD19B-201ENST00000459623 84 ntBASIC1.26□□□□□ -2.21
NXF3Q9H4D5 AC074133.1-201ENST00000515696 183 ntBASIC1.26□□□□□ -2.21
NXF3Q9H4D5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.26□□□□□ -2.21
NXF3Q9H4D5 AC022868.1-201ENST00000517767 391 ntBASIC1.26□□□□□ -2.21
NXF3Q9H4D5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.26□□□□□ -2.21
NXF3Q9H4D5 AC087588.2-201ENST00000617667 426 ntBASIC1.26□□□□□ -2.21
NXF3Q9H4D5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
NXF3Q9H4D5 RNU6-490P-201ENST00000362985 107 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 SNORA33-201ENST00000363664 130 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 SNORD114-27-201ENST00000363766 70 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 Y_RNA.187-201ENST00000363918 113 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 RNU6-879P-201ENST00000364328 108 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 Y_RNA.287-201ENST00000364853 94 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 RNU6-1240P-201ENST00000365155 104 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 RNU6-1040P-201ENST00000383974 107 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 MIR515-2-201ENST00000384883 83 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 MIR515-1-201ENST00000384884 83 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 MIR559-201ENST00000385188 96 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 MT-TD-201ENST00000387419 68 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 SNORA69.1-201ENST00000390904 137 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 RNU6-360P-201ENST00000390944 104 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 Y_RNA.592-201ENST00000410274 109 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 ELOCP21-201ENST00000412558 336 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 AC114482.1-201ENST00000418010 247 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 TOMM22P2-201ENST00000430735 237 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 AC245047.4-201ENST00000433189 144 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 AC015922.2-201ENST00000435593 184 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 AC005908.1-201ENST00000468701 347 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 AC099513.1-201ENST00000490423 301 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 MTND3P22-201ENST00000510932 243 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 RNA5SP445-201ENST00000515889 115 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 RNU7-4P-201ENST00000516961 62 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 AC091144.1-201ENST00000519573 138 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 AC093027.1-201ENST00000546698 429 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 AC008269.2-201ENST00000561915 1105 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 AC084781.2-201ENST00000615568 161 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 AC006001.4-201ENST00000622243 395 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.25□□□□□ -2.21
NXF3Q9H4D5 AC112487.2-201ENST00000637950 304 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 AC073544.1-201ENST00000600110 1595 ntBASIC1.25□□□□□ -2.21
NXF3Q9H4D5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
NXF3Q9H4D5 MIR410-201ENST00000362222 80 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 MIR26B-201ENST00000362251 77 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 RNA5SP361-201ENST00000362686 118 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 RNU6-1301P-201ENST00000362724 104 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 RNY3P11-201ENST00000364153 102 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 SNORA63D-201ENST00000364359 132 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 RNU6-439P-201ENST00000384188 106 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 RNU6-318P-201ENST00000384283 103 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 MIR1253-201ENST00000408273 105 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 MTND4P28-201ENST00000426217 387 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 JTBP1-201ENST00000441314 247 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 PCNPP5-201ENST00000452246 481 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 AC144568.1-201ENST00000520139 137 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.24□□□□□ -2.21
NXF3Q9H4D5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.24□□□□□ -2.21
NXF3Q9H4D5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 AL357075.2-201ENST00000614906 189 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 Y_RNA.804-201ENST00000615262 101 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 AL008636.1-201ENST00000625038 1018 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.24□□□□□ -2.21
NXF3Q9H4D5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms