Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 Y_RNA.274-201ENST00000364714 101 ntBASIC2.26□□□□□ -2.05
CDT1Q9H211 RNU6-740P-201ENST00000364734 105 ntBASIC2.26□□□□□ -2.05
CDT1Q9H211 SNORA67.2-201ENST00000384300 149 ntBASIC2.26□□□□□ -2.05
CDT1Q9H211 Y_RNA.498-201ENST00000384460 102 ntBASIC2.26□□□□□ -2.05
CDT1Q9H211 RNU5A-5P-201ENST00000411054 116 ntBASIC2.26□□□□□ -2.05
CDT1Q9H211 RAB28P5-201ENST00000427490 651 ntBASIC2.26□□□□□ -2.05
CDT1Q9H211 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.26□□□□□ -2.05
CDT1Q9H211 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.26□□□□□ -2.05
CDT1Q9H211 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.26□□□□□ -2.05
CDT1Q9H211 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.26□□□□□ -2.05
CDT1Q9H211 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.26□□□□□ -2.05
CDT1Q9H211 MIR3145-201ENST00000580727 82 ntBASIC2.26□□□□□ -2.05
CDT1Q9H211 AC005176.2-201ENST00000596933 147 ntBASIC2.26□□□□□ -2.05
CDT1Q9H211 AC022441.3-201ENST00000605737 136 ntBASIC2.26□□□□□ -2.05
CDT1Q9H211 SNORD113-5-201ENST00000607261 78 ntBASIC2.26□□□□□ -2.05
CDT1Q9H211 U4atac.1-201ENST00000618345 95 ntBASIC2.26□□□□□ -2.05
CDT1Q9H211 AC091932.3-201ENST00000624223 323 ntBASIC2.26□□□□□ -2.05
CDT1Q9H211 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDT1Q9H211 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDT1Q9H211 ZNF720P1-201ENST00000562403 1939 ntBASIC2.25□□□□□ -2.05
CDT1Q9H211 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDT1Q9H211 MIRLET7G-201ENST00000362280 84 ntBASIC2.25□□□□□ -2.05
CDT1Q9H211 SNORD114-1-201ENST00000362705 72 ntBASIC2.25□□□□□ -2.05
CDT1Q9H211 Y_RNA.352-201ENST00000365439 102 ntBASIC2.25□□□□□ -2.05
CDT1Q9H211 Y_RNA.478-201ENST00000384358 107 ntBASIC2.25□□□□□ -2.05
CDT1Q9H211 Y_RNA.569-201ENST00000384749 103 ntBASIC2.25□□□□□ -2.05
CDT1Q9H211 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CDT1Q9H211 RNU2-64P-201ENST00000411315 191 ntBASIC2.25□□□□□ -2.05
CDT1Q9H211 AL445646.1-201ENST00000431784 216 ntBASIC2.25□□□□□ -2.05
CDT1Q9H211 UQCRBP2-201ENST00000447827 297 ntBASIC2.25□□□□□ -2.05
CDT1Q9H211 RNU6-625P-201ENST00000459412 107 ntBASIC2.25□□□□□ -2.05
CDT1Q9H211 SNORA4.4-201ENST00000515921 135 ntBASIC2.25□□□□□ -2.05
CDT1Q9H211 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.25□□□□□ -2.05
CDT1Q9H211 AC009779.6-201ENST00000603972 165 ntBASIC2.25□□□□□ -2.05
CDT1Q9H211 AC025754.2-201ENST00000606491 432 ntBASIC2.25□□□□□ -2.05
CDT1Q9H211 MIR6895-201ENST00000613497 78 ntBASIC2.25□□□□□ -2.05
CDT1Q9H211 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.25□□□□□ -2.05
CDT1Q9H211 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.25□□□□□ -2.05
CDT1Q9H211 Y_RNA.331-201ENST00000365267 102 ntBASIC2.24□□□□□ -2.05
CDT1Q9H211 Y_RNA.383-201ENST00000383855 97 ntBASIC2.24□□□□□ -2.05
CDT1Q9H211 AL591806.2-201ENST00000433122 173 ntBASIC2.24□□□□□ -2.05
CDT1Q9H211 MTND5P15-201ENST00000434246 349 ntBASIC2.24□□□□□ -2.05
CDT1Q9H211 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CDT1Q9H211 AL603825.1-201ENST00000438481 80 ntBASIC2.24□□□□□ -2.05
CDT1Q9H211 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
CDT1Q9H211 SNORD116-28-201ENST00000516123 91 ntBASIC2.24□□□□□ -2.05
CDT1Q9H211 RNU6-991P-201ENST00000516168 107 ntBASIC2.24□□□□□ -2.05
CDT1Q9H211 RNA5SP458-201ENST00000516188 119 ntBASIC2.24□□□□□ -2.05
CDT1Q9H211 RNA5SP82-201ENST00000516707 92 ntBASIC2.24□□□□□ -2.05
CDT1Q9H211 RNA5SP490-201ENST00000517141 136 ntBASIC2.24□□□□□ -2.05
CDT1Q9H211 SNORD11B-201ENST00000607707 90 ntBASIC2.24□□□□□ -2.05
CDT1Q9H211 Y_RNA.783-201ENST00000613546 102 ntBASIC2.24□□□□□ -2.05
CDT1Q9H211 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.24□□□□□ -2.05
CDT1Q9H211 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
CDT1Q9H211 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.24□□□□□ -2.05
CDT1Q9H211 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CDT1Q9H211 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CDT1Q9H211 SNORA3A-201ENST00000364113 130 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 RNU6-1305P-201ENST00000364353 104 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 RNU6-200P-201ENST00000364743 107 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 SNORD31B-201ENST00000364977 69 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 AL357139.1-201ENST00000407792 426 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 MIR1289-2-201ENST00000408360 111 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 MIR548H3-201ENST00000408771 118 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 AC009310.1-201ENST00000414414 451 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 MTCO1P5-201ENST00000433573 344 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.23□□□□□ -2.05
CDT1Q9H211 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.23□□□□□ -2.05
CDT1Q9H211 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.23□□□□□ -2.05
CDT1Q9H211 AC074133.1-201ENST00000515696 183 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 RNU2-31P-201ENST00000516954 155 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 CYCSP26-201ENST00000534107 320 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 NDUFA5P6-201ENST00000542110 379 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 AC011921.3-201ENST00000605540 361 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 U2.14-201ENST00000615943 113 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 AL590240.4-201ENST00000616908 390 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 AC012640.5-201ENST00000623897 319 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 AC068205.3-201ENST00000636385 468 ntBASIC2.23□□□□□ -2.05
CDT1Q9H211 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
CDT1Q9H211 Y_RNA.122-201ENST00000363331 96 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 RNY1-201ENST00000364228 113 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 Y_RNA.230-201ENST00000364348 109 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 RNU6-326P-201ENST00000365480 107 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 RNU6-438P-201ENST00000365561 103 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 RNU6-662P-201ENST00000384253 104 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 RNU6-21P-201ENST00000384710 107 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 MIR548B-201ENST00000385247 97 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 MIR548I3-201ENST00000408378 149 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 MIR1283-1-201ENST00000408494 87 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 MIR548I1-201ENST00000408810 149 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 CR769767.1-201ENST00000436337 346 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.22□□□□□ -2.05
CDT1Q9H211 PRELID3BP1-201ENST00000457142 540 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 AC091959.1-201ENST00000495857 238 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 AC093259.1-201ENST00000509755 300 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.22□□□□□ -2.05
CDT1Q9H211 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.22□□□□□ -2.05
CDT1Q9H211 AC022202.1-201ENST00000613515 211 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 AC006001.4-201ENST00000622243 395 ntBASIC2.22□□□□□ -2.05
CDT1Q9H211 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms