Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RNA5SP264-201ENST00000363115 107 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 Y_RNA.167-201ENST00000363735 109 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 SNORA75-201ENST00000384158 137 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 RNU6-342P-201ENST00000384521 104 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 RNU6-376P-201ENST00000384731 106 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 MIR891A-201ENST00000401237 79 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 SNORD99-201ENST00000408612 74 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.36□□□□□ -2.35
UPK3BQ9BT76 MTND4LP16-201ENST00000440828 295 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 AC093019.1-201ENST00000443135 252 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.36□□□□□ -2.35
UPK3BQ9BT76 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.36□□□□□ -2.35
UPK3BQ9BT76 AL157398.1-201ENST00000452981 186 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.36□□□□□ -2.35
UPK3BQ9BT76 RNU6-956P-201ENST00000458868 103 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 AC098869.1-201ENST00000481627 292 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 AC083904.1-201ENST00000487828 231 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.36□□□□□ -2.35
UPK3BQ9BT76 ACA59.1-201ENST00000515966 143 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 AC022868.1-201ENST00000517767 391 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 AC018659.1-201ENST00000551083 169 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 MIR3684-201ENST00000579779 74 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 AC091178.2-201ENST00000584401 117 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 Z83818.1-201ENST00000603584 150 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 AC009229.3-201ENST00000608056 282 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 AC010999.1-201ENST00000611856 324 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 PVT1_3.1-201ENST00000620853 95 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 AC099654.12-201ENST00000639868 649 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
UPK3BQ9BT76 AL589743.1-201ENST00000551932 2712 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 MIRLET7C-201ENST00000362160 84 ntBASIC0.35□□□□□ -2.35
UPK3BQ9BT76 RNU6-254P-201ENST00000363377 107 ntBASIC0.35□□□□□ -2.35
UPK3BQ9BT76 SNORA20B-201ENST00000384220 132 ntBASIC0.35□□□□□ -2.35
UPK3BQ9BT76 RNU6-163P-201ENST00000384396 106 ntBASIC0.35□□□□□ -2.35
UPK3BQ9BT76 SNORD89-201ENST00000390981 114 ntBASIC0.35□□□□□ -2.35
UPK3BQ9BT76 MIR936-201ENST00000401264 98 ntBASIC0.35□□□□□ -2.35
UPK3BQ9BT76 MTCYBP4-201ENST00000401524 249 ntBASIC0.35□□□□□ -2.35
UPK3BQ9BT76 AL162725.1-201ENST00000435405 301 ntBASIC0.35□□□□□ -2.35
UPK3BQ9BT76 RNU6-1132P-201ENST00000459214 107 ntBASIC0.35□□□□□ -2.35
UPK3BQ9BT76 RPL30P10-201ENST00000488148 337 ntBASIC0.35□□□□□ -2.35
UPK3BQ9BT76 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.35□□□□□ -2.35
UPK3BQ9BT76 MIR4711-201ENST00000578274 70 ntBASIC0.35□□□□□ -2.35
UPK3BQ9BT76 MIR3192-201ENST00000584920 77 ntBASIC0.35□□□□□ -2.35
UPK3BQ9BT76 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.35□□□□□ -2.35
UPK3BQ9BT76 AC097520.1-201ENST00000624435 385 ntBASIC0.35□□□□□ -2.35
UPK3BQ9BT76 RNU6-833P-201ENST00000363486 107 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 SNORD18A-201ENST00000363753 72 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 RNU6-1335P-201ENST00000365426 107 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 MIR514A2-201ENST00000385131 88 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 MIR514A3-201ENST00000385132 88 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 RPL23AP50-201ENST00000434149 455 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 DAP3P1-201ENST00000441522 278 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 AC233266.1-201ENST00000454518 96 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 snoU13.25-201ENST00000458945 104 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 AP000870.1-201ENST00000472927 406 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 RNU7-175P-201ENST00000515915 61 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 RNA5SP20-201ENST00000515976 84 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 RNU6-496P-201ENST00000516145 99 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.34□□□□□ -2.36
UPK3BQ9BT76 AC134698.4-201ENST00000523451 826 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.34□□□□□ -2.36
UPK3BQ9BT76 AC023827.1-201ENST00000569247 97 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 AC131055.1-201ENST00000584626 316 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 AC242852.1-201ENST00000612151 96 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 AC093913.1-201ENST00000614178 329 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 AC007742.2-201ENST00000618226 398 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 7SK.10-201ENST00000621414 298 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 AC243829.3-201ENST00000622177 108 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 AC244015.1-201ENST00000622301 99 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 MIR5087-201ENST00000635826 76 ntBASIC0.34□□□□□ -2.36
UPK3BQ9BT76 RNA5SP499-201ENST00000363982 119 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 Y_RNA.231-201ENST00000364358 102 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 RNU6-407P-201ENST00000365280 104 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 Y_RNA.409-201ENST00000383990 98 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 Y_RNA.540-201ENST00000384638 111 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 RNU6-1105P-201ENST00000384774 107 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 MIR526A1-201ENST00000384897 85 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 AC114737.2-201ENST00000421583 173 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 AC092423.1-201ENST00000430165 186 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.33□□□□□ -2.36
UPK3BQ9BT76 Z98949.2-201ENST00000440996 144 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.33□□□□□ -2.36
UPK3BQ9BT76 RNU6-1278P-201ENST00000516130 107 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 Y_RNA.683-201ENST00000516508 93 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 RNU6-1291P-201ENST00000516591 104 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 AC109810.1-201ENST00000534066 224 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 LRRC34P1-201ENST00000542742 915 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 AC145350.1-201ENST00000567426 208 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 AC011712.1-201ENST00000588959 234 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 RNU6-89P-201ENST00000606519 100 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 AC019193.3-201ENST00000609144 554 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 AL136317.1-201ENST00000612653 226 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 AC007014.2-201ENST00000615581 479 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 SEPT14P17-201ENST00000617978 177 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 AL391262.2-201ENST00000622466 494 ntBASIC0.33□□□□□ -2.36
UPK3BQ9BT76 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.33□□□□□ -2.36
UPK3BQ9BT76 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
UPK3BQ9BT76 MIR103A2-201ENST00000362154 78 ntBASIC0.32□□□□□ -2.36
UPK3BQ9BT76 Y_RNA.336-201ENST00000365307 109 ntBASIC0.32□□□□□ -2.36
UPK3BQ9BT76 Y_RNA.373-201ENST00000365600 103 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms