Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 SNORA72-201ENST00000384339 132 ntBASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 RNA5SP511-201ENST00000410487 115 ntBASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 EEF1A1P41-201ENST00000414667 207 ntBASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 AL160236.1-201ENST00000556317 195 ntBASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 AC013412.1-201ENST00000610687 192 ntBASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.46□□□□□ -1.85
ZKSCAN3Q9BRR0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
ZKSCAN3Q9BRR0 RNU6-1082P-201ENST00000364574 107 ntBASIC3.46□□□□□ -1.86
ZKSCAN3Q9BRR0 RNU6-418P-201ENST00000384035 107 ntBASIC3.46□□□□□ -1.86
ZKSCAN3Q9BRR0 Y_RNA.584-201ENST00000391090 114 ntBASIC3.46□□□□□ -1.86
ZKSCAN3Q9BRR0 RNA5SP274-201ENST00000410484 108 ntBASIC3.46□□□□□ -1.86
ZKSCAN3Q9BRR0 RNA5SP293-201ENST00000410527 113 ntBASIC3.46□□□□□ -1.86
ZKSCAN3Q9BRR0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.46□□□□□ -1.86
ZKSCAN3Q9BRR0 MICF-203ENST00000432679 129 ntBASIC3.46□□□□□ -1.86
ZKSCAN3Q9BRR0 RPS27P22-201ENST00000478056 241 ntBASIC3.46□□□□□ -1.86
ZKSCAN3Q9BRR0 RN7SL633P-201ENST00000488974 297 ntBASIC3.46□□□□□ -1.86
ZKSCAN3Q9BRR0 SCGB1D5P-201ENST00000515134 247 ntBASIC3.46□□□□□ -1.86
ZKSCAN3Q9BRR0 AC090049.2-201ENST00000550377 109 ntBASIC3.46□□□□□ -1.86
ZKSCAN3Q9BRR0 AC023043.3-201ENST00000593113 385 ntBASIC3.46□□□□□ -1.86
ZKSCAN3Q9BRR0 AL137790.1-201ENST00000634283 177 ntBASIC3.46□□□□□ -1.86
ZKSCAN3Q9BRR0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ZKSCAN3Q9BRR0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.45□□□□□ -1.86
ZKSCAN3Q9BRR0 AC110774.1-201ENST00000623567 2018 ntBASIC3.45□□□□□ -1.86
ZKSCAN3Q9BRR0 RNY1P11-201ENST00000363759 113 ntBASIC3.45□□□□□ -1.86
ZKSCAN3Q9BRR0 SNORA25.7-201ENST00000364375 127 ntBASIC3.45□□□□□ -1.86
ZKSCAN3Q9BRR0 RPL30P4-201ENST00000429309 333 ntBASIC3.45□□□□□ -1.86
ZKSCAN3Q9BRR0 AL139132.1-201ENST00000431587 344 ntBASIC3.45□□□□□ -1.86
ZKSCAN3Q9BRR0 UQCRHP3-201ENST00000451503 251 ntBASIC3.45□□□□□ -1.86
ZKSCAN3Q9BRR0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.45□□□□□ -1.86
ZKSCAN3Q9BRR0 RN7SL75P-201ENST00000461926 281 ntBASIC3.45□□□□□ -1.86
ZKSCAN3Q9BRR0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.45□□□□□ -1.86
ZKSCAN3Q9BRR0 RNU6-1299P-201ENST00000516316 100 ntBASIC3.45□□□□□ -1.86
ZKSCAN3Q9BRR0 AC068657.1-201ENST00000520807 306 ntBASIC3.45□□□□□ -1.86
ZKSCAN3Q9BRR0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.45□□□□□ -1.86
ZKSCAN3Q9BRR0 MIR7157-201ENST00000635801 60 ntBASIC3.45□□□□□ -1.86
ZKSCAN3Q9BRR0 AC093908.1-201ENST00000623125 8092 ntBASIC3.45□□□□□ -1.86
ZKSCAN3Q9BRR0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 RNU6-525P-201ENST00000363685 104 ntBASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 RNU6-484P-201ENST00000384016 107 ntBASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 U6atac.2-201ENST00000408644 118 ntBASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 AC016909.1-201ENST00000415916 166 ntBASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 AC080013.2-201ENST00000460866 323 ntBASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 AC245166.1-201ENST00000521012 253 ntBASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 Y_RNA.757-201ENST00000578934 114 ntBASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 MIR2681-201ENST00000581814 105 ntBASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 AL049861.1-201ENST00000603130 150 ntBASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 AL033523.1-201ENST00000605153 153 ntBASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 AC002064.3-201ENST00000623448 346 ntBASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 AC006386.2-201ENST00000624491 75 ntBASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 AC012005.1-201ENST00000624575 75 ntBASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
ZKSCAN3Q9BRR0 RPL21P3-201ENST00000395517 478 ntBASIC3.43□□□□□ -1.86
ZKSCAN3Q9BRR0 RNU2-52P-201ENST00000410680 190 ntBASIC3.43□□□□□ -1.86
ZKSCAN3Q9BRR0 HMGN2P18-201ENST00000450680 270 ntBASIC3.43□□□□□ -1.86
ZKSCAN3Q9BRR0 AC023449.1-201ENST00000454464 154 ntBASIC3.43□□□□□ -1.86
ZKSCAN3Q9BRR0 RAC1P5-201ENST00000512182 576 ntBASIC3.43□□□□□ -1.86
ZKSCAN3Q9BRR0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.43□□□□□ -1.86
ZKSCAN3Q9BRR0 AC090115.4-201ENST00000609970 188 ntBASIC3.43□□□□□ -1.86
ZKSCAN3Q9BRR0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.43□□□□□ -1.86
ZKSCAN3Q9BRR0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ZKSCAN3Q9BRR0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
ZKSCAN3Q9BRR0 MAPK10-322ENST00000641485 4530 ntBASIC3.43□□□□□ -1.86
ZKSCAN3Q9BRR0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ZKSCAN3Q9BRR0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ZKSCAN3Q9BRR0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZKSCAN3Q9BRR0 AC093831.2-201ENST00000624393 3427 ntBASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 Y_RNA.203-201ENST00000364106 102 ntBASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 RNU6-978P-201ENST00000364371 103 ntBASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 RNU7-107P-201ENST00000459121 61 ntBASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 AC090515.1-201ENST00000465295 476 ntBASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 RNA5SP153-201ENST00000516498 76 ntBASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 RNU6-965P-201ENST00000516721 96 ntBASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 SCARNA3-201ENST00000517097 143 ntBASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 RNA5SP490-201ENST00000517141 136 ntBASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 EIF4BP1-201ENST00000554881 351 ntBASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 MAPK10-362ENST00000641864 4484 ntBASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ZKSCAN3Q9BRR0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ZKSCAN3Q9BRR0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ZKSCAN3Q9BRR0 RNU1-22P-201ENST00000363334 158 ntBASIC3.41□□□□□ -1.86
ZKSCAN3Q9BRR0 RNU6-546P-201ENST00000383991 107 ntBASIC3.41□□□□□ -1.86
ZKSCAN3Q9BRR0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ZKSCAN3Q9BRR0 RNU6-1064P-201ENST00000410626 104 ntBASIC3.41□□□□□ -1.86
ZKSCAN3Q9BRR0 AC009969.1-201ENST00000438726 172 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 313.1 ms