Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 MIR4498-201ENST00000577599 66 ntBASIC2.08□□□□□ -2.08
CLSTN3Q9BQT9 AC002984.1-201ENST00000591692 448 ntBASIC2.08□□□□□ -2.08
CLSTN3Q9BQT9 AC008749.1-201ENST00000597650 306 ntBASIC2.08□□□□□ -2.08
CLSTN3Q9BQT9 AL355297.3-201ENST00000604082 446 ntBASIC2.08□□□□□ -2.08
CLSTN3Q9BQT9 AC011476.5-201ENST00000615594 130 ntBASIC2.08□□□□□ -2.08
CLSTN3Q9BQT9 AC004467.1-201ENST00000615678 330 ntBASIC2.08□□□□□ -2.08
CLSTN3Q9BQT9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLSTN3Q9BQT9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CLSTN3Q9BQT9 AC245060.5-201ENST00000610778 3293 ntBASIC2.07□□□□□ -2.08
CLSTN3Q9BQT9 snoU2-30.2-201ENST00000362805 70 ntBASIC2.07□□□□□ -2.08
CLSTN3Q9BQT9 RNU1-17P-201ENST00000363022 152 ntBASIC2.07□□□□□ -2.08
CLSTN3Q9BQT9 RNU6-271P-201ENST00000363858 105 ntBASIC2.07□□□□□ -2.08
CLSTN3Q9BQT9 RNU6-450P-201ENST00000364654 107 ntBASIC2.07□□□□□ -2.08
CLSTN3Q9BQT9 MIR606-201ENST00000384851 96 ntBASIC2.07□□□□□ -2.08
CLSTN3Q9BQT9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLSTN3Q9BQT9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.07□□□□□ -2.08
CLSTN3Q9BQT9 CST2P1-201ENST00000425770 87 ntBASIC2.07□□□□□ -2.08
CLSTN3Q9BQT9 RPEP5-201ENST00000441137 268 ntBASIC2.07□□□□□ -2.08
CLSTN3Q9BQT9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CLSTN3Q9BQT9 RNU6-1041P-201ENST00000516254 102 ntBASIC2.07□□□□□ -2.08
CLSTN3Q9BQT9 AL137100.2-201ENST00000555786 315 ntBASIC2.07□□□□□ -2.08
CLSTN3Q9BQT9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.07□□□□□ -2.08
CLSTN3Q9BQT9 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.07□□□□□ -2.08
CLSTN3Q9BQT9 SNORD114-7-201ENST00000362520 77 ntBASIC2.06□□□□□ -2.08
CLSTN3Q9BQT9 RNU6-961P-201ENST00000363893 105 ntBASIC2.06□□□□□ -2.08
CLSTN3Q9BQT9 SNORA63C-201ENST00000364578 129 ntBASIC2.06□□□□□ -2.08
CLSTN3Q9BQT9 RNA5SP138-201ENST00000365098 114 ntBASIC2.06□□□□□ -2.08
CLSTN3Q9BQT9 SNORD63-201ENST00000384262 68 ntBASIC2.06□□□□□ -2.08
CLSTN3Q9BQT9 RNU6-1160P-201ENST00000384546 104 ntBASIC2.06□□□□□ -2.08
CLSTN3Q9BQT9 Y_RNA.527-201ENST00000384573 102 ntBASIC2.06□□□□□ -2.08
CLSTN3Q9BQT9 MIR597-201ENST00000384968 97 ntBASIC2.06□□□□□ -2.08
CLSTN3Q9BQT9 RNA5SP450-201ENST00000411206 102 ntBASIC2.06□□□□□ -2.08
CLSTN3Q9BQT9 RNU6-1143P-201ENST00000516125 104 ntBASIC2.06□□□□□ -2.08
CLSTN3Q9BQT9 RNU6-764P-201ENST00000516396 105 ntBASIC2.06□□□□□ -2.08
CLSTN3Q9BQT9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLSTN3Q9BQT9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.06□□□□□ -2.08
CLSTN3Q9BQT9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 WWP1P1-201ENST00000466609 2769 ntBASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 Y_RNA.183-201ENST00000363882 113 ntBASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 Y_RNA.226-201ENST00000364337 114 ntBASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 SNORA48.1-201ENST00000390879 135 ntBASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 RNU6-985P-201ENST00000410182 104 ntBASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 AC113618.1-201ENST00000416747 285 ntBASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 AL445685.2-201ENST00000422551 342 ntBASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 HMGN2P34-201ENST00000437647 269 ntBASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 AC073910.1-201ENST00000445047 438 ntBASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 SNORA70.12-201ENST00000516084 153 ntBASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 MIR514B-201ENST00000516774 80 ntBASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 SNORA40.15-201ENST00000516884 107 ntBASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 AL021879.1-201ENST00000611756 288 ntBASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 MIR338-201ENST00000636369 67 ntBASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
CLSTN3Q9BQT9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLSTN3Q9BQT9 RNU1-96P-201ENST00000364163 162 ntBASIC2.04□□□□□ -2.08
CLSTN3Q9BQT9 Y_RNA.276-201ENST00000364732 109 ntBASIC2.04□□□□□ -2.08
CLSTN3Q9BQT9 RNA5SP212-201ENST00000391223 107 ntBASIC2.04□□□□□ -2.08
CLSTN3Q9BQT9 RNU2-54P-201ENST00000410299 190 ntBASIC2.04□□□□□ -2.08
CLSTN3Q9BQT9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.04□□□□□ -2.08
CLSTN3Q9BQT9 AC005002.2-201ENST00000438228 269 ntBASIC2.04□□□□□ -2.08
CLSTN3Q9BQT9 AC003989.2-201ENST00000440224 169 ntBASIC2.04□□□□□ -2.08
CLSTN3Q9BQT9 AC069257.2-201ENST00000441819 155 ntBASIC2.04□□□□□ -2.08
CLSTN3Q9BQT9 AL118496.2-201ENST00000448300 230 ntBASIC2.04□□□□□ -2.08
CLSTN3Q9BQT9 SNORD65B-201ENST00000459126 73 ntBASIC2.04□□□□□ -2.08
CLSTN3Q9BQT9 AC024995.1-201ENST00000523014 93 ntBASIC2.04□□□□□ -2.08
CLSTN3Q9BQT9 CENPCP1-201ENST00000533085 2578 ntBASIC2.04□□□□□ -2.08
CLSTN3Q9BQT9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.04□□□□□ -2.08
CLSTN3Q9BQT9 AC011373.1-201ENST00000607270 237 ntBASIC2.04□□□□□ -2.08
CLSTN3Q9BQT9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 Y_RNA.162-201ENST00000363683 102 ntBASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 Y_RNA.243-201ENST00000364481 109 ntBASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 RNU6-738P-201ENST00000384531 106 ntBASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 AL512604.1-201ENST00000404812 257 ntBASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 AL355497.1-201ENST00000406262 551 ntBASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 AC016909.1-201ENST00000415916 166 ntBASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 RPL23AP63-201ENST00000498752 471 ntBASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 AC113195.1-201ENST00000579952 141 ntBASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 MIR4423-201ENST00000580922 80 ntBASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 AC069114.2-201ENST00000604699 304 ntBASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 AL360085.1-201ENST00000604713 532 ntBASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 AC022441.3-201ENST00000605737 136 ntBASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 AC091932.3-201ENST00000624223 323 ntBASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.03□□□□□ -2.08
CLSTN3Q9BQT9 RNU6-862P-201ENST00000362804 105 ntBASIC2.02□□□□□ -2.09
CLSTN3Q9BQT9 RNA5SP160-201ENST00000364866 120 ntBASIC2.02□□□□□ -2.09
CLSTN3Q9BQT9 RNU6-1175P-201ENST00000365200 107 ntBASIC2.02□□□□□ -2.09
CLSTN3Q9BQT9 Y_RNA.570-201ENST00000384750 101 ntBASIC2.02□□□□□ -2.09
CLSTN3Q9BQT9 RNA5SP501-201ENST00000410990 112 ntBASIC2.02□□□□□ -2.09
CLSTN3Q9BQT9 AL158823.1-201ENST00000418441 478 ntBASIC2.02□□□□□ -2.09
CLSTN3Q9BQT9 RPL23AP7-203ENST00000449021 469 ntBASIC2.02□□□□□ -2.09
CLSTN3Q9BQT9 AC005042.3-201ENST00000453230 174 ntBASIC2.02□□□□□ -2.09
CLSTN3Q9BQT9 RNU1-142P-201ENST00000516682 145 ntBASIC2.02□□□□□ -2.09
CLSTN3Q9BQT9 RNU2-12P-201ENST00000517216 168 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms