Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RNU1-96P-201ENST00000364163 162 ntBASIC2.43□□□□□ -2.02
VRK1Q99986 Y_RNA.287-201ENST00000364853 94 ntBASIC2.43□□□□□ -2.02
VRK1Q99986 RNU2-14P-201ENST00000411053 191 ntBASIC2.43□□□□□ -2.02
VRK1Q99986 RPS27P22-201ENST00000478056 241 ntBASIC2.43□□□□□ -2.02
VRK1Q99986 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.43□□□□□ -2.02
VRK1Q99986 RNU6-1041P-201ENST00000516254 102 ntBASIC2.43□□□□□ -2.02
VRK1Q99986 AC027419.1-201ENST00000522976 328 ntBASIC2.43□□□□□ -2.02
VRK1Q99986 AC006023.1-201ENST00000603944 259 ntBASIC2.43□□□□□ -2.02
VRK1Q99986 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.43□□□□□ -2.02
VRK1Q99986 snoU18.1-201ENST00000629629 71 ntBASIC2.43□□□□□ -2.02
VRK1Q99986 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
VRK1Q99986 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VRK1Q99986 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
VRK1Q99986 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
VRK1Q99986 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.42□□□□□ -2.02
VRK1Q99986 RNU6-23P-201ENST00000363283 107 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 RNU1-22P-201ENST00000363334 158 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 RNU6-117P-201ENST00000365415 107 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 MIR196B-201ENST00000384852 84 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 AL117342.1-201ENST00000404861 406 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 AL139156.1-201ENST00000412785 841 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.42□□□□□ -2.02
VRK1Q99986 OOSP1P1-201ENST00000423265 274 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.42□□□□□ -2.02
VRK1Q99986 AL109933.2-201ENST00000452651 260 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 Y_RNA.637-201ENST00000459424 114 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 COX6CP14-201ENST00000469580 174 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.42□□□□□ -2.02
VRK1Q99986 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.42□□□□□ -2.02
VRK1Q99986 RN7SKP132-201ENST00000516001 208 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 Y_RNA.679-201ENST00000516416 91 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 RNU1-104P-201ENST00000517280 175 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 MIR4513-201ENST00000581077 86 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 MIR4438-201ENST00000585271 93 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 AL442067.1-201ENST00000613261 223 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.42□□□□□ -2.02
VRK1Q99986 AC073349.3-201ENST00000617616 186 ntBASIC2.42□□□□□ -2.02
VRK1Q99986 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VRK1Q99986 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VRK1Q99986 AC096644.4-201ENST00000563417 2912 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
VRK1Q99986 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VRK1Q99986 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
VRK1Q99986 SNORA25.6-201ENST00000364121 118 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 SNORA72.4-201ENST00000384174 132 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 RNU1-52P-201ENST00000384190 164 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 RNU6-417P-201ENST00000384712 107 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 MIR515-2-201ENST00000384883 83 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 MIR515-1-201ENST00000384884 83 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 RNU6-763P-201ENST00000390865 106 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 RNU6-651P-201ENST00000411040 105 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 RNA5SP184-201ENST00000411071 108 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 RPS20P10-201ENST00000451209 253 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 Y_RNA.638-201ENST00000459374 113 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 RPL23AP94-201ENST00000512518 302 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 AC097462.1-201ENST00000514125 324 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 RNA5SP82-201ENST00000516707 92 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 MIR4319-201ENST00000577285 85 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 MIR3668-201ENST00000582138 75 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 MIR5194-201ENST00000582634 120 ntBASIC2.41□□□□□ -2.02
VRK1Q99986 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VRK1Q99986 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.02
VRK1Q99986 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VRK1Q99986 MIR26A1-201ENST00000362205 77 ntBASIC2.4□□□□□ -2.03
VRK1Q99986 Y_RNA.292-201ENST00000364904 97 ntBASIC2.4□□□□□ -2.03
VRK1Q99986 RNY4P28-201ENST00000365281 93 ntBASIC2.4□□□□□ -2.03
VRK1Q99986 HMGN2P39-201ENST00000398005 273 ntBASIC2.4□□□□□ -2.03
VRK1Q99986 CST2P1-201ENST00000425770 87 ntBASIC2.4□□□□□ -2.03
VRK1Q99986 AC018634.1-201ENST00000437554 401 ntBASIC2.4□□□□□ -2.03
VRK1Q99986 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.4□□□□□ -2.03
VRK1Q99986 RNU6-1278P-201ENST00000516130 107 ntBASIC2.4□□□□□ -2.03
VRK1Q99986 RNU7-172P-201ENST00000517125 64 ntBASIC2.4□□□□□ -2.03
VRK1Q99986 AC005786.1-201ENST00000588553 154 ntBASIC2.4□□□□□ -2.03
VRK1Q99986 AC007229.1-201ENST00000590455 412 ntBASIC2.4□□□□□ -2.03
VRK1Q99986 AC011921.3-201ENST00000605540 361 ntBASIC2.4□□□□□ -2.03
VRK1Q99986 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VRK1Q99986 AC007336.1-201ENST00000576365 3828 ntBASIC2.4□□□□□ -2.03
VRK1Q99986 ZNF271P-202ENST00000465539 1970 ntBASIC2.4□□□□□ -2.03
VRK1Q99986 AL136360.1-201ENST00000503377 1900 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 AL356292.1-201ENST00000283110 373 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 SNORD115-3-201ENST00000363100 82 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 Y_RNA.172-201ENST00000363765 102 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 RNU6-200P-201ENST00000364743 107 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 DEFA7P-201ENST00000382676 285 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 RNU6-211P-201ENST00000384047 107 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 SNORA26.5-201ENST00000391215 123 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 RNU11-5P-201ENST00000391216 129 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 EBAG9P1-201ENST00000418955 543 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 BTF3P11-201ENST00000426582 477 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 SNORD109B-201ENST00000458961 67 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 SNORD109A-201ENST00000459128 67 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.39□□□□□ -2.03
VRK1Q99986 RNU7-99P-201ENST00000516271 62 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 AC079600.2-201ENST00000550076 130 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.39□□□□□ -2.03
VRK1Q99986 AC004832.4-201ENST00000608952 331 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 AL008718.3-201ENST00000610217 321 ntBASIC2.39□□□□□ -2.03
VRK1Q99986 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms