Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.85□□□□□ -2.11
PKP2Q99959 AC009237.7-201ENST00000447357 229 ntBASIC1.85□□□□□ -2.11
PKP2Q99959 HMGN2P18-201ENST00000450680 270 ntBASIC1.85□□□□□ -2.11
PKP2Q99959 PCNPP5-201ENST00000452246 481 ntBASIC1.85□□□□□ -2.11
PKP2Q99959 RNU6-344P-201ENST00000516635 111 ntBASIC1.85□□□□□ -2.11
PKP2Q99959 RRN3P3-201ENST00000549207 578 ntBASIC1.85□□□□□ -2.11
PKP2Q99959 AL161670.1-201ENST00000554348 137 ntBASIC1.85□□□□□ -2.11
PKP2Q99959 MIR4713-201ENST00000582691 75 ntBASIC1.85□□□□□ -2.11
PKP2Q99959 MIR5006-201ENST00000583027 110 ntBASIC1.85□□□□□ -2.11
PKP2Q99959 MIR3149-201ENST00000584629 83 ntBASIC1.85□□□□□ -2.11
PKP2Q99959 AP000942.3-201ENST00000603702 160 ntBASIC1.85□□□□□ -2.11
PKP2Q99959 RPL17P51-201ENST00000605218 238 ntBASIC1.85□□□□□ -2.11
PKP2Q99959 U4.1-201ENST00000620349 87 ntBASIC1.85□□□□□ -2.11
PKP2Q99959 MIR8062-201ENST00000621515 85 ntBASIC1.85□□□□□ -2.11
PKP2Q99959 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
PKP2Q99959 AL356292.1-201ENST00000283110 373 ntBASIC1.84□□□□□ -2.11
PKP2Q99959 RNU6-727P-201ENST00000363592 107 ntBASIC1.84□□□□□ -2.11
PKP2Q99959 RNU6-961P-201ENST00000363893 105 ntBASIC1.84□□□□□ -2.11
PKP2Q99959 Y_RNA.193-201ENST00000363979 102 ntBASIC1.84□□□□□ -2.11
PKP2Q99959 RNU6-713P-201ENST00000384761 107 ntBASIC1.84□□□□□ -2.11
PKP2Q99959 SNORD115-46-201ENST00000390982 71 ntBASIC1.84□□□□□ -2.11
PKP2Q99959 RNA5SP504-201ENST00000410676 117 ntBASIC1.84□□□□□ -2.11
PKP2Q99959 ELOCP21-201ENST00000412558 336 ntBASIC1.84□□□□□ -2.11
PKP2Q99959 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.84□□□□□ -2.11
PKP2Q99959 AC074133.1-201ENST00000515696 183 ntBASIC1.84□□□□□ -2.11
PKP2Q99959 CYCSP23-201ENST00000519781 313 ntBASIC1.84□□□□□ -2.11
PKP2Q99959 AP003733.2-201ENST00000529409 171 ntBASIC1.84□□□□□ -2.11
PKP2Q99959 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.84□□□□□ -2.11
PKP2Q99959 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.84□□□□□ -2.11
PKP2Q99959 MIR4300-201ENST00000581016 96 ntBASIC1.84□□□□□ -2.11
PKP2Q99959 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.84□□□□□ -2.11
PKP2Q99959 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.84□□□□□ -2.11
PKP2Q99959 LINC02555-201ENST00000563933 1951 ntBASIC1.84□□□□□ -2.11
PKP2Q99959 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
PKP2Q99959 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
PKP2Q99959 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PKP2Q99959 RNA5SP493-201ENST00000364115 91 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 Y_RNA.396-201ENST00000383949 103 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 Y_RNA.415-201ENST00000384012 112 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 RNU6-472P-201ENST00000384299 107 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 SNORA67.2-201ENST00000384300 149 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 RNU6-937P-201ENST00000384325 106 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 Y_RNA.556-201ENST00000384677 113 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 SNORA11.4-201ENST00000408823 129 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 RNU2-20P-201ENST00000410425 191 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 RPL21P38-201ENST00000418090 167 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 AC005002.2-201ENST00000438228 269 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.83□□□□□ -2.12
PKP2Q99959 UQCRBP2-201ENST00000447827 297 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 AC098869.1-201ENST00000481627 292 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 RNU6-408P-201ENST00000515910 100 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 RNU6-1098P-201ENST00000516772 96 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.83□□□□□ -2.12
PKP2Q99959 AC018448.1-201ENST00000552843 316 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 AC004817.2-201ENST00000561794 651 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 MIR4423-201ENST00000580922 80 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 MIR4781-201ENST00000585250 76 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 SNORD11B-201ENST00000607707 90 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 Y_RNA.783-201ENST00000613546 102 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 MIR376A1-201ENST00000616574 68 ntBASIC1.83□□□□□ -2.12
PKP2Q99959 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PKP2Q99959 RNU6-626P-201ENST00000363354 107 ntBASIC1.82□□□□□ -2.12
PKP2Q99959 Y_RNA.332-201ENST00000365271 113 ntBASIC1.82□□□□□ -2.12
PKP2Q99959 Y_RNA.376-201ENST00000365638 108 ntBASIC1.82□□□□□ -2.12
PKP2Q99959 RNU6-20P-201ENST00000384106 107 ntBASIC1.82□□□□□ -2.12
PKP2Q99959 SNORD63-201ENST00000384262 68 ntBASIC1.82□□□□□ -2.12
PKP2Q99959 Y_RNA.462-201ENST00000384268 102 ntBASIC1.82□□□□□ -2.12
PKP2Q99959 RNU6-505P-201ENST00000384427 107 ntBASIC1.82□□□□□ -2.12
PKP2Q99959 Y_RNA.508-201ENST00000384502 114 ntBASIC1.82□□□□□ -2.12
PKP2Q99959 MT-TW-201ENST00000387382 68 ntBASIC1.82□□□□□ -2.12
PKP2Q99959 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.82□□□□□ -2.12
PKP2Q99959 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.82□□□□□ -2.12
PKP2Q99959 RNU6-625P-201ENST00000459412 107 ntBASIC1.82□□□□□ -2.12
PKP2Q99959 RPS23P5-201ENST00000495419 428 ntBASIC1.82□□□□□ -2.12
PKP2Q99959 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.82□□□□□ -2.12
PKP2Q99959 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.82□□□□□ -2.12
PKP2Q99959 AK6P2-201ENST00000549020 471 ntBASIC1.82□□□□□ -2.12
PKP2Q99959 AL590240.4-201ENST00000616908 390 ntBASIC1.82□□□□□ -2.12
PKP2Q99959 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.82□□□□□ -2.12
PKP2Q99959 AC068205.3-201ENST00000636385 468 ntBASIC1.82□□□□□ -2.12
PKP2Q99959 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.82□□□□□ -2.12
PKP2Q99959 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
PKP2Q99959 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PKP2Q99959 snoU2_19.2-201ENST00000363024 80 ntBASIC1.81□□□□□ -2.12
PKP2Q99959 SNORD87-201ENST00000364849 89 ntBASIC1.81□□□□□ -2.12
PKP2Q99959 RNU6-702P-201ENST00000364982 107 ntBASIC1.81□□□□□ -2.12
PKP2Q99959 RNU6-438P-201ENST00000365561 103 ntBASIC1.81□□□□□ -2.12
PKP2Q99959 Y_RNA.461-201ENST00000384263 103 ntBASIC1.81□□□□□ -2.12
PKP2Q99959 Y_RNA.498-201ENST00000384460 102 ntBASIC1.81□□□□□ -2.12
PKP2Q99959 MIR215-201ENST00000384858 110 ntBASIC1.81□□□□□ -2.12
PKP2Q99959 SNORA48.1-201ENST00000390879 135 ntBASIC1.81□□□□□ -2.12
PKP2Q99959 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.81□□□□□ -2.12
PKP2Q99959 HMGB3P17-201ENST00000504195 649 ntBASIC1.81□□□□□ -2.12
PKP2Q99959 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.81□□□□□ -2.12
PKP2Q99959 Y_RNA.668-201ENST00000516233 93 ntBASIC1.81□□□□□ -2.12
PKP2Q99959 RNU5F-4P-201ENST00000516581 114 ntBASIC1.81□□□□□ -2.12
PKP2Q99959 AC087441.2-201ENST00000529141 262 ntBASIC1.81□□□□□ -2.12
PKP2Q99959 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.81□□□□□ -2.12
PKP2Q99959 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms