Protein–RNA interactions for Protein: Q96NJ6

ZFP3, Zinc finger protein 3 homolog, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP3Q96NJ6 APOOP3-201ENST00000536787 586 ntBASIC0.82□□□□□ -2.28
ZFP3Q96NJ6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.82□□□□□ -2.28
ZFP3Q96NJ6 AC012557.2-201ENST00000605919 418 ntBASIC0.82□□□□□ -2.28
ZFP3Q96NJ6 AC100810.6-201ENST00000638068 285 ntBASIC0.82□□□□□ -2.28
ZFP3Q96NJ6 Y_RNA.3-201ENST00000362331 103 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 RNU6-1059P-201ENST00000363752 98 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 Y_RNA.295-201ENST00000364918 102 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 RNU4-12P-201ENST00000365233 139 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 RNU6-440P-201ENST00000390882 105 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 SNORD65B-201ENST00000459126 73 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 SCARNA16.2-201ENST00000516520 172 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 Y_RNA.706-201ENST00000516933 99 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 RNU6-273P-201ENST00000516937 96 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 SUMO2P16-201ENST00000519475 264 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 AC091144.1-201ENST00000519573 138 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 AC011604.1-201ENST00000545978 196 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 MIR5695-201ENST00000579717 85 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 MIR4438-201ENST00000585271 93 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 AL162424.1-201ENST00000602325 221 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 AC100812.1-201ENST00000607622 580 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 MIR6734-201ENST00000621166 68 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 MIR3662-201ENST00000637030 95 ntBASIC0.81□□□□□ -2.28
ZFP3Q96NJ6 AC018630.2-201ENST00000534866 2403 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 Y_RNA.118-201ENST00000363300 101 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 RNU6-281P-201ENST00000384212 103 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 RNU6-842P-201ENST00000384269 107 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 AL034345.1-201ENST00000407768 123 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 POLR2J4-204ENST00000418424 324 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 AL139396.1-201ENST00000421137 167 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 USP9YP16-201ENST00000430287 407 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 USP9YP30-201ENST00000430729 455 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 USP9YP23-201ENST00000455085 407 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 RPS29P1-201ENST00000465274 159 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 RNU6-165P-201ENST00000517170 99 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 AC108706.1-201ENST00000611053 297 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 AL021879.1-201ENST00000611756 288 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 RMST_2.1-201ENST00000617263 136 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 AC073349.3-201ENST00000617616 186 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 MIR3688-2-201ENST00000636963 87 ntBASIC0.8□□□□□ -2.28
ZFP3Q96NJ6 MIR373-201ENST00000362273 69 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 Y_RNA.301-201ENST00000364990 103 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 RNU1-36P-201ENST00000365130 165 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 RNU6-505P-201ENST00000384427 107 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 Y_RNA.516-201ENST00000384541 124 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 MIR19B1-201ENST00000384829 87 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 MIR660-201ENST00000385235 97 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 AC092991.1-201ENST00000477176 376 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 AC010598.1-201ENST00000510378 103 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 AC097462.1-201ENST00000514125 324 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 ACA64.5-201ENST00000516207 127 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 AC093023.1-201ENST00000547375 507 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 MIR5701-3-201ENST00000578890 82 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 MIR3684-201ENST00000579779 74 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 MIR5701-1-201ENST00000585138 82 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 AC125232.2-201ENST00000592457 143 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 AC090517.2-201ENST00000614966 680 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 MIR6128-201ENST00000615528 109 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 MIR5701-2-201ENST00000615634 82 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.79□□□□□ -2.28
ZFP3Q96NJ6 RNU6-222P-201ENST00000362438 107 ntBASIC0.78□□□□□ -2.28
ZFP3Q96NJ6 RNU6-1264P-201ENST00000383891 107 ntBASIC0.78□□□□□ -2.28
ZFP3Q96NJ6 SNORD116-4-201ENST00000384733 96 ntBASIC0.78□□□□□ -2.28
ZFP3Q96NJ6 MIR548J-201ENST00000408833 112 ntBASIC0.78□□□□□ -2.28
ZFP3Q96NJ6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.78□□□□□ -2.28
ZFP3Q96NJ6 MTCO3P19-201ENST00000415864 321 ntBASIC0.78□□□□□ -2.28
ZFP3Q96NJ6 AC004941.2-201ENST00000427009 228 ntBASIC0.78□□□□□ -2.28
ZFP3Q96NJ6 EIF1P2-201ENST00000428233 350 ntBASIC0.78□□□□□ -2.28
ZFP3Q96NJ6 RPS27P22-201ENST00000478056 241 ntBASIC0.78□□□□□ -2.28
ZFP3Q96NJ6 MTND5P5-201ENST00000503764 376 ntBASIC0.78□□□□□ -2.28
ZFP3Q96NJ6 AC046134.1-201ENST00000514454 666 ntBASIC0.78□□□□□ -2.28
ZFP3Q96NJ6 CBX3P8-201ENST00000532412 525 ntBASIC0.78□□□□□ -2.28
ZFP3Q96NJ6 AL121579.1-201ENST00000555129 305 ntBASIC0.78□□□□□ -2.28
ZFP3Q96NJ6 AC090617.3-201ENST00000573670 475 ntBASIC0.78□□□□□ -2.28
ZFP3Q96NJ6 MIR4790-201ENST00000577799 79 ntBASIC0.78□□□□□ -2.28
ZFP3Q96NJ6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
ZFP3Q96NJ6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
ZFP3Q96NJ6 Y_RNA.106-201ENST00000363189 100 ntBASIC0.77□□□□□ -2.29
ZFP3Q96NJ6 RNU6-593P-201ENST00000364716 112 ntBASIC0.77□□□□□ -2.29
ZFP3Q96NJ6 Y_RNA.318-201ENST00000365131 97 ntBASIC0.77□□□□□ -2.29
ZFP3Q96NJ6 Y_RNA.453-201ENST00000384223 109 ntBASIC0.77□□□□□ -2.29
ZFP3Q96NJ6 RNU6-1001P-201ENST00000411265 100 ntBASIC0.77□□□□□ -2.29
ZFP3Q96NJ6 AL589823.1-201ENST00000429577 183 ntBASIC0.77□□□□□ -2.29
ZFP3Q96NJ6 AC010469.2-201ENST00000496412 480 ntBASIC0.77□□□□□ -2.29
ZFP3Q96NJ6 RNU4-49P-201ENST00000516080 140 ntBASIC0.77□□□□□ -2.29
ZFP3Q96NJ6 RNU6-1016P-201ENST00000516689 94 ntBASIC0.77□□□□□ -2.29
ZFP3Q96NJ6 AC105029.1-201ENST00000520250 669 ntBASIC0.77□□□□□ -2.29
ZFP3Q96NJ6 AC023157.2-201ENST00000540596 141 ntBASIC0.77□□□□□ -2.29
ZFP3Q96NJ6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.77□□□□□ -2.29
ZFP3Q96NJ6 AL513534.2-201ENST00000603836 250 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms