Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 uc_338.16-201ENST00000621804 95 ntBASIC-0.25□□□□□ -2.45
CCDC42Q96M95 RNU6-873P-201ENST00000363833 107 ntBASIC-0.26□□□□□ -2.45
CCDC42Q96M95 AC117470.1-201ENST00000381974 330 ntBASIC-0.26□□□□□ -2.45
CCDC42Q96M95 RNA5SP63-201ENST00000391225 112 ntBASIC-0.26□□□□□ -2.45
CCDC42Q96M95 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.26□□□□□ -2.45
CCDC42Q96M95 SEPT7P4-201ENST00000437076 306 ntBASIC-0.26□□□□□ -2.45
CCDC42Q96M95 MIR2115-201ENST00000516657 100 ntBASIC-0.26□□□□□ -2.45
CCDC42Q96M95 SNORA18.7-201ENST00000516910 131 ntBASIC-0.26□□□□□ -2.45
CCDC42Q96M95 RNA5SP94-201ENST00000516917 108 ntBASIC-0.26□□□□□ -2.45
CCDC42Q96M95 MTND2P38-201ENST00000522536 667 ntBASIC-0.26□□□□□ -2.45
CCDC42Q96M95 AC104576.1-201ENST00000524225 88 ntBASIC-0.26□□□□□ -2.45
CCDC42Q96M95 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.26□□□□□ -2.45
CCDC42Q96M95 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.26□□□□□ -2.45
CCDC42Q96M95 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
CCDC42Q96M95 MIR330-201ENST00000362196 94 ntBASIC-0.27□□□□□ -2.45
CCDC42Q96M95 RNU6-456P-201ENST00000384493 107 ntBASIC-0.27□□□□□ -2.45
CCDC42Q96M95 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.27□□□□□ -2.45
CCDC42Q96M95 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.27□□□□□ -2.45
CCDC42Q96M95 AP002963.1-201ENST00000530590 184 ntBASIC-0.27□□□□□ -2.45
CCDC42Q96M95 ELOCP32-201ENST00000548625 324 ntBASIC-0.27□□□□□ -2.45
CCDC42Q96M95 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.27□□□□□ -2.45
CCDC42Q96M95 CPDP1-201ENST00000579660 283 ntBASIC-0.27□□□□□ -2.45
CCDC42Q96M95 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.27□□□□□ -2.45
CCDC42Q96M95 TUSC7.1-201ENST00000610969 165 ntBASIC-0.27□□□□□ -2.45
CCDC42Q96M95 AC087683.2-201ENST00000611384 326 ntBASIC-0.27□□□□□ -2.45
CCDC42Q96M95 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.27□□□□□ -2.45
CCDC42Q96M95 AC009161.2-201ENST00000624626 138 ntBASIC-0.27□□□□□ -2.45
CCDC42Q96M95 SNORD115-32-201ENST00000364079 82 ntBASIC-0.28□□□□□ -2.45
CCDC42Q96M95 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.28□□□□□ -2.45
CCDC42Q96M95 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.28□□□□□ -2.45
CCDC42Q96M95 RNU6-700P-201ENST00000391043 107 ntBASIC-0.28□□□□□ -2.45
CCDC42Q96M95 RNA5SP496-201ENST00000391240 109 ntBASIC-0.28□□□□□ -2.45
CCDC42Q96M95 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.28□□□□□ -2.45
CCDC42Q96M95 AC018865.2-201ENST00000423631 129 ntBASIC-0.28□□□□□ -2.45
CCDC42Q96M95 AL009048.1-201ENST00000450437 298 ntBASIC-0.28□□□□□ -2.45
CCDC42Q96M95 RNU7-180P-201ENST00000459240 63 ntBASIC-0.28□□□□□ -2.45
CCDC42Q96M95 AC091885.1-201ENST00000506658 268 ntBASIC-0.28□□□□□ -2.45
CCDC42Q96M95 RNA5SP20-201ENST00000515976 84 ntBASIC-0.28□□□□□ -2.45
CCDC42Q96M95 AC091144.1-201ENST00000519573 138 ntBASIC-0.28□□□□□ -2.45
CCDC42Q96M95 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.28□□□□□ -2.45
CCDC42Q96M95 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.28□□□□□ -2.45
CCDC42Q96M95 AC245014.2-201ENST00000603689 287 ntBASIC-0.28□□□□□ -2.45
CCDC42Q96M95 AC246785.4-201ENST00000605374 287 ntBASIC-0.28□□□□□ -2.45
CCDC42Q96M95 AC104260.1-201ENST00000616660 539 ntBASIC-0.28□□□□□ -2.45
CCDC42Q96M95 MIR4251-201ENST00000635819 61 ntBASIC-0.28□□□□□ -2.45
CCDC42Q96M95 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.28□□□□□ -2.45
CCDC42Q96M95 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
CCDC42Q96M95 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.29□□□□□ -2.46
CCDC42Q96M95 RNU6-517P-201ENST00000384362 110 ntBASIC-0.29□□□□□ -2.46
CCDC42Q96M95 MIR521-1-201ENST00000384902 87 ntBASIC-0.29□□□□□ -2.46
CCDC42Q96M95 AL590632.1-201ENST00000424289 371 ntBASIC-0.29□□□□□ -2.46
CCDC42Q96M95 AL356010.1-201ENST00000456364 102 ntBASIC-0.29□□□□□ -2.46
CCDC42Q96M95 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.29□□□□□ -2.46
CCDC42Q96M95 AC141557.1-201ENST00000540982 400 ntBASIC-0.29□□□□□ -2.46
CCDC42Q96M95 MIR3684-201ENST00000579779 74 ntBASIC-0.29□□□□□ -2.46
CCDC42Q96M95 MIR548AB-201ENST00000584917 84 ntBASIC-0.29□□□□□ -2.46
CCDC42Q96M95 AC011712.1-201ENST00000588959 234 ntBASIC-0.29□□□□□ -2.46
CCDC42Q96M95 HULC.1-201ENST00000612720 240 ntBASIC-0.29□□□□□ -2.46
CCDC42Q96M95 AP001506.1-201ENST00000615444 211 ntBASIC-0.29□□□□□ -2.46
CCDC42Q96M95 AL158209.2-201ENST00000619266 216 ntBASIC-0.29□□□□□ -2.46
CCDC42Q96M95 SNORD114-5-201ENST00000362928 70 ntBASIC-0.3□□□□□ -2.46
CCDC42Q96M95 SNORD68-201ENST00000363214 84 ntBASIC-0.3□□□□□ -2.46
CCDC42Q96M95 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.3□□□□□ -2.46
CCDC42Q96M95 U8.5-201ENST00000364528 136 ntBASIC-0.3□□□□□ -2.46
CCDC42Q96M95 RNU6-282P-201ENST00000365357 103 ntBASIC-0.3□□□□□ -2.46
CCDC42Q96M95 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.3□□□□□ -2.46
CCDC42Q96M95 SNORA8.2-201ENST00000384372 139 ntBASIC-0.3□□□□□ -2.46
CCDC42Q96M95 MIR513B-201ENST00000385136 84 ntBASIC-0.3□□□□□ -2.46
CCDC42Q96M95 RNU6-325P-201ENST00000411132 105 ntBASIC-0.3□□□□□ -2.46
CCDC42Q96M95 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
CCDC42Q96M95 SNORD123-201ENST00000459473 70 ntBASIC-0.3□□□□□ -2.46
CCDC42Q96M95 SNORA40.12-201ENST00000516329 111 ntBASIC-0.3□□□□□ -2.46
CCDC42Q96M95 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.3□□□□□ -2.46
CCDC42Q96M95 SNORA27.1-201ENST00000362604 124 ntBASIC-0.31□□□□□ -2.46
CCDC42Q96M95 SNORD114-26-201ENST00000363543 72 ntBASIC-0.31□□□□□ -2.46
CCDC42Q96M95 RNU6-280P-201ENST00000364145 104 ntBASIC-0.31□□□□□ -2.46
CCDC42Q96M95 RNU6-580P-201ENST00000365159 107 ntBASIC-0.31□□□□□ -2.46
CCDC42Q96M95 RNU6-407P-201ENST00000365280 104 ntBASIC-0.31□□□□□ -2.46
CCDC42Q96M95 SNORA75.6-201ENST00000391318 127 ntBASIC-0.31□□□□□ -2.46
CCDC42Q96M95 AL358176.2-201ENST00000425769 204 ntBASIC-0.31□□□□□ -2.46
CCDC42Q96M95 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.31□□□□□ -2.46
CCDC42Q96M95 AL359672.1-201ENST00000442302 409 ntBASIC-0.31□□□□□ -2.46
CCDC42Q96M95 AL137792.2-201ENST00000443484 235 ntBASIC-0.31□□□□□ -2.46
CCDC42Q96M95 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.31□□□□□ -2.46
CCDC42Q96M95 AC018710.1-201ENST00000506509 158 ntBASIC-0.31□□□□□ -2.46
CCDC42Q96M95 AC093303.1-201ENST00000514549 295 ntBASIC-0.31□□□□□ -2.46
CCDC42Q96M95 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.31□□□□□ -2.46
CCDC42Q96M95 MIR1273G-201ENST00000577677 100 ntBASIC-0.31□□□□□ -2.46
CCDC42Q96M95 MIR4762-201ENST00000585261 75 ntBASIC-0.31□□□□□ -2.46
CCDC42Q96M95 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.31□□□□□ -2.46
CCDC42Q96M95 SNORA32.1-201ENST00000364514 115 ntBASIC-0.32□□□□□ -2.46
CCDC42Q96M95 RNU4-9P-201ENST00000364951 139 ntBASIC-0.32□□□□□ -2.46
CCDC42Q96M95 RNU6-117P-201ENST00000365415 107 ntBASIC-0.32□□□□□ -2.46
CCDC42Q96M95 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.32□□□□□ -2.46
CCDC42Q96M95 MIR153-2-201ENST00000385225 87 ntBASIC-0.32□□□□□ -2.46
CCDC42Q96M95 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.32□□□□□ -2.46
CCDC42Q96M95 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.32□□□□□ -2.46
CCDC42Q96M95 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.32□□□□□ -2.46
CCDC42Q96M95 CCDC34P1-201ENST00000507441 517 ntBASIC-0.32□□□□□ -2.46
CCDC42Q96M95 AC092436.3-201ENST00000511788 257 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 7.3 ms