Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.72□□□□□ -2.13
PDLIM5Q96HC4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 Y_RNA.145-201ENST00000363527 102 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 RNU6-112P-201ENST00000363599 104 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 Y_RNA.380-201ENST00000365663 111 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 Y_RNA.526-201ENST00000384572 110 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 MIR520A-201ENST00000384862 85 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 MIR548B-201ENST00000385247 97 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 U8.13-201ENST00000390842 128 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 MRPL35P1-201ENST00000404272 572 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 RNU6-101P-201ENST00000410323 104 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 SDAD1P3-201ENST00000427380 333 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 AC003989.2-201ENST00000440224 169 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 RPEP5-201ENST00000441137 268 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 MTCO1P44-201ENST00000441935 243 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 FCF1P4-201ENST00000448326 183 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 HMGN2P9-201ENST00000476875 229 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 CBX3P4-201ENST00000538909 354 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 MIR4285-201ENST00000581001 85 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 AC008873.1-201ENST00000625051 138 ntBASIC1.71□□□□□ -2.14
PDLIM5Q96HC4 RNU6-1305P-201ENST00000364353 104 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 RNU4-50P-201ENST00000364361 141 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 RNU6-926P-201ENST00000384075 107 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 SNORD78.2-201ENST00000391076 69 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 MTND2P23-201ENST00000422990 651 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 AC069257.2-201ENST00000441819 155 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 NDUFB4P10-201ENST00000452541 359 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 snoU13.9-201ENST00000458927 103 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 AC010531.2-201ENST00000465012 153 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 AC067942.3-201ENST00000512025 362 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 RNU6-408P-201ENST00000515910 100 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 RNU6-327P-201ENST00000516270 127 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 RNU1-117P-201ENST00000517041 158 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 AP002001.1-203ENST00000534002 267 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 AC018448.1-201ENST00000552843 316 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 AC008737.2-201ENST00000599446 118 ntBASIC1.7□□□□□ -2.14
PDLIM5Q96HC4 MIR410-201ENST00000362222 80 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 MIR424-201ENST00000362227 98 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 MIR126-201ENST00000362291 85 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 RNU6-626P-201ENST00000363354 107 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 Y_RNA.214-201ENST00000364201 112 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 SNORA63.7-201ENST00000365579 123 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 RNU6-418P-201ENST00000384035 107 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 RNU6-975P-201ENST00000384296 105 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 Y_RNA.471-201ENST00000384312 102 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 MIR583-201ENST00000384846 75 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 SNORA40.18-201ENST00000391200 128 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 MIR1267-201ENST00000408723 78 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 ELOCP20-201ENST00000422460 345 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 AC073910.1-201ENST00000445047 438 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 RNU6-948P-201ENST00000516374 107 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 Y_RNA.720-201ENST00000517166 92 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 AC055872.1-201ENST00000570978 278 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 AL390123.1-201ENST00000603216 237 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 RAC1P9-201ENST00000604990 392 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 AC022513.1-201ENST00000624512 117 ntBASIC1.69□□□□□ -2.14
PDLIM5Q96HC4 AC010615.1-201ENST00000594254 1764 ntBASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 U3.8-201ENST00000363675 217 ntBASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 RNU6-1019P-201ENST00000364424 107 ntBASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 Y_RNA.498-201ENST00000384460 102 ntBASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 MIR1185-2-201ENST00000408687 86 ntBASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 UQCRBP2-201ENST00000447827 297 ntBASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 AC016717.1-201ENST00000448918 286 ntBASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 RNU7-57P-201ENST00000459540 60 ntBASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 AC010655.3-201ENST00000478818 450 ntBASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 RNU6-1045P-201ENST00000516321 107 ntBASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 RNA5SP481-201ENST00000516814 122 ntBASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 RNU6-897P-201ENST00000517135 105 ntBASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 AC136443.5-201ENST00000603741 370 ntBASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 AL355297.3-201ENST00000604082 446 ntBASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.68□□□□□ -2.14
PDLIM5Q96HC4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 RNU6-862P-201ENST00000362804 105 ntBASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 RNU1-96P-201ENST00000364163 162 ntBASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 RNU6-454P-201ENST00000364292 107 ntBASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 RNU6-20P-201ENST00000384106 107 ntBASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 RNU6-360P-201ENST00000390944 104 ntBASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 RPL21P1-201ENST00000399532 476 ntBASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 MIR548F4-201ENST00000408515 105 ntBASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 AL358176.2-201ENST00000425769 204 ntBASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 MTND5P22-201ENST00000458380 195 ntBASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 RNU6-1046P-201ENST00000516538 107 ntBASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 RNU6-250P-201ENST00000516958 103 ntBASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 RNU6-856P-201ENST00000516959 98 ntBASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 AC131281.1-201ENST00000522984 164 ntBASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 AC136932.1-201ENST00000574771 208 ntBASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 AC084768.2-201ENST00000622736 221 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms