Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.11□□□□□ -1.91
BRF1Q92994 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.11□□□□□ -1.91
BRF1Q92994 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.11□□□□□ -1.91
BRF1Q92994 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.11□□□□□ -1.91
BRF1Q92994 AL391903.3-201ENST00000612158 163 ntBASIC3.11□□□□□ -1.91
BRF1Q92994 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.11□□□□□ -1.91
BRF1Q92994 AC006386.2-201ENST00000624491 75 ntBASIC3.11□□□□□ -1.91
BRF1Q92994 AC012005.1-201ENST00000624575 75 ntBASIC3.11□□□□□ -1.91
BRF1Q92994 MIR1248-201ENST00000629190 106 ntBASIC3.11□□□□□ -1.91
BRF1Q92994 AC080100.1-201ENST00000624239 5356 ntBASIC3.11□□□□□ -1.91
BRF1Q92994 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.11□□□□□ -1.91
BRF1Q92994 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
BRF1Q92994 AC092435.3-201ENST00000565538 3654 ntBASIC3.1□□□□□ -1.91
BRF1Q92994 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
BRF1Q92994 U8.7-201ENST00000364940 136 ntBASIC3.1□□□□□ -1.91
BRF1Q92994 RNU6-546P-201ENST00000383991 107 ntBASIC3.1□□□□□ -1.91
BRF1Q92994 RNU6-1323P-201ENST00000384025 107 ntBASIC3.1□□□□□ -1.91
BRF1Q92994 MIR9-1-201ENST00000385198 89 ntBASIC3.1□□□□□ -1.91
BRF1Q92994 RNA5SP210-201ENST00000391034 120 ntBASIC3.1□□□□□ -1.91
BRF1Q92994 FO393413.1-201ENST00000402892 195 ntBASIC3.1□□□□□ -1.91
BRF1Q92994 AC008134.1-201ENST00000420943 193 ntBASIC3.1□□□□□ -1.91
BRF1Q92994 CR769767.1-201ENST00000436337 346 ntBASIC3.1□□□□□ -1.91
BRF1Q92994 HMGN2P18-201ENST00000450680 270 ntBASIC3.1□□□□□ -1.91
BRF1Q92994 SCARNA8-201ENST00000515924 131 ntBASIC3.1□□□□□ -1.91
BRF1Q92994 SNORA48.11-201ENST00000517015 89 ntBASIC3.1□□□□□ -1.91
BRF1Q92994 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.1□□□□□ -1.91
BRF1Q92994 AC007536.1-201ENST00000533382 349 ntBASIC3.1□□□□□ -1.91
BRF1Q92994 EIF4BP1-201ENST00000554881 351 ntBASIC3.1□□□□□ -1.91
BRF1Q92994 AP003357.1-201ENST00000604497 148 ntBASIC3.1□□□□□ -1.91
BRF1Q92994 MIR548AY-201ENST00000617669 107 ntBASIC3.1□□□□□ -1.91
BRF1Q92994 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
BRF1Q92994 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
BRF1Q92994 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BRF1Q92994 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.09□□□□□ -1.91
BRF1Q92994 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
BRF1Q92994 RNU6-438P-201ENST00000365561 103 ntBASIC3.09□□□□□ -1.91
BRF1Q92994 RNU6-969P-201ENST00000383900 105 ntBASIC3.09□□□□□ -1.91
BRF1Q92994 Y_RNA.572-201ENST00000384757 98 ntBASIC3.09□□□□□ -1.91
BRF1Q92994 MIR483-201ENST00000385070 76 ntBASIC3.09□□□□□ -1.91
BRF1Q92994 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.09□□□□□ -1.91
BRF1Q92994 HSPE1P21-201ENST00000438283 308 ntBASIC3.09□□□□□ -1.91
BRF1Q92994 AC023141.11-201ENST00000508864 202 ntBASIC3.09□□□□□ -1.91
BRF1Q92994 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.09□□□□□ -1.91
BRF1Q92994 RN7SKP282-201ENST00000516824 299 ntBASIC3.09□□□□□ -1.91
BRF1Q92994 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.09□□□□□ -1.91
BRF1Q92994 GTF3AP2-201ENST00000557014 266 ntBASIC3.09□□□□□ -1.91
BRF1Q92994 MIR4724-201ENST00000579485 89 ntBASIC3.09□□□□□ -1.91
BRF1Q92994 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.09□□□□□ -1.91
BRF1Q92994 MIR3616-201ENST00000584070 92 ntBASIC3.09□□□□□ -1.91
BRF1Q92994 ELOCP29-201ENST00000588193 334 ntBASIC3.09□□□□□ -1.91
BRF1Q92994 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
BRF1Q92994 SNORD21-201ENST00000383953 95 ntBASIC3.08□□□□□ -1.92
BRF1Q92994 RNU6-418P-201ENST00000384035 107 ntBASIC3.08□□□□□ -1.92
BRF1Q92994 SNORD116-13-201ENST00000384408 92 ntBASIC3.08□□□□□ -1.92
BRF1Q92994 MIR518C-201ENST00000384822 101 ntBASIC3.08□□□□□ -1.92
BRF1Q92994 RNU2-32P-201ENST00000411193 191 ntBASIC3.08□□□□□ -1.92
BRF1Q92994 COTL1P1-201ENST00000422309 375 ntBASIC3.08□□□□□ -1.92
BRF1Q92994 AC010154.1-201ENST00000425857 269 ntBASIC3.08□□□□□ -1.92
BRF1Q92994 EEF1B2P7-201ENST00000451177 676 ntBASIC3.08□□□□□ -1.92
BRF1Q92994 AC117454.1-201ENST00000491120 168 ntBASIC3.08□□□□□ -1.92
BRF1Q92994 RNA5SP20-201ENST00000515976 84 ntBASIC3.08□□□□□ -1.92
BRF1Q92994 RNU6-965P-201ENST00000516721 96 ntBASIC3.08□□□□□ -1.92
BRF1Q92994 RNU7-116P-201ENST00000516940 62 ntBASIC3.08□□□□□ -1.92
BRF1Q92994 SNORA31.26-201ENST00000517250 137 ntBASIC3.08□□□□□ -1.92
BRF1Q92994 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.08□□□□□ -1.92
BRF1Q92994 AC109810.1-201ENST00000534066 224 ntBASIC3.08□□□□□ -1.92
BRF1Q92994 AC005972.2-201ENST00000604690 348 ntBASIC3.08□□□□□ -1.92
BRF1Q92994 AC068647.2-201ENST00000637380 353 ntBASIC3.08□□□□□ -1.92
BRF1Q92994 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.08□□□□□ -1.92
BRF1Q92994 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.07□□□□□ -1.92
BRF1Q92994 SNORA80A-201ENST00000363922 136 ntBASIC3.07□□□□□ -1.92
BRF1Q92994 RNU6-1240P-201ENST00000365155 104 ntBASIC3.07□□□□□ -1.92
BRF1Q92994 MIR592-201ENST00000384959 97 ntBASIC3.07□□□□□ -1.92
BRF1Q92994 SNORA36B-201ENST00000410438 131 ntBASIC3.07□□□□□ -1.92
BRF1Q92994 RNU2-52P-201ENST00000410680 190 ntBASIC3.07□□□□□ -1.92
BRF1Q92994 Z92545.1-201ENST00000411782 234 ntBASIC3.07□□□□□ -1.92
BRF1Q92994 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.07□□□□□ -1.92
BRF1Q92994 AC010531.2-201ENST00000465012 153 ntBASIC3.07□□□□□ -1.92
BRF1Q92994 RN7SL499P-201ENST00000481141 276 ntBASIC3.07□□□□□ -1.92
BRF1Q92994 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.07□□□□□ -1.92
BRF1Q92994 RNU6-453P-201ENST00000516819 85 ntBASIC3.07□□□□□ -1.92
BRF1Q92994 RNA5SP490-201ENST00000517141 136 ntBASIC3.07□□□□□ -1.92
BRF1Q92994 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.07□□□□□ -1.92
BRF1Q92994 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.07□□□□□ -1.92
BRF1Q92994 LARP7P3-201ENST00000579888 337 ntBASIC3.07□□□□□ -1.92
BRF1Q92994 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
BRF1Q92994 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
BRF1Q92994 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
BRF1Q92994 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
BRF1Q92994 MIR367-201ENST00000362299 68 ntBASIC3.06□□□□□ -1.92
BRF1Q92994 Y_RNA.229-201ENST00000364347 113 ntBASIC3.06□□□□□ -1.92
BRF1Q92994 RNU6-407P-201ENST00000365280 104 ntBASIC3.06□□□□□ -1.92
BRF1Q92994 Y_RNA.343-201ENST00000365354 112 ntBASIC3.06□□□□□ -1.92
BRF1Q92994 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
BRF1Q92994 RNU6-376P-201ENST00000384731 106 ntBASIC3.06□□□□□ -1.92
BRF1Q92994 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
BRF1Q92994 RNU6-1228P-201ENST00000391014 107 ntBASIC3.06□□□□□ -1.92
BRF1Q92994 RNU2-63P-201ENST00000410792 194 ntBASIC3.06□□□□□ -1.92
BRF1Q92994 AC016909.1-201ENST00000415916 166 ntBASIC3.06□□□□□ -1.92
BRF1Q92994 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms