Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
RAB40AQ8WXH6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 RNU6-770P-201ENST00000363929 105 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 SNORA8-201ENST00000384574 139 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 AL135786.1-201ENST00000415892 214 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 AC010154.1-201ENST00000425857 269 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 RPS15AP28-201ENST00000435088 386 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 AC069257.2-201ENST00000441819 155 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 RPL23AP7-203ENST00000449021 469 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 SEPT14P8-201ENST00000508026 178 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 RNU6-1143P-201ENST00000516125 104 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 SCARNA15.1-201ENST00000516384 125 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 RNU6-966P-201ENST00000516479 104 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 SUB1P4-201ENST00000566062 339 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 MIR3945-201ENST00000581853 98 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 MIR5007-201ENST00000583098 95 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 AL360085.1-201ENST00000604713 532 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 SNORD113-5-201ENST00000607261 78 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 AC046143.2-201ENST00000609789 160 ntBASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
RAB40AQ8WXH6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 Y_RNA.19-201ENST00000362462 99 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 SNORD114-7-201ENST00000362520 77 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 Y_RNA.124-201ENST00000363339 93 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 SNORD113-8-201ENST00000363497 74 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 Y_RNA.214-201ENST00000364201 112 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 Y_RNA.361-201ENST00000365515 120 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 RNU6-738P-201ENST00000384531 106 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 AL356379.1-201ENST00000414105 126 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 ELOCP20-201ENST00000422460 345 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 AC245047.4-201ENST00000433189 144 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 RPS26P55-201ENST00000471178 356 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 AC010409.1-201ENST00000487382 476 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 AC097462.1-201ENST00000514125 324 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 RNU1-40P-201ENST00000516816 164 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 RNU1-97P-201ENST00000516872 164 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 AC084364.2-201ENST00000546924 395 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 AC008737.2-201ENST00000599446 118 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 AC010615.1-201ENST00000594254 1764 ntBASIC1.95□□□□□ -2.1
RAB40AQ8WXH6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 SNORA70B-201ENST00000384210 135 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 SNORD115-46-201ENST00000390982 71 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 RNA5SP212-201ENST00000391223 107 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 RPL21P1-201ENST00000399532 476 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 Y_RNA.602-201ENST00000410535 92 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 RNA5SP100-201ENST00000410903 110 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 RNA5SP59-201ENST00000410922 110 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 EBAG9P1-201ENST00000418955 543 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 AL356320.1-201ENST00000429616 163 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 MTND5P22-201ENST00000458380 195 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 RNA5SP233-201ENST00000459153 113 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 HMGB3P17-201ENST00000504195 649 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 RNU6-436P-201ENST00000516171 114 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 RNU7-99P-201ENST00000516271 62 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 RNA5SP281-201ENST00000516504 135 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 MIR514B-201ENST00000516774 80 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 RNU7-172P-201ENST00000517125 64 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 AC005034.5-201ENST00000604219 466 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.94□□□□□ -2.1
RAB40AQ8WXH6 ZNF658B-202ENST00000615961 3375 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 Y_RNA.105-201ENST00000363182 111 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 RNU1-22P-201ENST00000363334 158 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 RNU6-112P-201ENST00000363599 104 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 Y_RNA.162-201ENST00000363683 102 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 RNU6-505P-201ENST00000384427 107 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 MIR520A-201ENST00000384862 85 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 SNORA48.3-201ENST00000391081 134 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 SNORA3.2-201ENST00000408221 125 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 RNA5SP425-201ENST00000410336 112 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 RNU6-121P-201ENST00000410525 99 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 Z98742.3-201ENST00000418637 326 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 AC244636.1-201ENST00000421152 228 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 AL731563.1-201ENST00000442202 214 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 RPL23AP6-201ENST00000446637 472 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 AC025033.1-201ENST00000463883 194 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 AC025465.3-201ENST00000510570 311 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 RNU6-1278P-201ENST00000516130 107 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 RNU6-327P-201ENST00000516270 127 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 MIR4299-201ENST00000577899 72 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 AL773524.1-201ENST00000614065 229 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 474.2 ms