Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC010655.3-201ENST00000478818 450 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 MRPS17P9-201ENST00000511924 393 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 AC011406.1-201ENST00000512440 370 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-1146P-201ENST00000516282 102 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 Y_RNA.720-201ENST00000517166 92 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 RNU2-12P-201ENST00000517216 168 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 AC055872.1-201ENST00000570978 278 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 AC004467.1-201ENST00000615678 330 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 AC022513.1-201ENST00000624512 117 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 Y_RNA.243-201ENST00000364481 109 ntBASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 Y_RNA.361-201ENST00000365515 120 ntBASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 RNU2-54P-201ENST00000410299 190 ntBASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 RNU2-20P-201ENST00000410425 191 ntBASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 RNA5SP450-201ENST00000411206 102 ntBASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 HMGN2P3-201ENST00000433603 273 ntBASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 HMGN2P5-201ENST00000436882 273 ntBASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-897P-201ENST00000517135 105 ntBASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 AC022441.3-201ENST00000605737 136 ntBASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 AC006001.4-201ENST00000622243 395 ntBASIC1.89□□□□□ -2.11
SLC44A1Q8WWI5 ZNF355P-201ENST00000427301 3216 ntBASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 SNORD114-7-201ENST00000362520 77 ntBASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 snoU2-30.2-201ENST00000362805 70 ntBASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 Y_RNA.101-201ENST00000363154 102 ntBASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 SNORA72.2-201ENST00000365028 127 ntBASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 MIR597-201ENST00000384968 97 ntBASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 RNU11-3P-201ENST00000391111 133 ntBASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 AL117342.1-201ENST00000404861 406 ntBASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 MTND5P22-201ENST00000458380 195 ntBASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 AC010598.1-201ENST00000510378 103 ntBASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 AC025465.3-201ENST00000510570 311 ntBASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 AC136932.1-201ENST00000574771 208 ntBASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 AL360085.1-201ENST00000604713 532 ntBASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 U6.115-201ENST00000636045 103 ntBASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 MIR338-201ENST00000636369 67 ntBASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.88□□□□□ -2.11
SLC44A1Q8WWI5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-1175P-201ENST00000365200 107 ntBASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 RPL21P1-201ENST00000399532 476 ntBASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 HMGN2P34-201ENST00000437647 269 ntBASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 HMGB3P17-201ENST00000504195 649 ntBASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 MRPS35P2-201ENST00000508242 191 ntBASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-1143P-201ENST00000516125 104 ntBASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-397P-201ENST00000516226 104 ntBASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 AP005660.1-201ENST00000522972 293 ntBASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 MIR4300-201ENST00000581016 96 ntBASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 MIR4524B-201ENST00000581569 115 ntBASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC44A1Q8WWI5 Y_RNA.143-201ENST00000363520 106 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 Y_RNA.162-201ENST00000363683 102 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 SNORD115-30-201ENST00000364117 82 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 Y_RNA.210-201ENST00000364161 110 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 Y_RNA.214-201ENST00000364201 112 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 Y_RNA.446-201ENST00000384178 104 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-937P-201ENST00000384325 106 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 MIR515-2-201ENST00000384883 83 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 MIR515-1-201ENST00000384884 83 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 MIR676-201ENST00000390702 67 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 SNORA48.1-201ENST00000390879 135 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 SNORD115-46-201ENST00000390982 71 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 AL512604.1-201ENST00000404812 257 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 MIR548F4-201ENST00000408515 105 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-1199P-201ENST00000411249 104 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 CST2P1-201ENST00000425770 87 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 SNORD65B-201ENST00000459126 73 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-237P-201ENST00000515985 71 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-1041P-201ENST00000516254 102 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 SNORA40.15-201ENST00000516884 107 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 AC006380.1-201ENST00000603598 186 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 PRR13P7-201ENST00000605538 430 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 MIR376A1-201ENST00000616574 68 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 AC008555.8-201ENST00000623602 2168 ntBASIC1.86□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-770P-201ENST00000363929 105 ntBASIC1.85□□□□□ -2.11
SLC44A1Q8WWI5 Y_RNA.287-201ENST00000364853 94 ntBASIC1.85□□□□□ -2.11
SLC44A1Q8WWI5 AL355796.1-201ENST00000406706 323 ntBASIC1.85□□□□□ -2.11
SLC44A1Q8WWI5 MIR1253-201ENST00000408273 105 ntBASIC1.85□□□□□ -2.11
SLC44A1Q8WWI5 RPL23AP36-201ENST00000413895 458 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms