Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC022432.1-201ENST00000595739 310 ntBASIC0.98□□□□□ -2.25
SHROOM3Q8TF72 SNORD11B-201ENST00000607707 90 ntBASIC0.98□□□□□ -2.25
SHROOM3Q8TF72 MTND4P12-201ENST00000498999 1377 ntBASIC0.98□□□□□ -2.25
SHROOM3Q8TF72 RNU6-222P-201ENST00000362438 107 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 RNU6-1283P-201ENST00000365314 105 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 RNU6-596P-201ENST00000365395 98 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.529-201ENST00000384586 119 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 RNU6-417P-201ENST00000384712 107 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 MIR548K-201ENST00000408406 116 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 RN7SKP200-201ENST00000410564 320 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.646-201ENST00000410980 101 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 RNU7-152P-201ENST00000458982 64 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 AC093852.1-201ENST00000503587 266 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 RNU6-307P-201ENST00000516743 106 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 SUMO2P18-201ENST00000518873 252 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 RRN3P3-201ENST00000549207 578 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 AL121579.1-201ENST00000555129 305 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 MIR4713-201ENST00000582691 75 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 AC100812.1-201ENST00000607622 580 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 RNU6-700P-201ENST00000391043 107 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 EIF1P2-201ENST00000428233 350 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 RNU7-87P-201ENST00000459343 62 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 AC007215.1-201ENST00000464893 276 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 RNU1-117P-201ENST00000517041 158 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 AK6P2-201ENST00000549020 471 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 MIR548S-201ENST00000581352 82 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 AC009229.3-201ENST00000608056 282 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 AL359697.1-201ENST00000624879 587 ntBASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.97□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.99-201ENST00000363138 105 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.258-201ENST00000364613 105 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 RNU6-975P-201ENST00000384296 105 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.577-201ENST00000384794 101 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 RNU6-1186P-201ENST00000410429 97 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 RNA5SP501-201ENST00000410990 112 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 AC093303.1-201ENST00000514549 295 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 RNU6-470P-201ENST00000515954 104 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 AL353149.1-201ENST00000610667 244 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.48-201ENST00000362710 103 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 RNU6-137P-201ENST00000363680 108 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.274-201ENST00000364714 101 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.314-201ENST00000365114 102 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 MIR1267-201ENST00000408723 78 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 AC009310.1-201ENST00000414414 451 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 AL158823.1-201ENST00000418441 478 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 AC123900.1-201ENST00000420390 96 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 MTCO1P44-201ENST00000441935 243 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 PCNPP5-201ENST00000452246 481 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 RNU7-57P-201ENST00000459540 60 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 AC097462.1-201ENST00000514125 324 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 RNU6-120P-201ENST00000516077 103 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.683-201ENST00000516508 93 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 RNA5SP395-201ENST00000516567 118 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 RNA5SP437-201ENST00000517249 129 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 AC005786.1-201ENST00000588553 154 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 AL117336.2-201ENST00000602435 335 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.96□□□□□ -2.26
SHROOM3Q8TF72 MTND5P16-201ENST00000460269 1703 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 MIR340-201ENST00000362125 95 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 RNU1-76P-201ENST00000362903 159 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 RNU6-1164P-201ENST00000364428 107 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 RNU6-890P-201ENST00000384121 107 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 RNU6-281P-201ENST00000384212 103 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 SNORA8-201ENST00000384574 139 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 MIR300-201ENST00000401138 83 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 MIR1253-201ENST00000408273 105 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 AC098934.3-201ENST00000430450 190 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 AC015922.2-201ENST00000435593 184 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 JTBP1-201ENST00000441314 247 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 AC004386.2-201ENST00000441858 148 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 MIR2053-201ENST00000459295 91 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 RPS27P22-201ENST00000478056 241 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 SNORA20.3-201ENST00000516880 132 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 AC134698.4-201ENST00000523451 826 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 AC026470.2-201ENST00000561492 181 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 AC005562.2-201ENST00000618264 111 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms