Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU6-326P-201ENST00000365480 107 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 RNU1-57P-201ENST00000384491 166 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 Y_RNA.569-201ENST00000384749 103 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 MIR218-1-201ENST00000384999 110 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 MIR10B-201ENST00000385011 110 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 MIR147B-201ENST00000390185 80 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.1□□□□□ -2.07
SNED1Q8TER0 AC016632.1-201ENST00000503994 196 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.1□□□□□ -2.07
SNED1Q8TER0 RNA5SP82-201ENST00000516707 92 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 RNU6-58P-201ENST00000517143 103 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 SNORA31.23-201ENST00000517219 133 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 IGLV3-17-201ENST00000519099 244 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 AC024405.2-202ENST00000532731 184 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 AC016256.1-201ENST00000547971 354 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 AC027288.2-201ENST00000553028 243 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.1□□□□□ -2.07
SNED1Q8TER0 SNORA43.4-201ENST00000629559 138 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SNED1Q8TER0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SNED1Q8TER0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SNED1Q8TER0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SNED1Q8TER0 RNU6-1141P-201ENST00000364520 107 ntBASIC2.09□□□□□ -2.07
SNED1Q8TER0 RNU6-740P-201ENST00000364734 105 ntBASIC2.09□□□□□ -2.07
SNED1Q8TER0 RNU6-20P-201ENST00000384106 107 ntBASIC2.09□□□□□ -2.07
SNED1Q8TER0 RNU6-1145P-201ENST00000384246 107 ntBASIC2.09□□□□□ -2.07
SNED1Q8TER0 MIR487A-201ENST00000385009 80 ntBASIC2.09□□□□□ -2.07
SNED1Q8TER0 RNU6-159P-201ENST00000391080 106 ntBASIC2.09□□□□□ -2.07
SNED1Q8TER0 EIF4EP4-201ENST00000424916 578 ntBASIC2.09□□□□□ -2.07
SNED1Q8TER0 AC078809.1-201ENST00000427601 140 ntBASIC2.09□□□□□ -2.07
SNED1Q8TER0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.09□□□□□ -2.07
SNED1Q8TER0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.09□□□□□ -2.07
SNED1Q8TER0 HMGB3P3-201ENST00000510526 400 ntBASIC2.09□□□□□ -2.07
SNED1Q8TER0 AC006199.1-201ENST00000548728 219 ntBASIC2.09□□□□□ -2.07
SNED1Q8TER0 AK6P2-201ENST00000549020 471 ntBASIC2.09□□□□□ -2.07
SNED1Q8TER0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.09□□□□□ -2.07
SNED1Q8TER0 SNORA4-201ENST00000584302 138 ntBASIC2.09□□□□□ -2.07
SNED1Q8TER0 AC008749.1-201ENST00000597650 306 ntBASIC2.09□□□□□ -2.07
SNED1Q8TER0 AC091152.3-201ENST00000604227 325 ntBASIC2.09□□□□□ -2.07
SNED1Q8TER0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SNED1Q8TER0 MIR411-201ENST00000362239 96 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 RNU6-545P-201ENST00000362681 104 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 SNORA36A-201ENST00000384221 132 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 RNU6-378P-201ENST00000384324 107 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 MIR329-1-201ENST00000385028 80 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SNED1Q8TER0 Y_RNA.626-201ENST00000411288 95 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 CYCSP48-201ENST00000417124 323 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 PTGES3P4-201ENST00000426243 356 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.08□□□□□ -2.08
SNED1Q8TER0 AC244670.1-201ENST00000436879 112 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.08□□□□□ -2.08
SNED1Q8TER0 RPL30P12-201ENST00000474666 353 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 RNU6-406P-201ENST00000516470 107 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 SNORA25.14-201ENST00000516481 132 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.08□□□□□ -2.08
SNED1Q8TER0 AC087441.2-201ENST00000529141 262 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.08□□□□□ -2.08
SNED1Q8TER0 AP002392.1-201ENST00000537692 208 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 AC006001.4-201ENST00000622243 395 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 AC127459.3-201ENST00000624328 466 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 U2.22-201ENST00000636441 106 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SNED1Q8TER0 RNU6-961P-201ENST00000363893 105 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 SNORA16.1-201ENST00000364597 132 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 Y_RNA.292-201ENST00000364904 97 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 RNU6-1175P-201ENST00000365200 107 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 RNU6-1001P-201ENST00000411265 100 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.08□□□□□ -2.08
SNED1Q8TER0 AL392103.1-201ENST00000447000 198 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 RPL39P29-201ENST00000447779 157 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 Y_RNA.679-201ENST00000516416 91 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 RNA5SP54-201ENST00000516951 92 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 AC021231.3-201ENST00000558497 370 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 AC105245.1-201ENST00000581934 244 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 AL162424.1-201ENST00000602325 221 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 MIR3529-201ENST00000637713 78 ntBASIC2.08□□□□□ -2.08
SNED1Q8TER0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SNED1Q8TER0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
SNED1Q8TER0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SNED1Q8TER0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
SNED1Q8TER0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SNED1Q8TER0 AC092268.1-201ENST00000342691 405 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 SNORA25.1-201ENST00000362326 128 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 RNY4P28-201ENST00000365281 93 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 SNORA6-201ENST00000384033 151 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 RNU6-746P-201ENST00000384112 109 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 Y_RNA.464-201ENST00000384282 110 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 Y_RNA.590-201ENST00000410140 107 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 RNA5SP390-201ENST00000410191 113 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 RN7SKP61-201ENST00000410642 295 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 RNU6-651P-201ENST00000411040 105 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 AC004965.1-201ENST00000413033 213 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 AL390729.2-201ENST00000416137 156 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 COX6CP10-201ENST00000416832 224 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 AC012306.1-201ENST00000423267 114 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.07□□□□□ -2.08
SNED1Q8TER0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.07□□□□□ -2.08
SNED1Q8TER0 snoU13.6-201ENST00000458785 104 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 RNU7-120P-201ENST00000459334 63 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms