Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 Y_RNA.4-201ENST00000362333 112 ntBASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 RNU6-661P-201ENST00000362409 107 ntBASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 SNORD115-28-201ENST00000363931 81 ntBASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 Y_RNA.351-201ENST00000365436 96 ntBASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 Y_RNA.440-201ENST00000384120 114 ntBASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 RNY1P4-201ENST00000384595 115 ntBASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 RNU6-887P-201ENST00000410660 100 ntBASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 RPS29P4-201ENST00000414733 161 ntBASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 AC025750.2-201ENST00000442609 450 ntBASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 RPL29P14-201ENST00000495837 428 ntBASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 RNU2-34P-201ENST00000516534 121 ntBASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 RNU7-25P-201ENST00000516544 62 ntBASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNIP1Q8TAD8 AP001486.2-201ENST00000561652 5113 ntBASIC3.8□□□□□ -1.8
SNIP1Q8TAD8 Y_RNA.95-201ENST00000363079 95 ntBASIC3.8□□□□□ -1.8
SNIP1Q8TAD8 SNORD115-19-201ENST00000363098 82 ntBASIC3.8□□□□□ -1.8
SNIP1Q8TAD8 SNORD115-18-201ENST00000363293 82 ntBASIC3.8□□□□□ -1.8
SNIP1Q8TAD8 SNORD115-17-201ENST00000364612 82 ntBASIC3.8□□□□□ -1.8
SNIP1Q8TAD8 RNU4-16P-201ENST00000364737 141 ntBASIC3.8□□□□□ -1.8
SNIP1Q8TAD8 Z98742.2-201ENST00000431564 187 ntBASIC3.8□□□□□ -1.8
SNIP1Q8TAD8 AC099677.2-201ENST00000436385 175 ntBASIC3.8□□□□□ -1.8
SNIP1Q8TAD8 AP002884.2-201ENST00000471647 395 ntBASIC3.8□□□□□ -1.8
SNIP1Q8TAD8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.8□□□□□ -1.8
SNIP1Q8TAD8 MIR7975-201ENST00000619350 68 ntBASIC3.8□□□□□ -1.8
SNIP1Q8TAD8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNIP1Q8TAD8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 RNU6-198P-201ENST00000384258 104 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 Y_RNA.467-201ENST00000384297 102 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 RNU6-1274P-201ENST00000384557 107 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 MIR802-201ENST00000390235 94 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 MIR1253-201ENST00000408273 105 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 SNORA3.3-201ENST00000408712 125 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 RNU6-1186P-201ENST00000410429 97 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 HLA-N-201ENST00000437516 135 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 AL353813.1-201ENST00000440700 253 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 ABCF2P2-201ENST00000450549 296 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 PPIAP15-201ENST00000479662 484 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 RNU2-58P-201ENST00000516403 183 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 Y_RNA.714-201ENST00000517065 90 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 AC025627.2-201ENST00000576220 160 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 MIR4778-201ENST00000577635 80 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 AC064859.1-201ENST00000624741 174 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 AL672167.1-203ENST00000641299 2975 ntBASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNIP1Q8TAD8 UBE3AP2-201ENST00000429033 2259 ntBASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 Y_RNA.191-201ENST00000363972 113 ntBASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 RNU6-743P-201ENST00000364151 106 ntBASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 RNA5SP97-201ENST00000365006 84 ntBASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 SNORD66.1-201ENST00000391230 76 ntBASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 FTH1P12-201ENST00000432137 551 ntBASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 RNU7-80P-201ENST00000459562 61 ntBASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 RN7SL293P-201ENST00000481765 281 ntBASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 RPS23P4-201ENST00000487908 423 ntBASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 AC005000.2-201ENST00000605468 310 ntBASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 AC006441.5-201ENST00000612680 209 ntBASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 AC091932.4-201ENST00000623386 200 ntBASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 MIR548BB-201ENST00000626714 66 ntBASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.78□□□□□ -1.8
SNIP1Q8TAD8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 MFSD8-236ENST00000641509 4050 ntBASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 RNU1-96P-201ENST00000364163 162 ntBASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 Y_RNA.547-201ENST00000384654 119 ntBASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 MIR218-2-201ENST00000385006 110 ntBASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 MIR522-201ENST00000385071 87 ntBASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 MIR513A2-201ENST00000385249 127 ntBASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 SNORA7.5-201ENST00000410672 110 ntBASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 AL445646.1-201ENST00000431784 216 ntBASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 Y_RNA.659-201ENST00000515994 113 ntBASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 SNORA18.7-201ENST00000516910 131 ntBASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 AC002984.1-201ENST00000591692 448 ntBASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 AC095038.3-201ENST00000634439 195 ntBASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
SNIP1Q8TAD8 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.76□□□□□ -1.81
SNIP1Q8TAD8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms