Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 MIR4448-201ENST00000584360 86 ntBASIC1.39□□□□□ -2.19
LINC01006Q8NI28 MIR4781-201ENST00000585250 76 ntBASIC1.39□□□□□ -2.19
LINC01006Q8NI28 SDR42E1P4-201ENST00000620894 481 ntBASIC1.39□□□□□ -2.19
LINC01006Q8NI28 AC091932.3-201ENST00000624223 323 ntBASIC1.39□□□□□ -2.19
LINC01006Q8NI28 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.39□□□□□ -2.19
LINC01006Q8NI28 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
LINC01006Q8NI28 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
LINC01006Q8NI28 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
LINC01006Q8NI28 ZNF702P-202ENST00000434269 1966 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 RNU6-661P-201ENST00000362409 107 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.101-201ENST00000363154 102 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 RNU4-50P-201ENST00000364361 141 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 SNORA16.1-201ENST00000364597 132 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 RNU6-20P-201ENST00000384106 107 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.455-201ENST00000384230 98 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
LINC01006Q8NI28 MRPL35P1-201ENST00000404272 572 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 AC005002.2-201ENST00000438228 269 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 RPL23AP3-201ENST00000453844 468 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 RNA5SP233-201ENST00000459153 113 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 AC093852.1-201ENST00000503587 266 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 AC011406.1-201ENST00000512440 370 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 RNVU1-2-201ENST00000516326 135 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 RNU6-1046P-201ENST00000516538 107 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 RNA5SP364-201ENST00000516938 78 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 CYCSP23-201ENST00000519781 313 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 AC027419.1-201ENST00000522976 328 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.38□□□□□ -2.19
LINC01006Q8NI28 MIR4287-201ENST00000579398 78 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 AC113195.1-201ENST00000579952 141 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 AL121655.1-201ENST00000605811 308 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.812-201ENST00000610788 101 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.784-201ENST00000613803 101 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.787-201ENST00000616522 101 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.780-201ENST00000617336 101 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 AC007742.2-201ENST00000618226 398 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.801-201ENST00000619005 101 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 MIR3674-201ENST00000636576 68 ntBASIC1.38□□□□□ -2.19
LINC01006Q8NI28 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
LINC01006Q8NI28 RNA5SP276-201ENST00000362580 94 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 RNU6-626P-201ENST00000363354 107 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.153-201ENST00000363615 91 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 RNU6-639P-201ENST00000384074 107 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 AL117342.1-201ENST00000404861 406 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 U3.40-201ENST00000408706 208 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 RNU4-62P-201ENST00000410125 130 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 RNU6-101P-201ENST00000410323 104 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 RNA5SP501-201ENST00000410990 112 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 AL158823.1-201ENST00000418441 478 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 AC099677.2-201ENST00000436385 175 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 HMGN2P34-201ENST00000437647 269 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 AL353689.1-201ENST00000438895 199 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 ATP5J2P3-201ENST00000451550 258 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 U8.20-201ENST00000459445 131 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.673-201ENST00000516306 88 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 AC022616.4-201ENST00000522985 181 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 MIR4719-201ENST00000585233 84 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 AC005034.5-201ENST00000604219 466 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 AL353621.2-201ENST00000605340 133 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.37□□□□□ -2.19
LINC01006Q8NI28 AC004467.1-201ENST00000615678 330 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 AC010205.1-201ENST00000616668 449 ntBASIC1.37□□□□□ -2.19
LINC01006Q8NI28 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC01006Q8NI28 MIR410-201ENST00000362222 80 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 RNU6-862P-201ENST00000362804 105 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.105-201ENST00000363182 111 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.143-201ENST00000363520 106 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.287-201ENST00000364853 94 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.36□□□□□ -2.19
LINC01006Q8NI28 AC117470.1-201ENST00000381974 330 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 RNU6-937P-201ENST00000384325 106 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.526-201ENST00000384572 110 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
LINC01006Q8NI28 AL355796.1-201ENST00000406706 323 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 MIR1252-201ENST00000408861 65 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 AP1B1P2-201ENST00000416196 106 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01006Q8NI28 AC010655.3-201ENST00000478818 450 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 AC131281.1-201ENST00000522984 164 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01006Q8NI28 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01006Q8NI28 AC136932.1-201ENST00000574771 208 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 MIR4303-201ENST00000581299 66 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 AC005176.2-201ENST00000596933 147 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 U1.36-201ENST00000620684 176 ntBASIC1.36□□□□□ -2.19
LINC01006Q8NI28 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
LINC01006Q8NI28 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.26-201ENST00000362539 101 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 snoU2-30.2-201ENST00000362805 70 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.124-201ENST00000363339 93 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.210-201ENST00000364161 110 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 SNORA63C-201ENST00000364578 129 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.439-201ENST00000384119 94 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.551-201ENST00000384661 102 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 RNU6-417P-201ENST00000384712 107 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 Y_RNA.570-201ENST00000384750 101 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 MIR606-201ENST00000384851 96 ntBASIC1.35□□□□□ -2.19
LINC01006Q8NI28 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
LINC01006Q8NI28 AL590004.1-201ENST00000405321 300 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms