Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 SNORA9.2-201ENST00000365361 133 ntBASIC2.72□□□□□ -1.97
HIPK4Q8NE63 RNU6-1323P-201ENST00000384025 107 ntBASIC2.72□□□□□ -1.97
HIPK4Q8NE63 AC060773.1-201ENST00000421698 310 ntBASIC2.72□□□□□ -1.97
HIPK4Q8NE63 RPS27P22-201ENST00000478056 241 ntBASIC2.72□□□□□ -1.97
HIPK4Q8NE63 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.72□□□□□ -1.97
HIPK4Q8NE63 SCARNA8-201ENST00000515924 131 ntBASIC2.72□□□□□ -1.97
HIPK4Q8NE63 MIR5004-201ENST00000579078 107 ntBASIC2.72□□□□□ -1.97
HIPK4Q8NE63 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.72□□□□□ -1.97
HIPK4Q8NE63 U2.20-201ENST00000613956 192 ntBASIC2.72□□□□□ -1.97
HIPK4Q8NE63 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.72□□□□□ -1.97
HIPK4Q8NE63 CENPCP1-201ENST00000533085 2578 ntBASIC2.72□□□□□ -1.97
HIPK4Q8NE63 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
HIPK4Q8NE63 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
HIPK4Q8NE63 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.71□□□□□ -1.98
HIPK4Q8NE63 Y_RNA.23-201ENST00000362496 106 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 RNU1-22P-201ENST00000363334 158 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 SNORA71.1-201ENST00000364523 117 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 RNU6-312P-201ENST00000364629 107 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 RNU6-275P-201ENST00000364910 107 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 RNU6-969P-201ENST00000383900 105 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 RNU6-144P-201ENST00000383951 107 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 SNORA36B-201ENST00000410438 131 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 RNA5SP511-201ENST00000410487 115 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 AL135786.1-201ENST00000415892 214 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.71□□□□□ -1.98
HIPK4Q8NE63 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.71□□□□□ -1.98
HIPK4Q8NE63 BX510359.1-201ENST00000456973 237 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 AC003982.1-202ENST00000469928 248 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 SNORA4.4-201ENST00000515921 135 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 SNORA9.3-201ENST00000516383 129 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 SCARNA13-201ENST00000516672 275 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 RNU6-453P-201ENST00000516819 85 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.71□□□□□ -1.98
HIPK4Q8NE63 AC015720.1-201ENST00000565251 277 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 AC127455.1-201ENST00000565496 145 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 AC005972.2-201ENST00000604690 348 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 AC108706.1-201ENST00000611053 297 ntBASIC2.71□□□□□ -1.98
HIPK4Q8NE63 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
HIPK4Q8NE63 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
HIPK4Q8NE63 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
HIPK4Q8NE63 Y_RNA.398-201ENST00000383952 99 ntBASIC2.7□□□□□ -1.98
HIPK4Q8NE63 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.7□□□□□ -1.98
HIPK4Q8NE63 AC097462.1-201ENST00000514125 324 ntBASIC2.7□□□□□ -1.98
HIPK4Q8NE63 RNU7-200P-201ENST00000516105 62 ntBASIC2.7□□□□□ -1.98
HIPK4Q8NE63 RNU6-406P-201ENST00000516470 107 ntBASIC2.7□□□□□ -1.98
HIPK4Q8NE63 NDUFA5P6-201ENST00000542110 379 ntBASIC2.7□□□□□ -1.98
HIPK4Q8NE63 AC004486.1-201ENST00000546846 233 ntBASIC2.7□□□□□ -1.98
HIPK4Q8NE63 MIR5688-201ENST00000580619 83 ntBASIC2.7□□□□□ -1.98
HIPK4Q8NE63 MIR4744-201ENST00000581563 82 ntBASIC2.7□□□□□ -1.98
HIPK4Q8NE63 AC007179.3-201ENST00000604976 235 ntBASIC2.7□□□□□ -1.98
HIPK4Q8NE63 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.7□□□□□ -1.98
HIPK4Q8NE63 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.7□□□□□ -1.98
HIPK4Q8NE63 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.7□□□□□ -1.98
HIPK4Q8NE63 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HIPK4Q8NE63 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HIPK4Q8NE63 Y_RNA.8-201ENST00000362353 102 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 RNU6-103P-201ENST00000363686 107 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 Y_RNA.272-201ENST00000364696 102 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.69□□□□□ -1.98
HIPK4Q8NE63 RNY1P5-201ENST00000383890 115 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 RNU6-383P-201ENST00000410864 94 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 SRIP3-201ENST00000413200 219 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 AL162725.1-201ENST00000435405 301 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 SEPT7P4-201ENST00000437076 306 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.69□□□□□ -1.98
HIPK4Q8NE63 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.69□□□□□ -1.98
HIPK4Q8NE63 RN7SL504P-201ENST00000494496 287 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 AC008885.1-201ENST00000514930 301 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 Y_RNA.797-201ENST00000515977 94 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.69□□□□□ -1.98
HIPK4Q8NE63 MIR4724-201ENST00000579485 89 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 MIR4438-201ENST00000585271 93 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 POLR3GP1-201ENST00000594073 261 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 RPL12P50-201ENST00000603116 116 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 U4atac.1-201ENST00000618345 95 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 AL355596.1-201ENST00000565399 3996 ntBASIC2.69□□□□□ -1.98
HIPK4Q8NE63 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HIPK4Q8NE63 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HIPK4Q8NE63 Y_RNA.229-201ENST00000364347 113 ntBASIC2.68□□□□□ -1.98
HIPK4Q8NE63 MIR616-201ENST00000385293 97 ntBASIC2.68□□□□□ -1.98
HIPK4Q8NE63 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HIPK4Q8NE63 RNU6-578P-201ENST00000390980 103 ntBASIC2.68□□□□□ -1.98
HIPK4Q8NE63 AC104389.3-201ENST00000445629 235 ntBASIC2.68□□□□□ -1.98
HIPK4Q8NE63 AC245047.8-201ENST00000456455 284 ntBASIC2.68□□□□□ -1.98
HIPK4Q8NE63 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.68□□□□□ -1.98
HIPK4Q8NE63 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.68□□□□□ -1.98
HIPK4Q8NE63 RNU7-116P-201ENST00000516940 62 ntBASIC2.68□□□□□ -1.98
HIPK4Q8NE63 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.68□□□□□ -1.98
HIPK4Q8NE63 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.68□□□□□ -1.98
HIPK4Q8NE63 AC073346.2-201ENST00000624724 2058 ntBASIC2.68□□□□□ -1.98
HIPK4Q8NE63 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
HIPK4Q8NE63 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
HIPK4Q8NE63 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.67□□□□□ -1.98
HIPK4Q8NE63 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HIPK4Q8NE63 MIR367-201ENST00000362299 68 ntBASIC2.67□□□□□ -1.98
HIPK4Q8NE63 RNU4-84P-201ENST00000364200 139 ntBASIC2.67□□□□□ -1.98
HIPK4Q8NE63 RNU6-1130P-201ENST00000365434 107 ntBASIC2.67□□□□□ -1.98
HIPK4Q8NE63 MIR1262-201ENST00000408276 93 ntBASIC2.67□□□□□ -1.98
HIPK4Q8NE63 AC010154.1-201ENST00000425857 269 ntBASIC2.67□□□□□ -1.98
HIPK4Q8NE63 SUMO1P4-201ENST00000429430 302 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms