Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 SNORA63D-201ENST00000364359 132 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 RNU5E-4P-201ENST00000364931 120 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 RNU6-867P-201ENST00000364956 107 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 SNORA72.2-201ENST00000365028 127 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 MIR515-2-201ENST00000384883 83 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 MIR515-1-201ENST00000384884 83 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 RNU6-360P-201ENST00000390944 104 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 RNU6-482P-201ENST00000391068 107 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 RAB28P5-201ENST00000427490 651 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 AC005002.2-201ENST00000438228 269 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 AC092473.1-201ENST00000441098 221 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 JTBP1-201ENST00000441314 247 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 RPS27P22-201ENST00000478056 241 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 AC010469.2-201ENST00000496412 480 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 AC023157.2-201ENST00000540596 141 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 AL359075.3-201ENST00000613288 217 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 U2.1-201ENST00000618978 145 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 AC104985.2-201ENST00000620598 500 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 ICE2P2-201ENST00000483823 2787 ntBASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
CCDC71LQ8N9Z2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 Y_RNA.419-201ENST00000384041 102 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 RNU6-708P-201ENST00000384217 107 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 RNU1-78P-201ENST00000391248 165 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 SNORA26.9-201ENST00000391322 122 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 AC022028.1-201ENST00000412054 408 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 AC069257.2-201ENST00000441819 155 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 AC007677.1-201ENST00000445757 515 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 CHEK2P4-201ENST00000450340 246 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 AC019176.1-201ENST00000518519 225 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 AP002001.1-203ENST00000534002 267 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 AL442163.3-201ENST00000554110 156 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 AC006600.1-201ENST00000572529 153 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 AC022432.1-201ENST00000595739 310 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 AL117336.2-201ENST00000602435 335 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 MIR8081-201ENST00000611533 95 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 MIR7974-201ENST00000615835 79 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 AC138305.3-201ENST00000624988 240 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 MIR3674-201ENST00000636576 68 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CCDC71LQ8N9Z2 RNA5SP432-201ENST00000362480 116 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 RNU6-1115P-201ENST00000362490 106 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 RNU6-961P-201ENST00000363893 105 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 RNU6-454P-201ENST00000364292 107 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 Y_RNA.315-201ENST00000365117 102 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 RNU6-407P-201ENST00000365280 104 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 SNORA20B-201ENST00000384220 132 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 RNY3P4-201ENST00000384428 101 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 Y_RNA.496-201ENST00000384444 101 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 AL355796.1-201ENST00000406706 323 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 COX6CP10-201ENST00000416832 224 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 AC010154.1-201ENST00000425857 269 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 AL606517.2-201ENST00000442855 241 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 FCF1P4-201ENST00000448326 183 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 snoU13.27-201ENST00000459278 104 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 RNU7-34P-201ENST00000459394 64 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 AC010598.1-201ENST00000510378 103 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 SNORA25.15-201ENST00000516487 89 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 RNU6-548P-201ENST00000517083 115 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 AC024995.1-201ENST00000523014 93 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 SNORD53B-201ENST00000577887 78 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 MIR4438-201ENST00000585271 93 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 AC092447.9-201ENST00000603395 144 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 U6.73-201ENST00000619194 103 ntBASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC71LQ8N9Z2 SNORD26-201ENST00000384147 75 ntBASIC1.2□□□□□ -2.22
CCDC71LQ8N9Z2 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
CCDC71LQ8N9Z2 RPL21P1-201ENST00000399532 476 ntBASIC1.2□□□□□ -2.22
CCDC71LQ8N9Z2 AL591806.2-201ENST00000433122 173 ntBASIC1.2□□□□□ -2.22
CCDC71LQ8N9Z2 AC099513.1-201ENST00000490423 301 ntBASIC1.2□□□□□ -2.22
CCDC71LQ8N9Z2 RNA5SP481-201ENST00000516814 122 ntBASIC1.2□□□□□ -2.22
CCDC71LQ8N9Z2 AC015712.3-201ENST00000559380 164 ntBASIC1.2□□□□□ -2.22
CCDC71LQ8N9Z2 MIR4709-201ENST00000577272 72 ntBASIC1.2□□□□□ -2.22
CCDC71LQ8N9Z2 MIR4769-201ENST00000584126 77 ntBASIC1.2□□□□□ -2.22
CCDC71LQ8N9Z2 VN1R91P-201ENST00000594377 169 ntBASIC1.2□□□□□ -2.22
CCDC71LQ8N9Z2 AL133255.1-201ENST00000606374 441 ntBASIC1.2□□□□□ -2.22
CCDC71LQ8N9Z2 AC011476.5-201ENST00000615594 130 ntBASIC1.2□□□□□ -2.22
CCDC71LQ8N9Z2 U6.108-201ENST00000637764 58 ntBASIC1.2□□□□□ -2.22
CCDC71LQ8N9Z2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC71LQ8N9Z2 MIR369-201ENST00000362155 70 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 Y_RNA.5-201ENST00000362334 102 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 SNORD1A-201ENST00000364968 72 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms