Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 MIR3074-201ENST00000384885 81 ntBASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 RNU2-49P-201ENST00000410666 184 ntBASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 MIR7851-201ENST00000610611 160 ntBASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 MIR486-1-201ENST00000612171 68 ntBASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 AL139811.1-201ENST00000424779 2299 ntBASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.77□□□□□ -1.81
NPAS3Q8IXF0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 RNU6-633P-201ENST00000362612 103 ntBASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 SNORD116-10-201ENST00000363791 102 ntBASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 Y_RNA.340-201ENST00000365330 92 ntBASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 RNU6-1189P-201ENST00000383958 107 ntBASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 RNA5SP120-201ENST00000410900 112 ntBASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 DBIP2-201ENST00000419076 262 ntBASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 AC005326.1-201ENST00000429197 123 ntBASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 RPL30P4-201ENST00000429309 333 ntBASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 AL353813.1-201ENST00000440700 253 ntBASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 AC115115.1-201ENST00000449927 248 ntBASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 snoU13.14-201ENST00000459372 104 ntBASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 AC125388.1-201ENST00000459631 156 ntBASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 U7.4-201ENST00000614961 63 ntBASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NPAS3Q8IXF0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
NPAS3Q8IXF0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
NPAS3Q8IXF0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.75□□□□□ -1.81
NPAS3Q8IXF0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NPAS3Q8IXF0 RNU6-655P-201ENST00000362858 107 ntBASIC3.75□□□□□ -1.81
NPAS3Q8IXF0 RNU1-22P-201ENST00000363334 158 ntBASIC3.75□□□□□ -1.81
NPAS3Q8IXF0 SNORD58A-201ENST00000383875 65 ntBASIC3.75□□□□□ -1.81
NPAS3Q8IXF0 RNU1-89P-201ENST00000384592 164 ntBASIC3.75□□□□□ -1.81
NPAS3Q8IXF0 RNU6-679P-201ENST00000391003 106 ntBASIC3.75□□□□□ -1.81
NPAS3Q8IXF0 AC025518.1-201ENST00000479856 347 ntBASIC3.75□□□□□ -1.81
NPAS3Q8IXF0 RPS29P21-201ENST00000496272 170 ntBASIC3.75□□□□□ -1.81
NPAS3Q8IXF0 RNU2-27P-201ENST00000516185 142 ntBASIC3.75□□□□□ -1.81
NPAS3Q8IXF0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.75□□□□□ -1.81
NPAS3Q8IXF0 ICE2P2-201ENST00000483823 2787 ntBASIC3.75□□□□□ -1.81
NPAS3Q8IXF0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
NPAS3Q8IXF0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.75□□□□□ -1.81
NPAS3Q8IXF0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 RNU4-35P-201ENST00000362588 141 ntBASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 RNU6-1010P-201ENST00000362757 107 ntBASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 RNA5SP322-201ENST00000363617 119 ntBASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 RNU6-1210P-201ENST00000363775 107 ntBASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 U8.15-201ENST00000390947 134 ntBASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 Y_RNA.609-201ENST00000410669 89 ntBASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 RNU2-40P-201ENST00000410833 196 ntBASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 Z98742.3-201ENST00000418637 326 ntBASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 S100A11P1-201ENST00000477525 312 ntBASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 AL049873.1-201ENST00000480540 376 ntBASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 RPL23AP63-201ENST00000498752 471 ntBASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 RNU6-1096P-201ENST00000517089 102 ntBASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 AC008507.4-201ENST00000585464 127 ntBASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 AC013412.1-201ENST00000610687 192 ntBASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPAS3Q8IXF0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 AC026241.1-201ENST00000517873 2142 ntBASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 SNORA14A-201ENST00000364773 135 ntBASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 RNU6-975P-201ENST00000384296 105 ntBASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 AC017083.1-201ENST00000428093 483 ntBASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 TRBV12-2-201ENST00000489763 344 ntBASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 AC090255.1-201ENST00000495779 349 ntBASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 MIR4438-201ENST00000585271 93 ntBASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 AC095038.3-201ENST00000634439 195 ntBASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPAS3Q8IXF0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 RNU6-661P-201ENST00000362409 107 ntBASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 RNU6-457P-201ENST00000363999 107 ntBASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 SNORD115-27-201ENST00000364430 82 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms