Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 RNU6-407P-201ENST00000365280 104 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 Y_RNA.490-201ENST00000384413 102 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 MIR329-1-201ENST00000385028 80 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 RNU1-139P-201ENST00000391307 165 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 RPL37P10-201ENST00000412884 288 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 EIF1P1-201ENST00000421436 341 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 EIF1P2-201ENST00000428233 350 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
VPS36Q86VN1 STAG3L5P-204ENST00000443759 179 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 RPS29P28-201ENST00000446439 141 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 MTND4P17-201ENST00000470444 350 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 RNU6-120P-201ENST00000516077 103 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 RNU7-30P-201ENST00000516835 62 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 Y_RNA.708-201ENST00000516950 96 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 AL512310.8-201ENST00000550183 120 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 AL121579.1-201ENST00000555129 305 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.22□□□□□ -2.21
VPS36Q86VN1 AC090617.3-201ENST00000573670 475 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 MIR4778-201ENST00000577635 80 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 MIR5701-3-201ENST00000578890 82 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 MIR5701-1-201ENST00000585138 82 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 MIR5701-2-201ENST00000615634 82 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 PISRT1.1-201ENST00000616930 107 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 AC068647.2-201ENST00000637380 353 ntBASIC1.22□□□□□ -2.21
VPS36Q86VN1 Y_RNA.88-201ENST00000363029 99 ntBASIC1.21□□□□□ -2.22
VPS36Q86VN1 Y_RNA.226-201ENST00000364337 114 ntBASIC1.21□□□□□ -2.22
VPS36Q86VN1 SNORA25.9-201ENST00000365087 128 ntBASIC1.21□□□□□ -2.22
VPS36Q86VN1 SNORA20B-201ENST00000384220 132 ntBASIC1.21□□□□□ -2.22
VPS36Q86VN1 AL355796.1-201ENST00000406706 323 ntBASIC1.21□□□□□ -2.22
VPS36Q86VN1 DYNLT3P2-201ENST00000442517 295 ntBASIC1.21□□□□□ -2.22
VPS36Q86VN1 MRPS10P1-201ENST00000448483 130 ntBASIC1.21□□□□□ -2.22
VPS36Q86VN1 AC093852.1-201ENST00000503587 266 ntBASIC1.21□□□□□ -2.22
VPS36Q86VN1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS36Q86VN1 SCARNA16.2-201ENST00000516520 172 ntBASIC1.21□□□□□ -2.22
VPS36Q86VN1 RNU6-358P-201ENST00000516564 75 ntBASIC1.21□□□□□ -2.22
VPS36Q86VN1 AC080078.3-201ENST00000605407 463 ntBASIC1.21□□□□□ -2.22
VPS36Q86VN1 AL050343.2-201ENST00000607338 280 ntBASIC1.21□□□□□ -2.22
VPS36Q86VN1 SNORD3E-202ENST00000627253 216 ntBASIC1.21□□□□□ -2.22
VPS36Q86VN1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
VPS36Q86VN1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
VPS36Q86VN1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
VPS36Q86VN1 Y_RNA.267-201ENST00000364679 109 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 Y_RNA.364-201ENST00000365532 101 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 Y_RNA.498-201ENST00000384460 102 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 RNU6-950P-201ENST00000384651 107 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 RNU6-136P-201ENST00000384663 107 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 MIR618-201ENST00000385287 98 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 SNORA12.1-201ENST00000390873 148 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 ELOCP21-201ENST00000412558 336 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 PGBD4P5-201ENST00000445958 426 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS36Q86VN1 AC010598.1-201ENST00000510378 103 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 AC046134.1-201ENST00000514454 666 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 RN7SKP88-201ENST00000516847 250 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 RNU7-172P-201ENST00000517125 64 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS36Q86VN1 AC060780.3-201ENST00000589464 80 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 AL390123.1-201ENST00000603216 237 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 7SK.8-201ENST00000612110 250 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 7SK.11-201ENST00000615477 250 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 7SK.13-201ENST00000622040 250 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 AC073544.1-201ENST00000600110 1595 ntBASIC1.2□□□□□ -2.22
VPS36Q86VN1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.19□□□□□ -2.22
VPS36Q86VN1 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
VPS36Q86VN1 Y_RNA.339-201ENST00000365325 102 ntBASIC1.19□□□□□ -2.22
VPS36Q86VN1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.19□□□□□ -2.22
VPS36Q86VN1 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
VPS36Q86VN1 AL133373.1-201ENST00000497098 94 ntBASIC1.19□□□□□ -2.22
VPS36Q86VN1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.19□□□□□ -2.22
VPS36Q86VN1 CASC19-280ENST00000642102 1351 ntBASIC1.19□□□□□ -2.22
VPS36Q86VN1 RNU6-99P-201ENST00000364721 107 ntBASIC1.18□□□□□ -2.22
VPS36Q86VN1 RNU6-1145P-201ENST00000384246 107 ntBASIC1.18□□□□□ -2.22
VPS36Q86VN1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
VPS36Q86VN1 SNORA75.4-201ENST00000391278 119 ntBASIC1.18□□□□□ -2.22
VPS36Q86VN1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
VPS36Q86VN1 AL034345.1-201ENST00000407768 123 ntBASIC1.18□□□□□ -2.22
VPS36Q86VN1 MIR1287-201ENST00000408492 90 ntBASIC1.18□□□□□ -2.22
VPS36Q86VN1 RNU4-14P-201ENST00000410858 122 ntBASIC1.18□□□□□ -2.22
VPS36Q86VN1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.18□□□□□ -2.22
VPS36Q86VN1 MTCYBP10-201ENST00000424905 650 ntBASIC1.18□□□□□ -2.22
VPS36Q86VN1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.18□□□□□ -2.22
VPS36Q86VN1 PCNPP5-201ENST00000452246 481 ntBASIC1.18□□□□□ -2.22
VPS36Q86VN1 AC092991.1-201ENST00000477176 376 ntBASIC1.18□□□□□ -2.22
VPS36Q86VN1 RNU6-922P-201ENST00000516753 99 ntBASIC1.18□□□□□ -2.22
VPS36Q86VN1 AC018448.1-201ENST00000552843 316 ntBASIC1.18□□□□□ -2.22
VPS36Q86VN1 MIR3664-201ENST00000579074 99 ntBASIC1.18□□□□□ -2.22
VPS36Q86VN1 AC104260.1-201ENST00000616660 539 ntBASIC1.18□□□□□ -2.22
VPS36Q86VN1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.18□□□□□ -2.22
VPS36Q86VN1 MIR8065-201ENST00000620577 100 ntBASIC1.18□□□□□ -2.22
VPS36Q86VN1 AC092794.2-201ENST00000620933 563 ntBASIC1.18□□□□□ -2.22
VPS36Q86VN1 Y_RNA.160-201ENST00000363677 92 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 Y_RNA.265-201ENST00000364677 108 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
VPS36Q86VN1 Y_RNA.482-201ENST00000384377 111 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 MIR499A-201ENST00000384903 122 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 RNU6-192P-201ENST00000391253 100 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 RNU6-876P-201ENST00000391295 104 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.17□□□□□ -2.22
VPS36Q86VN1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms