Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.96□□□□□ -2.26
ZNF546Q86UE3 U8.22-201ENST00000459141 133 ntBASIC0.96□□□□□ -2.26
ZNF546Q86UE3 AC091021.1-201ENST00000468051 388 ntBASIC0.96□□□□□ -2.26
ZNF546Q86UE3 AC004223.1-201ENST00000479840 271 ntBASIC0.96□□□□□ -2.26
ZNF546Q86UE3 RPL7P42-201ENST00000481005 679 ntBASIC0.96□□□□□ -2.26
ZNF546Q86UE3 RNU6-358P-201ENST00000516564 75 ntBASIC0.96□□□□□ -2.26
ZNF546Q86UE3 MIR6715A-201ENST00000615929 79 ntBASIC0.96□□□□□ -2.26
ZNF546Q86UE3 AC106754.2-201ENST00000623006 233 ntBASIC0.96□□□□□ -2.26
ZNF546Q86UE3 Y_RNA.88-201ENST00000363029 99 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 RNU1-124P-201ENST00000363861 145 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 RNU6-879P-201ENST00000364328 108 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 RNU4-76P-201ENST00000364509 141 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 RNU6-407P-201ENST00000365280 104 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 Y_RNA.404-201ENST00000383978 102 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 RNU6-424P-201ENST00000384367 105 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 Y_RNA.482-201ENST00000384377 111 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 MTCYBP4-201ENST00000401524 249 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 MRPL35P3-201ENST00000421557 364 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 MTND1P4-201ENST00000435196 415 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.95□□□□□ -2.26
ZNF546Q86UE3 snoU13.23-201ENST00000458863 104 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.95□□□□□ -2.26
ZNF546Q86UE3 SNORD116-28-201ENST00000516123 91 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 RN7SKP49-201ENST00000516675 260 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 RNU6-922P-201ENST00000516753 99 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 AP002001.1-203ENST00000534002 267 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 AC018448.1-201ENST00000552843 316 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 MIR4778-201ENST00000577635 80 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 MIR4298-201ENST00000584380 73 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 AC091178.2-201ENST00000584401 117 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 MIR3660-201ENST00000584845 100 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 AC084782.3-201ENST00000612282 578 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
ZNF546Q86UE3 RNU6-318P-201ENST00000384283 103 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 FCF1P9-201ENST00000412546 282 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.94□□□□□ -2.26
ZNF546Q86UE3 RAB28P5-201ENST00000427490 651 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 CALM2P4-201ENST00000430810 426 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 RNU6-625P-201ENST00000459412 107 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 OR9P1P-201ENST00000496431 281 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AC116353.2-201ENST00000505332 712 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 RNA5SP20-201ENST00000515976 84 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 RNU2-56P-201ENST00000516826 190 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 RNU6-341P-201ENST00000516973 96 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AC022868.1-201ENST00000517767 391 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 RPL21P9-201ENST00000556149 474 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AC011712.1-201ENST00000588959 234 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AL513534.2-201ENST00000603836 250 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AL353997.5-201ENST00000618886 171 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AC012676.2-201ENST00000619258 186 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AC027335.2-201ENST00000624030 375 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 RNU6-199P-201ENST00000362954 107 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 RNU1-17P-201ENST00000363022 152 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 Y_RNA.265-201ENST00000364677 108 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 Y_RNA.358-201ENST00000365491 99 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 SNORA25-201ENST00000384384 134 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 RNU6-376P-201ENST00000384731 106 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 MIR562-201ENST00000384894 95 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC092423.1-201ENST00000430165 186 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AL137792.2-201ENST00000443484 235 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 PCNPP5-201ENST00000452246 481 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.93□□□□□ -2.26
ZNF546Q86UE3 SNORA40.9-201ENST00000515895 93 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 SCARNA16.2-201ENST00000516520 172 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 RNA5SP168-201ENST00000516642 112 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC015712.3-201ENST00000559380 164 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC005899.2-201ENST00000584353 90 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AL022345.2-201ENST00000606307 135 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC005828.6-201ENST00000606610 232 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 U6.115-201ENST00000636045 103 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC027514.1-201ENST00000588561 1603 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
ZNF546Q86UE3 SNORA1B-201ENST00000362535 133 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.92□□□□□ -2.26
ZNF546Q86UE3 Y_RNA.498-201ENST00000384460 102 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 MIR653-201ENST00000385279 96 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 SNORD41-201ENST00000386967 70 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
ZNF546Q86UE3 U8.16-201ENST00000391279 133 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 MIR873-201ENST00000401120 77 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 FGF7P6-202ENST00000451282 293 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.92□□□□□ -2.26
ZNF546Q86UE3 UBL5P1-201ENST00000507979 193 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 RNU6-1278P-201ENST00000516130 107 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 RNU6-307P-201ENST00000516743 106 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 RNU7-28P-201ENST00000516759 62 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 AP002004.2-201ENST00000531656 154 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 MIR4524B-201ENST00000581569 115 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 BX284668.6-201ENST00000606899 438 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 GHRLOS.1-201ENST00000610995 70 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 AC092794.2-201ENST00000620933 563 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 MIR3674-201ENST00000636576 68 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 Y_RNA.124-201ENST00000363339 93 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms