Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.96□□□□□ -2.26
ZNF546Q86UE3 U8.22-201ENST00000459141 133 ntBASIC0.96□□□□□ -2.26
ZNF546Q86UE3 AC091021.1-201ENST00000468051 388 ntBASIC0.96□□□□□ -2.26
ZNF546Q86UE3 AC004223.1-201ENST00000479840 271 ntBASIC0.96□□□□□ -2.26
ZNF546Q86UE3 RPL7P42-201ENST00000481005 679 ntBASIC0.96□□□□□ -2.26
ZNF546Q86UE3 RNU6-358P-201ENST00000516564 75 ntBASIC0.96□□□□□ -2.26
ZNF546Q86UE3 MIR6715A-201ENST00000615929 79 ntBASIC0.96□□□□□ -2.26
ZNF546Q86UE3 AC106754.2-201ENST00000623006 233 ntBASIC0.96□□□□□ -2.26
ZNF546Q86UE3 Y_RNA.88-201ENST00000363029 99 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 RNU1-124P-201ENST00000363861 145 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 RNU6-879P-201ENST00000364328 108 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 RNU4-76P-201ENST00000364509 141 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 RNU6-407P-201ENST00000365280 104 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 Y_RNA.404-201ENST00000383978 102 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 RNU6-424P-201ENST00000384367 105 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 Y_RNA.482-201ENST00000384377 111 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 MTCYBP4-201ENST00000401524 249 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 MRPL35P3-201ENST00000421557 364 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 MTND1P4-201ENST00000435196 415 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.95□□□□□ -2.26
ZNF546Q86UE3 snoU13.23-201ENST00000458863 104 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.95□□□□□ -2.26
ZNF546Q86UE3 SNORD116-28-201ENST00000516123 91 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 RN7SKP49-201ENST00000516675 260 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 RNU6-922P-201ENST00000516753 99 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 AP002001.1-203ENST00000534002 267 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 AC018448.1-201ENST00000552843 316 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 MIR4778-201ENST00000577635 80 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 MIR4298-201ENST00000584380 73 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 AC091178.2-201ENST00000584401 117 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 MIR3660-201ENST00000584845 100 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 AC084782.3-201ENST00000612282 578 ntBASIC0.95□□□□□ -2.26
ZNF546Q86UE3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
ZNF546Q86UE3 RNU6-318P-201ENST00000384283 103 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 FCF1P9-201ENST00000412546 282 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.94□□□□□ -2.26
ZNF546Q86UE3 RAB28P5-201ENST00000427490 651 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 CALM2P4-201ENST00000430810 426 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 RNU6-625P-201ENST00000459412 107 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 OR9P1P-201ENST00000496431 281 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AC116353.2-201ENST00000505332 712 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 RNA5SP20-201ENST00000515976 84 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 RNU2-56P-201ENST00000516826 190 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 RNU6-341P-201ENST00000516973 96 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AC022868.1-201ENST00000517767 391 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 RPL21P9-201ENST00000556149 474 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AC011712.1-201ENST00000588959 234 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AL513534.2-201ENST00000603836 250 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AL353997.5-201ENST00000618886 171 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AC012676.2-201ENST00000619258 186 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 AC027335.2-201ENST00000624030 375 ntBASIC0.94□□□□□ -2.26
ZNF546Q86UE3 RNU6-199P-201ENST00000362954 107 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 RNU1-17P-201ENST00000363022 152 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 Y_RNA.265-201ENST00000364677 108 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 Y_RNA.358-201ENST00000365491 99 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 SNORA25-201ENST00000384384 134 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 RNU6-376P-201ENST00000384731 106 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 MIR562-201ENST00000384894 95 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC092423.1-201ENST00000430165 186 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AL137792.2-201ENST00000443484 235 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 PCNPP5-201ENST00000452246 481 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.93□□□□□ -2.26
ZNF546Q86UE3 SNORA40.9-201ENST00000515895 93 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 SCARNA16.2-201ENST00000516520 172 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 RNA5SP168-201ENST00000516642 112 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC015712.3-201ENST00000559380 164 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC005899.2-201ENST00000584353 90 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AL022345.2-201ENST00000606307 135 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC005828.6-201ENST00000606610 232 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 U6.115-201ENST00000636045 103 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 AC027514.1-201ENST00000588561 1603 ntBASIC0.93□□□□□ -2.26
ZNF546Q86UE3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
ZNF546Q86UE3 SNORA1B-201ENST00000362535 133 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.92□□□□□ -2.26
ZNF546Q86UE3 Y_RNA.498-201ENST00000384460 102 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 MIR653-201ENST00000385279 96 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 SNORD41-201ENST00000386967 70 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
ZNF546Q86UE3 U8.16-201ENST00000391279 133 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 MIR873-201ENST00000401120 77 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 FGF7P6-202ENST00000451282 293 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.92□□□□□ -2.26
ZNF546Q86UE3 UBL5P1-201ENST00000507979 193 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 RNU6-1278P-201ENST00000516130 107 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 RNU6-307P-201ENST00000516743 106 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 RNU7-28P-201ENST00000516759 62 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 AP002004.2-201ENST00000531656 154 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 MIR4524B-201ENST00000581569 115 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 BX284668.6-201ENST00000606899 438 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 GHRLOS.1-201ENST00000610995 70 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 AC092794.2-201ENST00000620933 563 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 MIR3674-201ENST00000636576 68 ntBASIC0.92□□□□□ -2.26
ZNF546Q86UE3 Y_RNA.124-201ENST00000363339 93 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms