Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 MTND2P29-201ENST00000438595 412 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 SNORD109B-201ENST00000458961 67 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 SNORD109A-201ENST00000459128 67 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 RNU7-141P-201ENST00000459304 62 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 SNORA4.4-201ENST00000515921 135 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-1219P-201ENST00000516143 112 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 RNA5SP76-201ENST00000516277 87 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-1337P-201ENST00000516525 95 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 AC108706.1-201ENST00000611053 297 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 Y_RNA.802-201ENST00000614892 130 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 Y_RNA.75-201ENST00000362927 97 ntBASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 Y_RNA.124-201ENST00000363339 93 ntBASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-1205P-201ENST00000363625 106 ntBASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-1323P-201ENST00000384025 107 ntBASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-381P-201ENST00000391259 108 ntBASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 AC010531.2-201ENST00000465012 153 ntBASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 AC005840.1-201ENST00000498412 377 ntBASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 AC074198.2-201ENST00000508153 258 ntBASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 RNA5SP20-201ENST00000515976 84 ntBASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 RNU7-116P-201ENST00000516940 62 ntBASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 PRELID2P1-201ENST00000552837 301 ntBASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 MIR3117-201ENST00000584034 78 ntBASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 U4atac.1-201ENST00000618345 95 ntBASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 MIR6733-201ENST00000635723 61 ntBASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 CENPCP1-201ENST00000533085 2578 ntBASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 AC134026.1-201ENST00000623249 2239 ntBASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RUFY4Q6ZNE9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
RUFY4Q6ZNE9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.12□□□□□ -1.91
RUFY4Q6ZNE9 RNU4-82P-201ENST00000362443 140 ntBASIC3.12□□□□□ -1.91
RUFY4Q6ZNE9 Y_RNA.23-201ENST00000362496 106 ntBASIC3.12□□□□□ -1.91
RUFY4Q6ZNE9 Y_RNA.293-201ENST00000364908 93 ntBASIC3.12□□□□□ -1.91
RUFY4Q6ZNE9 MIR196B-201ENST00000384852 84 ntBASIC3.12□□□□□ -1.91
RUFY4Q6ZNE9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.12□□□□□ -1.91
RUFY4Q6ZNE9 Y_RNA.703-201ENST00000516846 111 ntBASIC3.12□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-255P-201ENST00000516957 105 ntBASIC3.12□□□□□ -1.91
RUFY4Q6ZNE9 AC021269.2-201ENST00000532318 330 ntBASIC3.12□□□□□ -1.91
RUFY4Q6ZNE9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RUFY4Q6ZNE9 MIR627-201ENST00000384979 97 ntBASIC3.11□□□□□ -1.91
RUFY4Q6ZNE9 AL138827.1-201ENST00000402666 306 ntBASIC3.11□□□□□ -1.91
RUFY4Q6ZNE9 AL590004.2-201ENST00000404787 371 ntBASIC3.11□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-394P-201ENST00000410735 107 ntBASIC3.11□□□□□ -1.91
RUFY4Q6ZNE9 RN7SKP51-201ENST00000410781 304 ntBASIC3.11□□□□□ -1.91
RUFY4Q6ZNE9 SRIP3-201ENST00000413200 219 ntBASIC3.11□□□□□ -1.91
RUFY4Q6ZNE9 HSPE1P21-201ENST00000438283 308 ntBASIC3.11□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-1278P-201ENST00000516130 107 ntBASIC3.11□□□□□ -1.91
RUFY4Q6ZNE9 RNU7-115P-201ENST00000516433 55 ntBASIC3.11□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-856P-201ENST00000516959 98 ntBASIC3.11□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-789P-201ENST00000517105 102 ntBASIC3.11□□□□□ -1.91
RUFY4Q6ZNE9 AP003357.1-201ENST00000604497 148 ntBASIC3.11□□□□□ -1.91
RUFY4Q6ZNE9 AC005972.2-201ENST00000604690 348 ntBASIC3.11□□□□□ -1.91
RUFY4Q6ZNE9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.11□□□□□ -1.91
RUFY4Q6ZNE9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-1048P-201ENST00000364054 107 ntBASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-407P-201ENST00000365280 104 ntBASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 RNY1P5-201ENST00000383890 115 ntBASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 MIR518C-201ENST00000384822 101 ntBASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-1135P-201ENST00000411083 103 ntBASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 AC016909.1-201ENST00000415916 166 ntBASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 RPL39P40-201ENST00000445481 146 ntBASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 AC091021.1-201ENST00000468051 388 ntBASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 RPS27AP9-201ENST00000477681 438 ntBASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 NDUFA5P6-201ENST00000542110 379 ntBASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 MIR548AY-201ENST00000617669 107 ntBASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
RUFY4Q6ZNE9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 RNU2-2P-201ENST00000410396 191 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 RPS29P6-201ENST00000438196 145 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 AL445687.1-201ENST00000439946 251 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 AC018868.1-201ENST00000491307 315 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-1146P-201ENST00000516282 102 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 SNORA31.26-201ENST00000517250 137 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 RNU2-4P-201ENST00000606190 192 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 AC004832.4-201ENST00000608952 331 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 U2.15-201ENST00000611544 191 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 U2.16-201ENST00000613119 191 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 U2.12-201ENST00000613778 191 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 U2.9-201ENST00000615427 191 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 603.5 ms