Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 WWP1P1-201ENST00000466609 2769 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
ZNF544Q6NX49 AC005592.1-201ENST00000566527 1640 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 RNU6-23P-201ENST00000363283 107 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 RNU6-457P-201ENST00000363999 107 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 SNORA22B-201ENST00000383876 138 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
ZNF544Q6NX49 RNU6-308P-201ENST00000390957 107 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 AC016909.1-201ENST00000415916 166 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 AC005534.2-201ENST00000431047 433 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 UQCRBP2-201ENST00000447827 297 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 FCF1P4-201ENST00000448326 183 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.41□□□□□ -2.18
ZNF544Q6NX49 AL163540.1-201ENST00000485382 386 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 AC010469.2-201ENST00000496412 480 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.41□□□□□ -2.18
ZNF544Q6NX49 SUMO2P18-201ENST00000518873 252 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 RNU6-988P-201ENST00000519081 107 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 SNORD53B-201ENST00000577887 78 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.41□□□□□ -2.18
ZNF544Q6NX49 MIR4719-201ENST00000585233 84 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 AC005786.1-201ENST00000588553 154 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 U6.92-201ENST00000636464 89 ntBASIC1.41□□□□□ -2.18
ZNF544Q6NX49 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
ZNF544Q6NX49 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ZNF544Q6NX49 MIR378A-201ENST00000362177 66 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 RNU6-694P-201ENST00000364071 147 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 AC117470.1-201ENST00000381974 330 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 RNU6-708P-201ENST00000384217 107 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 MIR320A-201ENST00000385302 82 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.645-201ENST00000391229 102 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 AL117342.1-201ENST00000404861 406 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 AC060773.1-201ENST00000421698 310 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 AC016717.1-201ENST00000448918 286 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.4□□□□□ -2.19
ZNF544Q6NX49 AC108729.3-201ENST00000513484 108 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 AC025647.1-201ENST00000517879 253 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 AC022616.4-201ENST00000522985 181 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.4□□□□□ -2.19
ZNF544Q6NX49 AP002001.1-203ENST00000534002 267 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.4□□□□□ -2.19
ZNF544Q6NX49 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.4□□□□□ -2.19
ZNF544Q6NX49 AC022254.1-201ENST00000567857 235 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 MIR3684-201ENST00000579779 74 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.4□□□□□ -2.19
ZNF544Q6NX49 AL121655.1-201ENST00000605811 308 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.4□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.361-201ENST00000365515 120 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.485-201ENST00000384395 102 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 MIR597-201ENST00000384968 97 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 SNORA48.1-201ENST00000390879 135 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 SNORA17.3-201ENST00000391159 129 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 MRPL42P3-201ENST00000401492 326 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 AL078595.1-201ENST00000404458 226 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 AC008134.1-201ENST00000420943 193 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 RAB28P5-201ENST00000427490 651 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 AC011406.1-201ENST00000512440 370 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 AC040926.1-201ENST00000530195 238 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 MIR4498-201ENST00000577599 66 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 MIR4423-201ENST00000580922 80 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 AL356055.1-201ENST00000602528 446 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 BX248123.2-201ENST00000606318 124 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 AC005828.6-201ENST00000606610 232 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.39□□□□□ -2.19
ZNF544Q6NX49 AC240442.1-201ENST00000616055 283 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 AC022140.2-201ENST00000623500 188 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 AC006435.5-201ENST00000624486 112 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
ZNF544Q6NX49 AL159152.1-201ENST00000635019 2587 ntBASIC1.39□□□□□ -2.19
ZNF544Q6NX49 AC091812.1-201ENST00000432235 1948 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.158-201ENST00000363651 101 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 RNU6-961P-201ENST00000363893 105 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.202-201ENST00000364083 110 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 RNU4-50P-201ENST00000364361 141 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 SNORA63.7-201ENST00000365579 123 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 SNORD14.1-201ENST00000365609 90 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.458-201ENST00000384240 102 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 MIR517C-201ENST00000385103 95 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 RNU6-57P-201ENST00000411348 103 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 ATP5J2P3-201ENST00000451550 258 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 RNU6-625P-201ENST00000459412 107 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 RNU6-1153P-201ENST00000516760 105 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.38□□□□□ -2.19
ZNF544Q6NX49 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.38□□□□□ -2.19
ZNF544Q6NX49 MIR4659A-201ENST00000580269 81 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 snoU13.31-201ENST00000607291 104 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 AL512598.1-201ENST00000610158 273 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 MIR3674-201ENST00000636576 68 ntBASIC1.38□□□□□ -2.19
ZNF544Q6NX49 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
ZNF544Q6NX49 RNU6-661P-201ENST00000362409 107 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 snoU2-30.2-201ENST00000362805 70 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.216-201ENST00000364205 93 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.230-201ENST00000364348 109 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 RNU6-1240P-201ENST00000365155 104 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 SNORA33.2-201ENST00000365413 134 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 RNU6-1310P-201ENST00000384153 107 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms