Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.69□□□□□ -1.98
CCDC93Q567U6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC93Q567U6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC93Q567U6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CCDC93Q567U6 SNORD31B-201ENST00000364977 69 ntBASIC2.68□□□□□ -1.98
CCDC93Q567U6 MIR548B-201ENST00000385247 97 ntBASIC2.68□□□□□ -1.98
CCDC93Q567U6 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CCDC93Q567U6 AL590240.4-201ENST00000616908 390 ntBASIC2.68□□□□□ -1.98
CCDC93Q567U6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC93Q567U6 AC080100.1-201ENST00000624239 5356 ntBASIC2.68□□□□□ -1.98
CCDC93Q567U6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC93Q567U6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC93Q567U6 Y_RNA.446-201ENST00000384178 104 ntBASIC2.67□□□□□ -1.98
CCDC93Q567U6 SNORA40.19-201ENST00000390846 128 ntBASIC2.67□□□□□ -1.98
CCDC93Q567U6 SNORA53-201ENST00000391141 249 ntBASIC2.67□□□□□ -1.98
CCDC93Q567U6 RPL23AP3-201ENST00000453844 468 ntBASIC2.67□□□□□ -1.98
CCDC93Q567U6 MTND1P19-201ENST00000511780 315 ntBASIC2.67□□□□□ -1.98
CCDC93Q567U6 Y_RNA.680-201ENST00000516441 93 ntBASIC2.67□□□□□ -1.98
CCDC93Q567U6 RNA5SP137-201ENST00000516833 135 ntBASIC2.67□□□□□ -1.98
CCDC93Q567U6 MIR3128-201ENST00000581957 66 ntBASIC2.67□□□□□ -1.98
CCDC93Q567U6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC93Q567U6 MIR4753-201ENST00000585119 83 ntBASIC2.67□□□□□ -1.98
CCDC93Q567U6 AC008749.1-201ENST00000597650 306 ntBASIC2.67□□□□□ -1.98
CCDC93Q567U6 MIR6845-201ENST00000613182 61 ntBASIC2.67□□□□□ -1.98
CCDC93Q567U6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.67□□□□□ -1.98
CCDC93Q567U6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CCDC93Q567U6 RNU1-17P-201ENST00000363022 152 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 RNU6-379P-201ENST00000363813 104 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 Y_RNA.569-201ENST00000384749 103 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 AL357139.1-201ENST00000407792 426 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 MIR548H3-201ENST00000408771 118 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 RNU2-54P-201ENST00000410299 190 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 EDDM3CP-201ENST00000415977 425 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 AL445646.1-201ENST00000431784 216 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 AC114982.1-201ENST00000469402 321 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 SERF1AP1-201ENST00000514575 187 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 RNU6-1023P-201ENST00000516137 106 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 RNU6-155P-201ENST00000516347 100 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 RNU6-966P-201ENST00000516479 104 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 RNU7-193P-201ENST00000516723 65 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 SCARNA24.2-201ENST00000516968 130 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC93Q567U6 AC026271.5-201ENST00000577873 130 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 MIR4529-201ENST00000578110 78 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 MIR6895-201ENST00000613497 78 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 AC009831.4-201ENST00000620744 325 ntBASIC2.66□□□□□ -1.98
CCDC93Q567U6 RNU6-454P-201ENST00000364292 107 ntBASIC2.65□□□□□ -1.99
CCDC93Q567U6 RNU6-326P-201ENST00000365480 107 ntBASIC2.65□□□□□ -1.99
CCDC93Q567U6 Y_RNA.477-201ENST00000384352 108 ntBASIC2.65□□□□□ -1.99
CCDC93Q567U6 RNU6-1199P-201ENST00000411249 104 ntBASIC2.65□□□□□ -1.99
CCDC93Q567U6 CYCSP49-201ENST00000420810 319 ntBASIC2.65□□□□□ -1.99
CCDC93Q567U6 POLR2KP2-201ENST00000438155 177 ntBASIC2.65□□□□□ -1.99
CCDC93Q567U6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC93Q567U6 AC074290.1-201ENST00000448883 135 ntBASIC2.65□□□□□ -1.99
CCDC93Q567U6 AC016925.1-201ENST00000458303 298 ntBASIC2.65□□□□□ -1.99
CCDC93Q567U6 RNU2-31P-201ENST00000516954 155 ntBASIC2.65□□□□□ -1.99
CCDC93Q567U6 RNA5SP490-201ENST00000517141 136 ntBASIC2.65□□□□□ -1.99
CCDC93Q567U6 RNU2-12P-201ENST00000517216 168 ntBASIC2.65□□□□□ -1.99
CCDC93Q567U6 AC121758.2-201ENST00000553271 193 ntBASIC2.65□□□□□ -1.99
CCDC93Q567U6 AC006380.1-201ENST00000603598 186 ntBASIC2.65□□□□□ -1.99
CCDC93Q567U6 AC037487.3-201ENST00000606668 112 ntBASIC2.65□□□□□ -1.99
CCDC93Q567U6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CCDC93Q567U6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC93Q567U6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC93Q567U6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
CCDC93Q567U6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC93Q567U6 ZNF355P-201ENST00000427301 3216 ntBASIC2.64□□□□□ -1.99
CCDC93Q567U6 Y_RNA.60-201ENST00000362831 98 ntBASIC2.64□□□□□ -1.99
CCDC93Q567U6 Y_RNA.352-201ENST00000365439 102 ntBASIC2.64□□□□□ -1.99
CCDC93Q567U6 SNORA25B-201ENST00000365507 128 ntBASIC2.64□□□□□ -1.99
CCDC93Q567U6 RNU6-438P-201ENST00000365561 103 ntBASIC2.64□□□□□ -1.99
CCDC93Q567U6 Y_RNA.383-201ENST00000383855 97 ntBASIC2.64□□□□□ -1.99
CCDC93Q567U6 Y_RNA.478-201ENST00000384358 107 ntBASIC2.64□□□□□ -1.99
CCDC93Q567U6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC93Q567U6 RNU2-48P-201ENST00000410694 191 ntBASIC2.64□□□□□ -1.99
CCDC93Q567U6 HMGN2P18-201ENST00000450680 270 ntBASIC2.64□□□□□ -1.99
CCDC93Q567U6 MTND4LP30-201ENST00000454092 297 ntBASIC2.64□□□□□ -1.99
CCDC93Q567U6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC93Q567U6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC93Q567U6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC93Q567U6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC93Q567U6 RNU6-743P-201ENST00000364151 106 ntBASIC2.63□□□□□ -1.99
CCDC93Q567U6 SNORA20.1-201ENST00000364790 130 ntBASIC2.63□□□□□ -1.99
CCDC93Q567U6 RNU1-51P-201ENST00000365345 176 ntBASIC2.63□□□□□ -1.99
CCDC93Q567U6 Y_RNA.416-201ENST00000384014 113 ntBASIC2.63□□□□□ -1.99
CCDC93Q567U6 RNU6-975P-201ENST00000384296 105 ntBASIC2.63□□□□□ -1.99
CCDC93Q567U6 AL355497.1-201ENST00000406262 551 ntBASIC2.63□□□□□ -1.99
CCDC93Q567U6 MIR1185-2-201ENST00000408687 86 ntBASIC2.63□□□□□ -1.99
CCDC93Q567U6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC93Q567U6 RNU7-57P-201ENST00000459540 60 ntBASIC2.63□□□□□ -1.99
CCDC93Q567U6 AC108729.3-201ENST00000513484 108 ntBASIC2.63□□□□□ -1.99
CCDC93Q567U6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.63□□□□□ -1.99
CCDC93Q567U6 MIR4498-201ENST00000577599 66 ntBASIC2.63□□□□□ -1.99
CCDC93Q567U6 AC090425.1-201ENST00000610007 140 ntBASIC2.63□□□□□ -1.99
CCDC93Q567U6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC93Q567U6 SNORA25.1-201ENST00000362326 128 ntBASIC2.62□□□□□ -1.99
CCDC93Q567U6 Y_RNA.136-201ENST00000363444 102 ntBASIC2.62□□□□□ -1.99
CCDC93Q567U6 RNU6-1318P-201ENST00000365389 103 ntBASIC2.62□□□□□ -1.99
CCDC93Q567U6 MIR583-201ENST00000384846 75 ntBASIC2.62□□□□□ -1.99
CCDC93Q567U6 AL603910.2-201ENST00000407268 136 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms