Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 JTBP1-201ENST00000441314 247 ntBASIC1.43□□□□□ -2.18
PTCH1Q13635 RPL30P15-201ENST00000457129 321 ntBASIC1.43□□□□□ -2.18
PTCH1Q13635 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.43□□□□□ -2.18
PTCH1Q13635 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.43□□□□□ -2.18
PTCH1Q13635 MIR1273G-201ENST00000577677 100 ntBASIC1.43□□□□□ -2.18
PTCH1Q13635 AC005899.2-201ENST00000584353 90 ntBASIC1.43□□□□□ -2.18
PTCH1Q13635 AL160413.1-201ENST00000622780 310 ntBASIC1.43□□□□□ -2.18
PTCH1Q13635 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.43□□□□□ -2.18
PTCH1Q13635 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
PTCH1Q13635 AC009541.1-201ENST00000438279 2662 ntBASIC1.43□□□□□ -2.18
PTCH1Q13635 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
PTCH1Q13635 AL589743.1-201ENST00000551932 2712 ntBASIC1.43□□□□□ -2.18
PTCH1Q13635 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.43□□□□□ -2.18
PTCH1Q13635 RNU1-76P-201ENST00000362903 159 ntBASIC1.42□□□□□ -2.18
PTCH1Q13635 Y_RNA.123-201ENST00000363338 102 ntBASIC1.42□□□□□ -2.18
PTCH1Q13635 RNU6-271P-201ENST00000363858 105 ntBASIC1.42□□□□□ -2.18
PTCH1Q13635 SNORA36A-201ENST00000384221 132 ntBASIC1.42□□□□□ -2.18
PTCH1Q13635 SNORA75.6-201ENST00000391318 127 ntBASIC1.42□□□□□ -2.18
PTCH1Q13635 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.42□□□□□ -2.18
PTCH1Q13635 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.42□□□□□ -2.18
PTCH1Q13635 AC079354.2-201ENST00000453523 154 ntBASIC1.42□□□□□ -2.18
PTCH1Q13635 RPL26P26-201ENST00000480251 434 ntBASIC1.42□□□□□ -2.18
PTCH1Q13635 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.42□□□□□ -2.18
PTCH1Q13635 AC093303.1-201ENST00000514549 295 ntBASIC1.42□□□□□ -2.18
PTCH1Q13635 Y_RNA.701-201ENST00000516812 110 ntBASIC1.42□□□□□ -2.18
PTCH1Q13635 MRPS36P4-201ENST00000534436 298 ntBASIC1.42□□□□□ -2.18
PTCH1Q13635 AC016256.1-201ENST00000547971 354 ntBASIC1.42□□□□□ -2.18
PTCH1Q13635 AC108706.1-201ENST00000611053 297 ntBASIC1.42□□□□□ -2.18
PTCH1Q13635 MIR6857-201ENST00000613267 93 ntBASIC1.42□□□□□ -2.18
PTCH1Q13635 AC007742.2-201ENST00000618226 398 ntBASIC1.42□□□□□ -2.18
PTCH1Q13635 AC068205.3-201ENST00000636385 468 ntBASIC1.42□□□□□ -2.18
PTCH1Q13635 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
PTCH1Q13635 Y_RNA.48-201ENST00000362710 103 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 RNU6-862P-201ENST00000362804 105 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 RNU6-595P-201ENST00000363944 107 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 RNU6-1019P-201ENST00000364424 107 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 SNORD42.2-201ENST00000365570 69 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 Y_RNA.533-201ENST00000384596 114 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.41□□□□□ -2.18
PTCH1Q13635 RNU6-470P-201ENST00000515954 104 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 SCARNA16.2-201ENST00000516520 172 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 RNU6-307P-201ENST00000516743 106 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 RNA5SP481-201ENST00000516814 122 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 CBX3P8-201ENST00000532412 525 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 SNORA77B-201ENST00000578179 125 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 MIR3973-201ENST00000579824 107 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 AC044792.1-201ENST00000593294 196 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 SNORD114-21-201ENST00000606412 72 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 MIR8063-201ENST00000621930 81 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 AC022140.2-201ENST00000623500 188 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 SNORA43.4-201ENST00000629559 138 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 AC100821.1-201ENST00000523153 2479 ntBASIC1.41□□□□□ -2.18
PTCH1Q13635 Y_RNA.197-201ENST00000364004 102 ntBASIC1.4□□□□□ -2.18
PTCH1Q13635 RNU6-1286P-201ENST00000383871 107 ntBASIC1.4□□□□□ -2.18
PTCH1Q13635 RNU6-890P-201ENST00000384121 107 ntBASIC1.4□□□□□ -2.18
PTCH1Q13635 SNORA29-201ENST00000384183 140 ntBASIC1.4□□□□□ -2.18
PTCH1Q13635 AC243428.1-201ENST00000421099 264 ntBASIC1.4□□□□□ -2.18
PTCH1Q13635 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.4□□□□□ -2.18
PTCH1Q13635 MTND1P14-201ENST00000427400 950 ntBASIC1.4□□□□□ -2.18
PTCH1Q13635 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.4□□□□□ -2.18
PTCH1Q13635 AC010531.2-201ENST00000465012 153 ntBASIC1.4□□□□□ -2.18
PTCH1Q13635 RPL23AP75-201ENST00000491601 451 ntBASIC1.4□□□□□ -2.18
PTCH1Q13635 RNU6-1170P-201ENST00000515974 106 ntBASIC1.4□□□□□ -2.18
PTCH1Q13635 AL590095.2-201ENST00000604136 117 ntBASIC1.4□□□□□ -2.18
PTCH1Q13635 PRR13P7-201ENST00000605538 430 ntBASIC1.4□□□□□ -2.18
PTCH1Q13635 AL080274.1-201ENST00000605565 220 ntBASIC1.4□□□□□ -2.18
PTCH1Q13635 AC005014.2-201ENST00000607795 599 ntBASIC1.4□□□□□ -2.18
PTCH1Q13635 AC133104.2-201ENST00000615272 193 ntBASIC1.4□□□□□ -2.18
PTCH1Q13635 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.4□□□□□ -2.18
PTCH1Q13635 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.4□□□□□ -2.18
PTCH1Q13635 ZNF299P-201ENST00000406845 1804 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 SNORD33-201ENST00000362761 85 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 RNU5B-2P-201ENST00000363036 113 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 RNY1P16-201ENST00000363063 111 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 RNU1-96P-201ENST00000364163 162 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 Y_RNA.394-201ENST00000383942 103 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 Y_RNA.395-201ENST00000383945 109 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 MIR300-201ENST00000401138 83 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.4□□□□□ -2.19
PTCH1Q13635 AC099677.2-201ENST00000436385 175 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 snoU13.30-201ENST00000458951 104 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 Y_RNA.639-201ENST00000458981 102 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 RPL17P19-201ENST00000489069 552 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 RNU6-120P-201ENST00000516077 103 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 RNU6-902P-201ENST00000517212 91 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.4□□□□□ -2.19
PTCH1Q13635 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.4□□□□□ -2.19
PTCH1Q13635 MIR5701-3-201ENST00000578890 82 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 MIR5701-1-201ENST00000585138 82 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 MIR4719-201ENST00000585233 84 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
PTCH1Q13635 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 MIR5701-2-201ENST00000615634 82 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 AL627230.5-201ENST00000619807 58 ntBASIC1.4□□□□□ -2.19
PTCH1Q13635 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
PTCH1Q13635 Y_RNA.5-201ENST00000362334 102 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 RNU6-490P-201ENST00000362985 107 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 RNA5SP62-201ENST00000363457 110 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 RNU6-1040P-201ENST00000383974 107 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 RNU6-474P-201ENST00000384243 107 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 450.2 ms