Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 AC006539.3-201ENST00000454258 129 ntBASIC3.78□□□□□ -1.8
NR1H3Q13133 AC233266.1-201ENST00000454518 96 ntBASIC3.78□□□□□ -1.8
NR1H3Q13133 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H3Q13133 RN7SL807P-201ENST00000470923 297 ntBASIC3.78□□□□□ -1.8
NR1H3Q13133 HMGN1P7-201ENST00000491722 313 ntBASIC3.78□□□□□ -1.8
NR1H3Q13133 RNA5SP208-201ENST00000516156 78 ntBASIC3.78□□□□□ -1.8
NR1H3Q13133 AC007751.1-201ENST00000529260 376 ntBASIC3.78□□□□□ -1.8
NR1H3Q13133 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.78□□□□□ -1.8
NR1H3Q13133 MIR4679-2-201ENST00000578358 77 ntBASIC3.78□□□□□ -1.8
NR1H3Q13133 AL356280.1-201ENST00000603614 379 ntBASIC3.78□□□□□ -1.8
NR1H3Q13133 AC242852.1-201ENST00000612151 96 ntBASIC3.78□□□□□ -1.8
NR1H3Q13133 AC244015.1-201ENST00000622301 99 ntBASIC3.78□□□□□ -1.8
NR1H3Q13133 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
NR1H3Q13133 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
NR1H3Q13133 MFSD8-236ENST00000641509 4050 ntBASIC3.77□□□□□ -1.81
NR1H3Q13133 RNU6-508P-201ENST00000363231 103 ntBASIC3.77□□□□□ -1.81
NR1H3Q13133 RNU1-96P-201ENST00000364163 162 ntBASIC3.77□□□□□ -1.81
NR1H3Q13133 Y_RNA.346-201ENST00000365385 112 ntBASIC3.77□□□□□ -1.81
NR1H3Q13133 CYCSP4-201ENST00000429682 331 ntBASIC3.77□□□□□ -1.81
NR1H3Q13133 AC006028.1-201ENST00000438379 402 ntBASIC3.77□□□□□ -1.81
NR1H3Q13133 XIST_intron.1-201ENST00000619444 68 ntBASIC3.77□□□□□ -1.81
NR1H3Q13133 MIR7153-201ENST00000637758 57 ntBASIC3.77□□□□□ -1.81
NR1H3Q13133 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NR1H3Q13133 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NR1H3Q13133 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
NR1H3Q13133 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
NR1H3Q13133 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H3Q13133 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NR1H3Q13133 AL136360.1-201ENST00000503377 1900 ntBASIC3.76□□□□□ -1.81
NR1H3Q13133 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
NR1H3Q13133 SNORD9-201ENST00000362566 104 ntBASIC3.76□□□□□ -1.81
NR1H3Q13133 snoU2-30.2-201ENST00000362805 70 ntBASIC3.76□□□□□ -1.81
NR1H3Q13133 MIR491-201ENST00000384877 84 ntBASIC3.76□□□□□ -1.81
NR1H3Q13133 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.76□□□□□ -1.81
NR1H3Q13133 SNRPGP10-201ENST00000432323 225 ntBASIC3.76□□□□□ -1.81
NR1H3Q13133 NDUFA4P2-201ENST00000489989 244 ntBASIC3.76□□□□□ -1.81
NR1H3Q13133 MRPS17P9-201ENST00000511924 393 ntBASIC3.76□□□□□ -1.81
NR1H3Q13133 AC011406.1-201ENST00000512440 370 ntBASIC3.76□□□□□ -1.81
NR1H3Q13133 RNU7-99P-201ENST00000516271 62 ntBASIC3.76□□□□□ -1.81
NR1H3Q13133 RNU6-781P-201ENST00000516377 101 ntBASIC3.76□□□□□ -1.81
NR1H3Q13133 MIR3129-201ENST00000581095 76 ntBASIC3.76□□□□□ -1.81
NR1H3Q13133 AL355297.2-201ENST00000604792 129 ntBASIC3.76□□□□□ -1.81
NR1H3Q13133 AC004832.5-201ENST00000608677 401 ntBASIC3.76□□□□□ -1.81
NR1H3Q13133 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NR1H3Q13133 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NR1H3Q13133 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NR1H3Q13133 RNU6-1298P-201ENST00000362456 101 ntBASIC3.75□□□□□ -1.81
NR1H3Q13133 RNA5SP267-201ENST00000364893 126 ntBASIC3.75□□□□□ -1.81
NR1H3Q13133 AF228730.3-201ENST00000436691 102 ntBASIC3.75□□□□□ -1.81
NR1H3Q13133 AC018634.1-201ENST00000437554 401 ntBASIC3.75□□□□□ -1.81
NR1H3Q13133 RN7SKP19-201ENST00000516016 252 ntBASIC3.75□□□□□ -1.81
NR1H3Q13133 NDUFA5P6-201ENST00000542110 379 ntBASIC3.75□□□□□ -1.81
NR1H3Q13133 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.75□□□□□ -1.81
NR1H3Q13133 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.75□□□□□ -1.81
NR1H3Q13133 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NR1H3Q13133 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NR1H3Q13133 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
NR1H3Q13133 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.75□□□□□ -1.81
NR1H3Q13133 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NR1H3Q13133 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.75□□□□□ -1.81
NR1H3Q13133 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NR1H3Q13133 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
NR1H3Q13133 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NR1H3Q13133 MIR340-201ENST00000362125 95 ntBASIC3.74□□□□□ -1.81
NR1H3Q13133 Y_RNA.35-201ENST00000362601 101 ntBASIC3.74□□□□□ -1.81
NR1H3Q13133 Y_RNA.43-201ENST00000362670 111 ntBASIC3.74□□□□□ -1.81
NR1H3Q13133 RNU6-147P-201ENST00000383983 107 ntBASIC3.74□□□□□ -1.81
NR1H3Q13133 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.74□□□□□ -1.81
NR1H3Q13133 RPS29P12-201ENST00000460178 152 ntBASIC3.74□□□□□ -1.81
NR1H3Q13133 AC096725.1-201ENST00000514266 313 ntBASIC3.74□□□□□ -1.81
NR1H3Q13133 RNU6-1291P-201ENST00000516591 104 ntBASIC3.74□□□□□ -1.81
NR1H3Q13133 RNA5SP170-201ENST00000517150 101 ntBASIC3.74□□□□□ -1.81
NR1H3Q13133 MIR5195-201ENST00000583555 115 ntBASIC3.74□□□□□ -1.81
NR1H3Q13133 AC025166.1-201ENST00000612411 163 ntBASIC3.74□□□□□ -1.81
NR1H3Q13133 U6.98-201ENST00000637157 84 ntBASIC3.74□□□□□ -1.81
NR1H3Q13133 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NR1H3Q13133 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NR1H3Q13133 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
NR1H3Q13133 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NR1H3Q13133 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.74□□□□□ -1.81
NR1H3Q13133 RNA5SP42-201ENST00000364278 115 ntBASIC3.73□□□□□ -1.81
NR1H3Q13133 Y_RNA.253-201ENST00000364562 112 ntBASIC3.73□□□□□ -1.81
NR1H3Q13133 SNORA9-201ENST00000384215 133 ntBASIC3.73□□□□□ -1.81
NR1H3Q13133 RNVU1-14-201ENST00000384770 164 ntBASIC3.73□□□□□ -1.81
NR1H3Q13133 MIR561-201ENST00000385216 97 ntBASIC3.73□□□□□ -1.81
NR1H3Q13133 SNORA12.1-201ENST00000390873 148 ntBASIC3.73□□□□□ -1.81
NR1H3Q13133 Y_RNA.649-201ENST00000459077 103 ntBASIC3.73□□□□□ -1.81
NR1H3Q13133 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.73□□□□□ -1.81
NR1H3Q13133 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.73□□□□□ -1.81
NR1H3Q13133 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.73□□□□□ -1.81
NR1H3Q13133 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.73□□□□□ -1.81
NR1H3Q13133 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.73□□□□□ -1.81
NR1H3Q13133 AL359075.3-201ENST00000613288 217 ntBASIC3.73□□□□□ -1.81
NR1H3Q13133 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.73□□□□□ -1.81
NR1H3Q13133 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NR1H3Q13133 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.73□□□□□ -1.81
NR1H3Q13133 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NR1H3Q13133 SNORA1-201ENST00000384107 130 ntBASIC3.72□□□□□ -1.81
NR1H3Q13133 RNU6-880P-201ENST00000384526 107 ntBASIC3.72□□□□□ -1.81
NR1H3Q13133 RNU2-48P-201ENST00000410694 191 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms