Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNA5SP127-201ENST00000411051 133 ntBASIC-0.67□□□□□ -2.52
RPS28P62857 AC069271.1-201ENST00000445577 156 ntBASIC-0.67□□□□□ -2.52
RPS28P62857 ZNF114P1-201ENST00000453500 292 ntBASIC-0.67□□□□□ -2.52
RPS28P62857 AC079354.2-201ENST00000453523 154 ntBASIC-0.67□□□□□ -2.52
RPS28P62857 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.67□□□□□ -2.52
RPS28P62857 AC090897.1-201ENST00000580909 226 ntBASIC-0.67□□□□□ -2.52
RPS28P62857 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.67□□□□□ -2.52
RPS28P62857 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.68□□□□□ -2.52
RPS28P62857 MIR487A-201ENST00000385009 80 ntBASIC-0.68□□□□□ -2.52
RPS28P62857 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.68□□□□□ -2.52
RPS28P62857 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.68□□□□□ -2.52
RPS28P62857 AC087499.4-201ENST00000448505 178 ntBASIC-0.68□□□□□ -2.52
RPS28P62857 SUMO1P2-201ENST00000452524 304 ntBASIC-0.68□□□□□ -2.52
RPS28P62857 RPS29P15-201ENST00000458329 171 ntBASIC-0.68□□□□□ -2.52
RPS28P62857 RNU6-410P-201ENST00000517006 107 ntBASIC-0.68□□□□□ -2.52
RPS28P62857 AL358944.1-201ENST00000528537 144 ntBASIC-0.68□□□□□ -2.52
RPS28P62857 AGGF1P4-201ENST00000568249 801 ntBASIC-0.68□□□□□ -2.52
RPS28P62857 AP000753.3-201ENST00000604083 169 ntBASIC-0.68□□□□□ -2.52
RPS28P62857 MIR499B-201ENST00000636498 73 ntBASIC-0.68□□□□□ -2.52
RPS28P62857 RNU6-727P-201ENST00000363592 107 ntBASIC-0.69□□□□□ -2.52
RPS28P62857 RNU6-931P-201ENST00000363850 107 ntBASIC-0.69□□□□□ -2.52
RPS28P62857 RNU6-660P-201ENST00000364566 109 ntBASIC-0.69□□□□□ -2.52
RPS28P62857 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.69□□□□□ -2.52
RPS28P62857 RNU6-187P-201ENST00000384139 106 ntBASIC-0.69□□□□□ -2.52
RPS28P62857 RNY1P14-201ENST00000384426 108 ntBASIC-0.69□□□□□ -2.52
RPS28P62857 RNU6-205P-201ENST00000390858 107 ntBASIC-0.69□□□□□ -2.52
RPS28P62857 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.69□□□□□ -2.52
RPS28P62857 RNA5SP163-201ENST00000410304 99 ntBASIC-0.69□□□□□ -2.52
RPS28P62857 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.69□□□□□ -2.52
RPS28P62857 U8.21-201ENST00000459536 136 ntBASIC-0.69□□□□□ -2.52
RPS28P62857 SNORA26.10-201ENST00000516427 141 ntBASIC-0.69□□□□□ -2.52
RPS28P62857 RNA5SP54-201ENST00000516951 92 ntBASIC-0.69□□□□□ -2.52
RPS28P62857 MIR3941-201ENST00000582572 103 ntBASIC-0.69□□□□□ -2.52
RPS28P62857 FGF7P1-201ENST00000582820 288 ntBASIC-0.69□□□□□ -2.52
RPS28P62857 AC011712.1-201ENST00000588959 234 ntBASIC-0.69□□□□□ -2.52
RPS28P62857 AL391099.1-201ENST00000624635 187 ntBASIC-0.69□□□□□ -2.52
RPS28P62857 RNU4-84P-201ENST00000364200 139 ntBASIC-0.7□□□□□ -2.52
RPS28P62857 MT-TN-201ENST00000387400 73 ntBASIC-0.7□□□□□ -2.52
RPS28P62857 AL390729.2-201ENST00000416137 156 ntBASIC-0.7□□□□□ -2.52
RPS28P62857 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.7□□□□□ -2.52
RPS28P62857 MTND4P18-201ENST00000447010 465 ntBASIC-0.7□□□□□ -2.52
RPS28P62857 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.7□□□□□ -2.52
RPS28P62857 AC114755.3-201ENST00000481111 251 ntBASIC-0.7□□□□□ -2.52
RPS28P62857 AC016550.1-201ENST00000505348 785 ntBASIC-0.7□□□□□ -2.52
RPS28P62857 AC091885.1-201ENST00000506658 268 ntBASIC-0.7□□□□□ -2.52
RPS28P62857 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.7□□□□□ -2.52
RPS28P62857 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.7□□□□□ -2.52
RPS28P62857 MTND1P35-201ENST00000526739 508 ntBASIC-0.7□□□□□ -2.52
RPS28P62857 AL355375.2-201ENST00000574825 175 ntBASIC-0.7□□□□□ -2.52
RPS28P62857 AC020891.4-201ENST00000605745 93 ntBASIC-0.7□□□□□ -2.52
RPS28P62857 AC104010.1-201ENST00000616889 150 ntBASIC-0.7□□□□□ -2.52
RPS28P62857 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.7□□□□□ -2.52
RPS28P62857 MIR4788-201ENST00000639104 80 ntBASIC-0.7□□□□□ -2.52
RPS28P62857 SNORD114-11-201ENST00000363738 75 ntBASIC-0.71□□□□□ -2.52
RPS28P62857 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.71□□□□□ -2.52
RPS28P62857 RNU6-580P-201ENST00000365159 107 ntBASIC-0.71□□□□□ -2.52
RPS28P62857 RNU6-407P-201ENST00000365280 104 ntBASIC-0.71□□□□□ -2.52
RPS28P62857 RNU6-46P-201ENST00000383860 107 ntBASIC-0.71□□□□□ -2.52
RPS28P62857 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.71□□□□□ -2.52
RPS28P62857 RNU6-364P-201ENST00000384387 107 ntBASIC-0.71□□□□□ -2.52
RPS28P62857 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.71□□□□□ -2.52
RPS28P62857 RNU2-54P-201ENST00000410299 190 ntBASIC-0.71□□□□□ -2.52
RPS28P62857 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.71□□□□□ -2.52
RPS28P62857 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.71□□□□□ -2.52
RPS28P62857 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.71□□□□□ -2.52
RPS28P62857 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.71□□□□□ -2.52
RPS28P62857 RNU6-63P-201ENST00000516690 95 ntBASIC-0.71□□□□□ -2.52
RPS28P62857 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.71□□□□□ -2.52
RPS28P62857 MTND4P33-201ENST00000556706 766 ntBASIC-0.71□□□□□ -2.52
RPS28P62857 RN7SL660P-201ENST00000614852 299 ntBASIC-0.71□□□□□ -2.52
RPS28P62857 AC240442.1-201ENST00000616055 283 ntBASIC-0.71□□□□□ -2.52
RPS28P62857 SEPT14P19-203ENST00000633205 211 ntBASIC-0.71□□□□□ -2.52
RPS28P62857 AC121333.1-201ENST00000567488 2709 ntBASIC-0.71□□□□□ -2.52
RPS28P62857 SNORD45.3-201ENST00000363836 72 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.72□□□□□ -2.52
RPS28P62857 AC117470.1-201ENST00000381974 330 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 SNORD73A-201ENST00000386062 65 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 SNORA26-201ENST00000391286 122 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 MIR450B-201ENST00000401182 78 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 MTCO2P33-201ENST00000402100 465 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 MLLT10P1-201ENST00000418346 262 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 AC018865.2-201ENST00000423631 129 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.72□□□□□ -2.52
RPS28P62857 AL603825.1-201ENST00000438481 80 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 RNU6-469P-201ENST00000516253 101 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 SNORA25.14-201ENST00000516481 132 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 RNU6-897P-201ENST00000517135 105 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.72□□□□□ -2.52
RPS28P62857 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.72□□□□□ -2.52
RPS28P62857 MIR4432-201ENST00000581823 84 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 AC005771.1-201ENST00000585581 349 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 AC010525.2-201ENST00000590920 195 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 AL139418.1-201ENST00000613613 177 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 AC022306.3-201ENST00000619930 550 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 AC006504.8-201ENST00000621046 635 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 AC013437.2-201ENST00000639587 677 ntBASIC-0.72□□□□□ -2.52
RPS28P62857 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.73□□□□□ -2.53
RPS28P62857 RNU6-674P-201ENST00000363831 107 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms