Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 Y_RNA.626-201ENST00000411288 95 ntBASIC2.07□□□□□ -2.08
SEC61A1P61619 AC024067.1-201ENST00000426199 223 ntBASIC2.07□□□□□ -2.08
SEC61A1P61619 BTF3P11-201ENST00000426582 477 ntBASIC2.07□□□□□ -2.08
SEC61A1P61619 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.07□□□□□ -2.08
SEC61A1P61619 NDUFB4P10-201ENST00000452541 359 ntBASIC2.07□□□□□ -2.08
SEC61A1P61619 PRELID3BP1-201ENST00000457142 540 ntBASIC2.07□□□□□ -2.08
SEC61A1P61619 Y_RNA.641-201ENST00000459414 105 ntBASIC2.07□□□□□ -2.08
SEC61A1P61619 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.07□□□□□ -2.08
SEC61A1P61619 AC008413.1-201ENST00000511864 177 ntBASIC2.07□□□□□ -2.08
SEC61A1P61619 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.07□□□□□ -2.08
SEC61A1P61619 MIR4298-201ENST00000584380 73 ntBASIC2.07□□□□□ -2.08
SEC61A1P61619 AC011921.3-201ENST00000605540 361 ntBASIC2.07□□□□□ -2.08
SEC61A1P61619 MIR6895-201ENST00000613497 78 ntBASIC2.07□□□□□ -2.08
SEC61A1P61619 U4atac.1-201ENST00000618345 95 ntBASIC2.07□□□□□ -2.08
SEC61A1P61619 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.07□□□□□ -2.08
SEC61A1P61619 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SEC61A1P61619 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
SEC61A1P61619 MIR21-201ENST00000362134 72 ntBASIC2.06□□□□□ -2.08
SEC61A1P61619 SNORA38-201ENST00000363946 132 ntBASIC2.06□□□□□ -2.08
SEC61A1P61619 RNU6-1048P-201ENST00000364054 107 ntBASIC2.06□□□□□ -2.08
SEC61A1P61619 RNY4P28-201ENST00000365281 93 ntBASIC2.06□□□□□ -2.08
SEC61A1P61619 AL355796.1-201ENST00000406706 323 ntBASIC2.06□□□□□ -2.08
SEC61A1P61619 RNU2-64P-201ENST00000411315 191 ntBASIC2.06□□□□□ -2.08
SEC61A1P61619 RNA5SP508-201ENST00000411327 119 ntBASIC2.06□□□□□ -2.08
SEC61A1P61619 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.06□□□□□ -2.08
SEC61A1P61619 PIGPP3-201ENST00000425307 415 ntBASIC2.06□□□□□ -2.08
SEC61A1P61619 SNORA81.3-201ENST00000517283 198 ntBASIC2.06□□□□□ -2.08
SEC61A1P61619 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.06□□□□□ -2.08
SEC61A1P61619 MIR4435-1-201ENST00000582552 80 ntBASIC2.06□□□□□ -2.08
SEC61A1P61619 snoZ196.1-201ENST00000625269 89 ntBASIC2.06□□□□□ -2.08
SEC61A1P61619 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SEC61A1P61619 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SEC61A1P61619 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
SEC61A1P61619 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.05□□□□□ -2.08
SEC61A1P61619 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
SEC61A1P61619 AC134026.1-201ENST00000623249 2239 ntBASIC2.05□□□□□ -2.08
SEC61A1P61619 MIR411-201ENST00000362239 96 ntBASIC2.05□□□□□ -2.08
SEC61A1P61619 Y_RNA.172-201ENST00000363765 102 ntBASIC2.05□□□□□ -2.08
SEC61A1P61619 RNU6-923P-201ENST00000364753 107 ntBASIC2.05□□□□□ -2.08
SEC61A1P61619 RNU6-211P-201ENST00000384047 107 ntBASIC2.05□□□□□ -2.08
SEC61A1P61619 MIR1262-201ENST00000408276 93 ntBASIC2.05□□□□□ -2.08
SEC61A1P61619 AC016925.1-201ENST00000458303 298 ntBASIC2.05□□□□□ -2.08
SEC61A1P61619 U8.19-201ENST00000459095 133 ntBASIC2.05□□□□□ -2.08
SEC61A1P61619 Y_RNA.638-201ENST00000459374 113 ntBASIC2.05□□□□□ -2.08
SEC61A1P61619 AC114982.1-201ENST00000469402 321 ntBASIC2.05□□□□□ -2.08
SEC61A1P61619 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.05□□□□□ -2.08
SEC61A1P61619 AC022559.1-201ENST00000520905 205 ntBASIC2.05□□□□□ -2.08
SEC61A1P61619 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.05□□□□□ -2.08
SEC61A1P61619 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.05□□□□□ -2.08
SEC61A1P61619 AL008718.3-201ENST00000610217 321 ntBASIC2.05□□□□□ -2.08
SEC61A1P61619 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.05□□□□□ -2.08
SEC61A1P61619 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
SEC61A1P61619 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
SEC61A1P61619 RNU6-1272P-201ENST00000362776 107 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 Y_RNA.82-201ENST00000363000 102 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 Y_RNA.92-201ENST00000363043 102 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 SNORD115-3-201ENST00000363100 82 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 Y_RNA.150-201ENST00000363562 102 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 RNU6-801P-201ENST00000364087 105 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 Y_RNA.235-201ENST00000364412 102 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 Y_RNA.306-201ENST00000365015 102 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 Y_RNA.312-201ENST00000365089 102 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 Y_RNA.322-201ENST00000365151 102 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SEC61A1P61619 RNU6-47P-201ENST00000383866 107 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 SNORA20B-201ENST00000384220 132 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 RNU6-763P-201ENST00000390865 106 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 SNORA26.5-201ENST00000391215 123 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 AL357139.1-201ENST00000407792 426 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 RNU6-855P-201ENST00000410395 104 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 AC009310.1-201ENST00000414414 451 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 Z82209.1-201ENST00000422141 2135 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 Y_RNA.650-201ENST00000459002 102 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 Y_RNA.644-201ENST00000459006 113 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 AC010531.2-201ENST00000465012 153 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.04□□□□□ -2.08
SEC61A1P61619 RN7SL429P-201ENST00000479090 223 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 RN7SL489P-201ENST00000486185 223 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 RN7SL327P-201ENST00000488659 223 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 AC093259.1-201ENST00000509755 300 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 Y_RNA.674-201ENST00000516362 113 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 Y_RNA.777-201ENST00000516982 102 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 CYCSP26-201ENST00000534107 320 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 AC121758.2-201ENST00000553271 193 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 AC091544.4-201ENST00000555268 342 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 MIR4282-201ENST00000583613 67 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 Y_RNA.771-201ENST00000598668 102 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 AC067747.1-201ENST00000608026 250 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 AC004792.1-201ENST00000614523 137 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 RN7SL853P-201ENST00000617250 223 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 Y_RNA.789-201ENST00000622480 102 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 CTSLP2-204ENST00000629029 392 ntBASIC2.04□□□□□ -2.08
SEC61A1P61619 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.04□□□□□ -2.08
SEC61A1P61619 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SEC61A1P61619 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SEC61A1P61619 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SEC61A1P61619 AC016717.2-201ENST00000609089 5141 ntBASIC2.03□□□□□ -2.08
SEC61A1P61619 Y_RNA.29-201ENST00000362570 113 ntBASIC2.03□□□□□ -2.08
SEC61A1P61619 SNORA3A-201ENST00000364113 130 ntBASIC2.03□□□□□ -2.08
SEC61A1P61619 Y_RNA.308-201ENST00000365043 101 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms