Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 Y_RNA.524-201ENST00000384564 100 ntBASIC0.72□□□□□ -2.29
EIF3EP60228 Y_RNA.561-201ENST00000384694 100 ntBASIC0.72□□□□□ -2.29
EIF3EP60228 MIR562-201ENST00000384894 95 ntBASIC0.72□□□□□ -2.29
EIF3EP60228 RNU6-332P-201ENST00000391193 108 ntBASIC0.72□□□□□ -2.29
EIF3EP60228 MIR942-201ENST00000401111 86 ntBASIC0.72□□□□□ -2.29
EIF3EP60228 MTND3P23-201ENST00000431980 347 ntBASIC0.72□□□□□ -2.29
EIF3EP60228 MTND5P15-201ENST00000434246 349 ntBASIC0.72□□□□□ -2.29
EIF3EP60228 MTCO2P7-201ENST00000446518 666 ntBASIC0.72□□□□□ -2.29
EIF3EP60228 AC117454.1-201ENST00000491120 168 ntBASIC0.72□□□□□ -2.29
EIF3EP60228 RNU6-1114P-201ENST00000516022 107 ntBASIC0.72□□□□□ -2.29
EIF3EP60228 AC026407.1-201ENST00000518369 204 ntBASIC0.72□□□□□ -2.29
EIF3EP60228 AP002001.1-203ENST00000534002 267 ntBASIC0.72□□□□□ -2.29
EIF3EP60228 7SK.7-201ENST00000603504 247 ntBASIC0.72□□□□□ -2.29
EIF3EP60228 ZNF299P-201ENST00000406845 1804 ntBASIC0.71□□□□□ -2.3
EIF3EP60228 SNORA1B-201ENST00000362535 133 ntBASIC0.71□□□□□ -2.3
EIF3EP60228 SNORD116-1-201ENST00000384335 95 ntBASIC0.71□□□□□ -2.3
EIF3EP60228 Y_RNA.490-201ENST00000384413 102 ntBASIC0.71□□□□□ -2.3
EIF3EP60228 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
EIF3EP60228 RNU2-16P-201ENST00000410712 136 ntBASIC0.71□□□□□ -2.3
EIF3EP60228 MTATP6P17-201ENST00000431030 672 ntBASIC0.71□□□□□ -2.3
EIF3EP60228 RPL39P39-201ENST00000455840 151 ntBASIC0.71□□□□□ -2.3
EIF3EP60228 RNU7-21P-201ENST00000459430 62 ntBASIC0.71□□□□□ -2.3
EIF3EP60228 AC046134.1-201ENST00000514454 666 ntBASIC0.71□□□□□ -2.3
EIF3EP60228 AL117336.2-201ENST00000602435 335 ntBASIC0.71□□□□□ -2.3
EIF3EP60228 PRELID3BP2-201ENST00000605362 201 ntBASIC0.71□□□□□ -2.3
EIF3EP60228 AC004832.4-201ENST00000608952 331 ntBASIC0.71□□□□□ -2.3
EIF3EP60228 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
EIF3EP60228 RNU6-306P-201ENST00000384617 107 ntBASIC0.7□□□□□ -2.3
EIF3EP60228 AC018710.1-201ENST00000506509 158 ntBASIC0.7□□□□□ -2.3
EIF3EP60228 RNU6-107P-201ENST00000516643 102 ntBASIC0.7□□□□□ -2.3
EIF3EP60228 RNU2-56P-201ENST00000516826 190 ntBASIC0.7□□□□□ -2.3
EIF3EP60228 AP002004.2-201ENST00000531656 154 ntBASIC0.7□□□□□ -2.3
EIF3EP60228 RPL21P9-201ENST00000556149 474 ntBASIC0.7□□□□□ -2.3
EIF3EP60228 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.7□□□□□ -2.3
EIF3EP60228 MIR3942-201ENST00000585264 109 ntBASIC0.7□□□□□ -2.3
EIF3EP60228 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.7□□□□□ -2.3
EIF3EP60228 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
EIF3EP60228 SNORA27.1-201ENST00000362604 124 ntBASIC0.69□□□□□ -2.3
EIF3EP60228 SNORA75.2-201ENST00000391138 150 ntBASIC0.69□□□□□ -2.3
EIF3EP60228 SNORA75.3-201ENST00000391231 150 ntBASIC0.69□□□□□ -2.3
EIF3EP60228 RNA5SP482-201ENST00000391269 118 ntBASIC0.69□□□□□ -2.3
EIF3EP60228 RNU5A-5P-201ENST00000411054 116 ntBASIC0.69□□□□□ -2.3
EIF3EP60228 ELOCP21-201ENST00000412558 336 ntBASIC0.69□□□□□ -2.3
EIF3EP60228 AC018865.2-201ENST00000423631 129 ntBASIC0.69□□□□□ -2.3
EIF3EP60228 USMG5P1-201ENST00000425964 177 ntBASIC0.69□□□□□ -2.3
EIF3EP60228 MTND1P1-201ENST00000445453 368 ntBASIC0.69□□□□□ -2.3
EIF3EP60228 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.69□□□□□ -2.3
EIF3EP60228 MTND1P29-201ENST00000448112 647 ntBASIC0.69□□□□□ -2.3
EIF3EP60228 snoU13.25-201ENST00000458945 104 ntBASIC0.69□□□□□ -2.3
EIF3EP60228 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.69□□□□□ -2.3
EIF3EP60228 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.69□□□□□ -2.3
EIF3EP60228 RNA5SP20-201ENST00000515976 84 ntBASIC0.69□□□□□ -2.3
EIF3EP60228 RNU7-12P-201ENST00000516030 62 ntBASIC0.69□□□□□ -2.3
EIF3EP60228 DEFB108E-201ENST00000524692 240 ntBASIC0.69□□□□□ -2.3
EIF3EP60228 MIR3684-201ENST00000579779 74 ntBASIC0.69□□□□□ -2.3
EIF3EP60228 BNIP3P10-201ENST00000605360 577 ntBASIC0.69□□□□□ -2.3
EIF3EP60228 RNU6-222P-201ENST00000362438 107 ntBASIC0.68□□□□□ -2.3
EIF3EP60228 Y_RNA.267-201ENST00000364679 109 ntBASIC0.68□□□□□ -2.3
EIF3EP60228 RNU1-93P-201ENST00000364704 169 ntBASIC0.68□□□□□ -2.3
EIF3EP60228 RNU6-1264P-201ENST00000383891 107 ntBASIC0.68□□□□□ -2.3
EIF3EP60228 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.68□□□□□ -2.3
EIF3EP60228 USP9YP16-201ENST00000430287 407 ntBASIC0.68□□□□□ -2.3
EIF3EP60228 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.68□□□□□ -2.3
EIF3EP60228 USP9YP23-201ENST00000455085 407 ntBASIC0.68□□□□□ -2.3
EIF3EP60228 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.68□□□□□ -2.3
EIF3EP60228 AC011604.1-201ENST00000545978 196 ntBASIC0.68□□□□□ -2.3
EIF3EP60228 AC093023.1-201ENST00000547375 507 ntBASIC0.68□□□□□ -2.3
EIF3EP60228 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.68□□□□□ -2.3
EIF3EP60228 MIR4273-201ENST00000582824 84 ntBASIC0.68□□□□□ -2.3
EIF3EP60228 AC125232.2-201ENST00000592457 143 ntBASIC0.68□□□□□ -2.3
EIF3EP60228 AL096861.1-201ENST00000610899 123 ntBASIC0.68□□□□□ -2.3
EIF3EP60228 AL391903.3-201ENST00000612158 163 ntBASIC0.68□□□□□ -2.3
EIF3EP60228 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.68□□□□□ -2.3
EIF3EP60228 AC024614.3-201ENST00000637860 256 ntBASIC0.68□□□□□ -2.3
EIF3EP60228 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
EIF3EP60228 RNU6-110P-201ENST00000384508 104 ntBASIC0.67□□□□□ -2.3
EIF3EP60228 MIR526A1-201ENST00000384897 85 ntBASIC0.67□□□□□ -2.3
EIF3EP60228 MIR329-1-201ENST00000385028 80 ntBASIC0.67□□□□□ -2.3
EIF3EP60228 MTCYBP4-201ENST00000401524 249 ntBASIC0.67□□□□□ -2.3
EIF3EP60228 RNU6-1001P-201ENST00000411265 100 ntBASIC0.67□□□□□ -2.3
EIF3EP60228 AC104332.1-201ENST00000440471 797 ntBASIC0.67□□□□□ -2.3
EIF3EP60228 AL137792.2-201ENST00000443484 235 ntBASIC0.67□□□□□ -2.3
EIF3EP60228 AC245047.8-201ENST00000456455 284 ntBASIC0.67□□□□□ -2.3
EIF3EP60228 RNA5SP255-201ENST00000516370 107 ntBASIC0.67□□□□□ -2.3
EIF3EP60228 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.66□□□□□ -2.3
EIF3EP60228 Y_RNA.106-201ENST00000363189 100 ntBASIC0.66□□□□□ -2.3
EIF3EP60228 RNU6-1059P-201ENST00000363752 98 ntBASIC0.66□□□□□ -2.3
EIF3EP60228 RNU6-407P-201ENST00000365280 104 ntBASIC0.66□□□□□ -2.3
EIF3EP60228 RNU6-117P-201ENST00000365415 107 ntBASIC0.66□□□□□ -2.3
EIF3EP60228 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.66□□□□□ -2.3
EIF3EP60228 SNORD116-13-201ENST00000384408 92 ntBASIC0.66□□□□□ -2.3
EIF3EP60228 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
EIF3EP60228 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.66□□□□□ -2.3
EIF3EP60228 EIF1P2-201ENST00000428233 350 ntBASIC0.66□□□□□ -2.3
EIF3EP60228 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.66□□□□□ -2.3
EIF3EP60228 Z98949.2-201ENST00000440996 144 ntBASIC0.66□□□□□ -2.3
EIF3EP60228 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.66□□□□□ -2.3
EIF3EP60228 AC098826.2-201ENST00000452011 651 ntBASIC0.66□□□□□ -2.3
EIF3EP60228 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.66□□□□□ -2.3
EIF3EP60228 LINC01399-202ENST00000458450 244 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms