Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RNU6-1301P-201ENST00000362724 104 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 RNU6-450P-201ENST00000364654 107 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 Y_RNA.527-201ENST00000384573 102 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 MIR329-1-201ENST00000385028 80 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 MIR625-201ENST00000385047 85 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 SNORA69.1-201ENST00000390904 137 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 RNU1-139P-201ENST00000391307 165 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 MRPL42P3-201ENST00000401492 326 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 Y_RNA.605-201ENST00000410577 105 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 RNA5SP504-201ENST00000410676 117 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 RNU6-1001P-201ENST00000411265 100 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.53□□□□□ -2.16
RIPK4P57078 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
RIPK4P57078 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 AC099799.1-201ENST00000439809 192 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.53□□□□□ -2.16
RIPK4P57078 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.53□□□□□ -2.16
RIPK4P57078 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.53□□□□□ -2.16
RIPK4P57078 AC022868.1-201ENST00000517767 391 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
RIPK4P57078 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.53□□□□□ -2.16
RIPK4P57078 AK6P2-201ENST00000549020 471 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 AC006600.1-201ENST00000572529 153 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.53□□□□□ -2.16
RIPK4P57078 MIR5695-201ENST00000579717 85 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 MIR4680-201ENST00000580906 66 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 Y_RNA.812-201ENST00000610788 101 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 Y_RNA.784-201ENST00000613803 101 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 Y_RNA.787-201ENST00000616522 101 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 AL590240.4-201ENST00000616908 390 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 Y_RNA.780-201ENST00000617336 101 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 U2.1-201ENST00000618978 145 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 Y_RNA.801-201ENST00000619005 101 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 AC137590.2-201ENST00000619709 240 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 AC130454.1-201ENST00000622948 401 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 AC022513.1-201ENST00000624512 117 ntBASIC1.53□□□□□ -2.16
RIPK4P57078 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RIPK4P57078 Y_RNA.202-201ENST00000364083 110 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 SNORD31B-201ENST00000364977 69 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 RNU6-1145P-201ENST00000384246 107 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 SNORA67.2-201ENST00000384300 149 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 RNA5SP100-201ENST00000410903 110 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 RNA5SP59-201ENST00000410922 110 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 AC114482.1-201ENST00000418010 247 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 AC004386.2-201ENST00000441858 148 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 AC112492.4-201ENST00000456549 352 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 AC016925.1-201ENST00000458303 298 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 RNA5SP57-201ENST00000459463 123 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 HMGN1P7-201ENST00000491722 313 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 SNORA25.10-201ENST00000515926 124 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 SNORA25.14-201ENST00000516481 132 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 AC090517.1-201ENST00000569307 266 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 AL021879.1-201ENST00000611756 288 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 AC011476.5-201ENST00000615594 130 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.52□□□□□ -2.17
RIPK4P57078 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.52□□□□□ -2.17
RIPK4P57078 AC005592.1-201ENST00000566527 1640 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 RNU6-545P-201ENST00000362681 104 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 RNY1P10-201ENST00000363268 113 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 RNU6-541P-201ENST00000384709 110 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 MIR606-201ENST00000384851 96 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 RNU6-823P-201ENST00000391042 103 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 RNU6-130P-201ENST00000411112 103 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 USP9YP16-201ENST00000430287 407 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.51□□□□□ -2.17
RIPK4P57078 AL118496.2-201ENST00000448300 230 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 USP9YP23-201ENST00000455085 407 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 U8.20-201ENST00000459445 131 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.51□□□□□ -2.17
RIPK4P57078 AC091179.3-201ENST00000474761 144 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 RNU6-1114P-201ENST00000516022 107 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 RNVU1-2-201ENST00000516326 135 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 RNU6-988P-201ENST00000519081 107 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 AC144568.1-201ENST00000520139 137 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.51□□□□□ -2.17
RIPK4P57078 AC093023.1-201ENST00000547375 507 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 SUB1P4-201ENST00000566062 339 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 7SK.7-201ENST00000603504 247 ntBASIC1.51□□□□□ -2.17
RIPK4P57078 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
RIPK4P57078 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.5□□□□□ -2.17
RIPK4P57078 RNU6-727P-201ENST00000363592 107 ntBASIC1.5□□□□□ -2.17
RIPK4P57078 Y_RNA.158-201ENST00000363651 101 ntBASIC1.5□□□□□ -2.17
RIPK4P57078 RNU6-879P-201ENST00000364328 108 ntBASIC1.5□□□□□ -2.17
RIPK4P57078 RNU6-738P-201ENST00000384531 106 ntBASIC1.5□□□□□ -2.17
RIPK4P57078 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
RIPK4P57078 AL590004.1-201ENST00000405321 300 ntBASIC1.5□□□□□ -2.17
RIPK4P57078 MTCO1P44-201ENST00000441935 243 ntBASIC1.5□□□□□ -2.17
RIPK4P57078 RNA5SP54-201ENST00000516951 92 ntBASIC1.5□□□□□ -2.17
RIPK4P57078 RNU7-4P-201ENST00000516961 62 ntBASIC1.5□□□□□ -2.17
RIPK4P57078 RRN3P3-201ENST00000549207 578 ntBASIC1.5□□□□□ -2.17
RIPK4P57078 AL442163.3-201ENST00000554110 156 ntBASIC1.5□□□□□ -2.17
RIPK4P57078 VN1R91P-201ENST00000594377 169 ntBASIC1.5□□□□□ -2.17
RIPK4P57078 AL360085.1-201ENST00000604713 532 ntBASIC1.5□□□□□ -2.17
RIPK4P57078 PART1_1.1-201ENST00000611761 217 ntBASIC1.5□□□□□ -2.17
RIPK4P57078 Y_RNA.26-201ENST00000362539 101 ntBASIC1.49□□□□□ -2.17
RIPK4P57078 Y_RNA.39-201ENST00000362620 98 ntBASIC1.49□□□□□ -2.17
RIPK4P57078 RNU1-22P-201ENST00000363334 158 ntBASIC1.49□□□□□ -2.17
RIPK4P57078 SNORA63-201ENST00000363450 132 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms