Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 Y_RNA.151-201ENST00000363566 112 ntBASIC0.39□□□□□ -2.35
CLDN8P56748 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.39□□□□□ -2.35
CLDN8P56748 snoU13.25-201ENST00000458945 104 ntBASIC0.39□□□□□ -2.35
CLDN8P56748 AC018710.1-201ENST00000506509 158 ntBASIC0.39□□□□□ -2.35
CLDN8P56748 RNU7-175P-201ENST00000515915 61 ntBASIC0.39□□□□□ -2.35
CLDN8P56748 RN7SKP12-201ENST00000516275 143 ntBASIC0.39□□□□□ -2.35
CLDN8P56748 AC120024.3-201ENST00000603167 156 ntBASIC0.39□□□□□ -2.35
CLDN8P56748 AC073114.1-201ENST00000612027 490 ntBASIC0.39□□□□□ -2.35
CLDN8P56748 AC099654.12-201ENST00000639868 649 ntBASIC0.39□□□□□ -2.35
CLDN8P56748 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
CLDN8P56748 RNA5SP347-201ENST00000362445 119 ntBASIC0.38□□□□□ -2.35
CLDN8P56748 MIR514A2-201ENST00000385131 88 ntBASIC0.38□□□□□ -2.35
CLDN8P56748 MIR514A3-201ENST00000385132 88 ntBASIC0.38□□□□□ -2.35
CLDN8P56748 MTCYBP10-201ENST00000424905 650 ntBASIC0.38□□□□□ -2.35
CLDN8P56748 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.38□□□□□ -2.35
CLDN8P56748 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.38□□□□□ -2.35
CLDN8P56748 RPL30P10-201ENST00000488148 337 ntBASIC0.38□□□□□ -2.35
CLDN8P56748 MTATP6P24-201ENST00000576835 677 ntBASIC0.38□□□□□ -2.35
CLDN8P56748 AC073544.1-201ENST00000600110 1595 ntBASIC0.37□□□□□ -2.35
CLDN8P56748 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.37□□□□□ -2.35
CLDN8P56748 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
CLDN8P56748 SNORA27.1-201ENST00000362604 124 ntBASIC0.37□□□□□ -2.35
CLDN8P56748 Y_RNA.167-201ENST00000363735 109 ntBASIC0.37□□□□□ -2.35
CLDN8P56748 RNA5SP48-201ENST00000363969 126 ntBASIC0.37□□□□□ -2.35
CLDN8P56748 Y_RNA.231-201ENST00000364358 102 ntBASIC0.37□□□□□ -2.35
CLDN8P56748 MIR15B-201ENST00000385045 98 ntBASIC0.37□□□□□ -2.35
CLDN8P56748 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.37□□□□□ -2.35
CLDN8P56748 RPS20P10-201ENST00000451209 253 ntBASIC0.37□□□□□ -2.35
CLDN8P56748 RNU6-956P-201ENST00000458868 103 ntBASIC0.37□□□□□ -2.35
CLDN8P56748 RNU4-57P-201ENST00000515980 135 ntBASIC0.37□□□□□ -2.35
CLDN8P56748 RNU6-229P-201ENST00000516614 102 ntBASIC0.37□□□□□ -2.35
CLDN8P56748 AC011195.1-201ENST00000578177 177 ntBASIC0.37□□□□□ -2.35
CLDN8P56748 MIR6516-201ENST00000630554 81 ntBASIC0.37□□□□□ -2.35
CLDN8P56748 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
CLDN8P56748 RNU6-254P-201ENST00000363377 107 ntBASIC0.36□□□□□ -2.35
CLDN8P56748 RNU4-41P-201ENST00000364426 143 ntBASIC0.36□□□□□ -2.35
CLDN8P56748 RNU6-1264P-201ENST00000383891 107 ntBASIC0.36□□□□□ -2.35
CLDN8P56748 SNORA36.2-201ENST00000384004 127 ntBASIC0.36□□□□□ -2.35
CLDN8P56748 MIR548J-201ENST00000408833 112 ntBASIC0.36□□□□□ -2.35
CLDN8P56748 RNA5SP222-201ENST00000411039 105 ntBASIC0.36□□□□□ -2.35
CLDN8P56748 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.36□□□□□ -2.35
CLDN8P56748 AC098934.3-201ENST00000430450 190 ntBASIC0.36□□□□□ -2.35
CLDN8P56748 NDUFA5P4-201ENST00000436704 385 ntBASIC0.36□□□□□ -2.35
CLDN8P56748 AC046134.1-201ENST00000514454 666 ntBASIC0.36□□□□□ -2.35
CLDN8P56748 LRRC34P1-201ENST00000542742 915 ntBASIC0.36□□□□□ -2.35
CLDN8P56748 AL442644.1-201ENST00000454390 3105 ntBASIC0.35□□□□□ -2.35
CLDN8P56748 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CLDN8P56748 MIR517A-201ENST00000385001 87 ntBASIC0.35□□□□□ -2.35
CLDN8P56748 MIR520C-201ENST00000385005 87 ntBASIC0.35□□□□□ -2.35
CLDN8P56748 SNORD111-201ENST00000408139 94 ntBASIC0.35□□□□□ -2.35
CLDN8P56748 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.35□□□□□ -2.35
CLDN8P56748 RNU5A-5P-201ENST00000411054 116 ntBASIC0.35□□□□□ -2.35
CLDN8P56748 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.35□□□□□ -2.35
CLDN8P56748 USMG5P1-201ENST00000425964 177 ntBASIC0.35□□□□□ -2.35
CLDN8P56748 HMGN2P26-201ENST00000463169 339 ntBASIC0.35□□□□□ -2.35
CLDN8P56748 AC083904.1-201ENST00000487828 231 ntBASIC0.35□□□□□ -2.35
CLDN8P56748 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.35□□□□□ -2.35
CLDN8P56748 AP003716.2-201ENST00000528260 108 ntBASIC0.35□□□□□ -2.35
CLDN8P56748 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.35□□□□□ -2.35
CLDN8P56748 MIR6788-201ENST00000618842 66 ntBASIC0.35□□□□□ -2.35
CLDN8P56748 AC127459.3-201ENST00000624328 466 ntBASIC0.35□□□□□ -2.35
CLDN8P56748 SNORD18A-201ENST00000363753 72 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 Y_RNA.191-201ENST00000363972 113 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.34□□□□□ -2.36
CLDN8P56748 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 RNU6-1105P-201ENST00000384774 107 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 AC244098.3-201ENST00000424803 96 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 AC244023.1-201ENST00000426884 112 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 ERLEC1P1-201ENST00000433806 578 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 Z98949.2-201ENST00000440996 144 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 AL137792.2-201ENST00000443484 235 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 SUMO1P2-201ENST00000452524 304 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 RNU11-2P-201ENST00000516898 142 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 RNU6-1096P-201ENST00000517089 102 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 RNU6-1116P-201ENST00000517269 99 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 AC242498.1-201ENST00000604134 111 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 AC019193.3-201ENST00000609144 554 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 MIR8070-201ENST00000616510 88 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 AC243994.1-201ENST00000618627 109 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 AL008636.1-201ENST00000625038 1018 ntBASIC0.34□□□□□ -2.36
CLDN8P56748 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
CLDN8P56748 SNORD14.1-201ENST00000365609 90 ntBASIC0.33□□□□□ -2.36
CLDN8P56748 RNU6-1297P-201ENST00000384415 104 ntBASIC0.33□□□□□ -2.36
CLDN8P56748 RNU6-95P-201ENST00000384697 107 ntBASIC0.33□□□□□ -2.36
CLDN8P56748 MIR1185-1-201ENST00000408598 86 ntBASIC0.33□□□□□ -2.36
CLDN8P56748 PCNPP5-201ENST00000452246 481 ntBASIC0.33□□□□□ -2.36
CLDN8P56748 RNU6-1114P-201ENST00000516022 107 ntBASIC0.33□□□□□ -2.36
CLDN8P56748 MIR5000-201ENST00000577717 103 ntBASIC0.33□□□□□ -2.36
CLDN8P56748 MIR4452-201ENST00000583004 71 ntBASIC0.33□□□□□ -2.36
CLDN8P56748 AC124303.1-201ENST00000605703 360 ntBASIC0.33□□□□□ -2.36
CLDN8P56748 RNU6-94P-201ENST00000607728 107 ntBASIC0.33□□□□□ -2.36
CLDN8P56748 AC092954.2-201ENST00000609103 430 ntBASIC0.33□□□□□ -2.36
CLDN8P56748 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.33□□□□□ -2.36
CLDN8P56748 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
CLDN8P56748 RNA5SP432-201ENST00000362480 116 ntBASIC0.32□□□□□ -2.36
CLDN8P56748 SNORA25.3-201ENST00000363205 127 ntBASIC0.32□□□□□ -2.36
CLDN8P56748 SNORD68-201ENST00000363214 84 ntBASIC0.32□□□□□ -2.36
CLDN8P56748 RNU6-522P-201ENST00000364497 107 ntBASIC0.32□□□□□ -2.36
CLDN8P56748 SNORA75-201ENST00000384158 137 ntBASIC0.32□□□□□ -2.36
CLDN8P56748 SNORD105-201ENST00000386910 85 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms