Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 AC091178.2-201ENST00000584401 117 ntBASIC0.87□□□□□ -2.27
ATP1B3P54709 AC125232.2-201ENST00000592457 143 ntBASIC0.87□□□□□ -2.27
ATP1B3P54709 MIR3662-201ENST00000637030 95 ntBASIC0.87□□□□□ -2.27
ATP1B3P54709 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
ATP1B3P54709 SNORA27.1-201ENST00000362604 124 ntBASIC0.86□□□□□ -2.27
ATP1B3P54709 RNU6-842P-201ENST00000384269 107 ntBASIC0.86□□□□□ -2.27
ATP1B3P54709 MIR329-1-201ENST00000385028 80 ntBASIC0.86□□□□□ -2.27
ATP1B3P54709 RNA5SP482-201ENST00000391269 118 ntBASIC0.86□□□□□ -2.27
ATP1B3P54709 AL139396.1-201ENST00000421137 167 ntBASIC0.86□□□□□ -2.27
ATP1B3P54709 AC018865.2-201ENST00000423631 129 ntBASIC0.86□□□□□ -2.27
ATP1B3P54709 EIF1P2-201ENST00000428233 350 ntBASIC0.86□□□□□ -2.27
ATP1B3P54709 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.86□□□□□ -2.27
ATP1B3P54709 UQCRBP2-201ENST00000447827 297 ntBASIC0.86□□□□□ -2.27
ATP1B3P54709 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.86□□□□□ -2.27
ATP1B3P54709 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.86□□□□□ -2.27
ATP1B3P54709 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.86□□□□□ -2.27
ATP1B3P54709 MIR5701-3-201ENST00000578890 82 ntBASIC0.86□□□□□ -2.27
ATP1B3P54709 MIR5701-1-201ENST00000585138 82 ntBASIC0.86□□□□□ -2.27
ATP1B3P54709 AC080078.2-201ENST00000603766 501 ntBASIC0.86□□□□□ -2.27
ATP1B3P54709 AC016727.1-205ENST00000605437 569 ntBASIC0.86□□□□□ -2.27
ATP1B3P54709 AL020996.3-201ENST00000606617 222 ntBASIC0.86□□□□□ -2.27
ATP1B3P54709 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.86□□□□□ -2.27
ATP1B3P54709 MIR5701-2-201ENST00000615634 82 ntBASIC0.86□□□□□ -2.27
ATP1B3P54709 MTND5P16-201ENST00000460269 1703 ntBASIC0.86□□□□□ -2.27
ATP1B3P54709 MIR410-201ENST00000362222 80 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 Y_RNA.48-201ENST00000362710 103 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 Y_RNA.89-201ENST00000363031 102 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 RNU6-392P-201ENST00000364926 101 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 Y_RNA.436-201ENST00000384097 102 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 Y_RNA.450-201ENST00000384198 113 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 Y_RNA.573-201ENST00000384763 105 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 ELOCP21-201ENST00000412558 336 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 RPL39P39-201ENST00000455840 151 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 Y_RNA.638-201ENST00000459374 113 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 AC074133.1-201ENST00000515696 183 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 RNA5SP20-201ENST00000515976 84 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 CBX3P8-201ENST00000532412 525 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.85□□□□□ -2.27
ATP1B3P54709 AC136932.1-201ENST00000574771 208 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 AC073544.1-201ENST00000600110 1595 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 AC080013.6-201ENST00000606185 215 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.85□□□□□ -2.27
ATP1B3P54709 MIR6128-201ENST00000615528 109 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 AC100810.6-201ENST00000638068 285 ntBASIC0.85□□□□□ -2.27
ATP1B3P54709 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
ATP1B3P54709 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
ATP1B3P54709 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
ATP1B3P54709 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.84□□□□□ -2.27
ATP1B3P54709 SNORA1B-201ENST00000362535 133 ntBASIC0.84□□□□□ -2.27
ATP1B3P54709 RNU4-38P-201ENST00000364472 129 ntBASIC0.84□□□□□ -2.27
ATP1B3P54709 SNORD114-24-201ENST00000365029 72 ntBASIC0.84□□□□□ -2.27
ATP1B3P54709 RNU6-407P-201ENST00000365280 104 ntBASIC0.84□□□□□ -2.27
ATP1B3P54709 Y_RNA.473-201ENST00000384333 102 ntBASIC0.84□□□□□ -2.27
ATP1B3P54709 SNORA80D-201ENST00000384488 135 ntBASIC0.84□□□□□ -2.27
ATP1B3P54709 RNU6-376P-201ENST00000384731 106 ntBASIC0.84□□□□□ -2.27
ATP1B3P54709 MIR190B-201ENST00000401119 79 ntBASIC0.84□□□□□ -2.27
ATP1B3P54709 RNU6-321P-201ENST00000410912 106 ntBASIC0.84□□□□□ -2.27
ATP1B3P54709 AC002429.1-201ENST00000437672 148 ntBASIC0.84□□□□□ -2.27
ATP1B3P54709 SUMO1P2-201ENST00000452524 304 ntBASIC0.84□□□□□ -2.27
ATP1B3P54709 RNU6-1278P-201ENST00000516130 107 ntBASIC0.84□□□□□ -2.27
ATP1B3P54709 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.84□□□□□ -2.27
ATP1B3P54709 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.84□□□□□ -2.27
ATP1B3P54709 AC091895.1-201ENST00000624494 256 ntBASIC0.84□□□□□ -2.27
ATP1B3P54709 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.84□□□□□ -2.27
ATP1B3P54709 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.84□□□□□ -2.27
ATP1B3P54709 Y_RNA.267-201ENST00000364679 109 ntBASIC0.83□□□□□ -2.28
ATP1B3P54709 RNU1-36P-201ENST00000365130 165 ntBASIC0.83□□□□□ -2.28
ATP1B3P54709 RNU6-53P-201ENST00000365367 106 ntBASIC0.83□□□□□ -2.28
ATP1B3P54709 Y_RNA.363-201ENST00000365529 113 ntBASIC0.83□□□□□ -2.28
ATP1B3P54709 Y_RNA.364-201ENST00000365532 101 ntBASIC0.83□□□□□ -2.28
ATP1B3P54709 RNU6-1145P-201ENST00000384246 107 ntBASIC0.83□□□□□ -2.28
ATP1B3P54709 MIR200A-201ENST00000384875 90 ntBASIC0.83□□□□□ -2.28
ATP1B3P54709 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
ATP1B3P54709 RNU5A-5P-201ENST00000411054 116 ntBASIC0.83□□□□□ -2.28
ATP1B3P54709 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.83□□□□□ -2.28
ATP1B3P54709 AL137792.2-201ENST00000443484 235 ntBASIC0.83□□□□□ -2.28
ATP1B3P54709 AC005840.1-201ENST00000498412 377 ntBASIC0.83□□□□□ -2.28
ATP1B3P54709 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.83□□□□□ -2.28
ATP1B3P54709 TRMT112P2-201ENST00000512910 132 ntBASIC0.83□□□□□ -2.28
ATP1B3P54709 RNU6-1053P-201ENST00000515930 101 ntBASIC0.83□□□□□ -2.28
ATP1B3P54709 RNU7-12P-201ENST00000516030 62 ntBASIC0.83□□□□□ -2.28
ATP1B3P54709 AL358944.1-201ENST00000528537 144 ntBASIC0.83□□□□□ -2.28
ATP1B3P54709 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.83□□□□□ -2.28
ATP1B3P54709 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.83□□□□□ -2.28
ATP1B3P54709 EIF1P4-201ENST00000572664 335 ntBASIC0.83□□□□□ -2.28
ATP1B3P54709 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.83□□□□□ -2.28
ATP1B3P54709 AC104260.1-201ENST00000616660 539 ntBASIC0.83□□□□□ -2.28
ATP1B3P54709 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
ATP1B3P54709 MIRLET7C-201ENST00000362160 84 ntBASIC0.82□□□□□ -2.28
ATP1B3P54709 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
ATP1B3P54709 Y_RNA.301-201ENST00000364990 103 ntBASIC0.82□□□□□ -2.28
ATP1B3P54709 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
ATP1B3P54709 MIR520G-201ENST00000385064 90 ntBASIC0.82□□□□□ -2.28
ATP1B3P54709 MIR873-201ENST00000401120 77 ntBASIC0.82□□□□□ -2.28
ATP1B3P54709 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.82□□□□□ -2.28
ATP1B3P54709 UBE2V1P7-201ENST00000446395 340 ntBASIC0.82□□□□□ -2.28
ATP1B3P54709 AC093850.1-201ENST00000454121 251 ntBASIC0.82□□□□□ -2.28
ATP1B3P54709 RPS29P25-201ENST00000481709 171 ntBASIC0.82□□□□□ -2.28
ATP1B3P54709 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms