Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RNU6-1123P-201ENST00000362347 106 ntBASIC1.33□□□□□ -2.2
GPC3P51654 Y_RNA.48-201ENST00000362710 103 ntBASIC1.33□□□□□ -2.2
GPC3P51654 RNU1-22P-201ENST00000363334 158 ntBASIC1.33□□□□□ -2.2
GPC3P51654 Y_RNA.415-201ENST00000384012 112 ntBASIC1.33□□□□□ -2.2
GPC3P51654 MIR194-1-201ENST00000384892 85 ntBASIC1.33□□□□□ -2.2
GPC3P51654 AC138393.2-201ENST00000414742 246 ntBASIC1.33□□□□□ -2.2
GPC3P51654 EIF1P2-201ENST00000428233 350 ntBASIC1.33□□□□□ -2.2
GPC3P51654 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.33□□□□□ -2.2
GPC3P51654 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.33□□□□□ -2.2
GPC3P51654 AC074133.1-201ENST00000515696 183 ntBASIC1.33□□□□□ -2.2
GPC3P51654 Y_RNA.673-201ENST00000516306 88 ntBASIC1.33□□□□□ -2.2
GPC3P51654 RNU1-142P-201ENST00000516682 145 ntBASIC1.33□□□□□ -2.2
GPC3P51654 SNORA20.3-201ENST00000516880 132 ntBASIC1.33□□□□□ -2.2
GPC3P51654 AC004584.2-201ENST00000570407 410 ntBASIC1.33□□□□□ -2.2
GPC3P51654 AL359075.3-201ENST00000613288 217 ntBASIC1.33□□□□□ -2.2
GPC3P51654 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
GPC3P51654 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
GPC3P51654 RNU6-727P-201ENST00000363592 107 ntBASIC1.32□□□□□ -2.2
GPC3P51654 SNORD87-201ENST00000364849 89 ntBASIC1.32□□□□□ -2.2
GPC3P51654 SNORD81.2-201ENST00000365153 76 ntBASIC1.32□□□□□ -2.2
GPC3P51654 SNORA4.2-201ENST00000365313 147 ntBASIC1.32□□□□□ -2.2
GPC3P51654 RNA5SP259-201ENST00000365541 109 ntBASIC1.32□□□□□ -2.2
GPC3P51654 RNU6-417P-201ENST00000384712 107 ntBASIC1.32□□□□□ -2.2
GPC3P51654 RBMX2P4-201ENST00000441256 376 ntBASIC1.32□□□□□ -2.2
GPC3P51654 MTND4P18-201ENST00000447010 465 ntBASIC1.32□□□□□ -2.2
GPC3P51654 RPL7P42-201ENST00000481005 679 ntBASIC1.32□□□□□ -2.2
GPC3P51654 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.32□□□□□ -2.2
GPC3P51654 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.32□□□□□ -2.2
GPC3P51654 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.32□□□□□ -2.2
GPC3P51654 MZT1P2-201ENST00000604387 248 ntBASIC1.32□□□□□ -2.2
GPC3P51654 RBM11P1-201ENST00000604951 799 ntBASIC1.32□□□□□ -2.2
GPC3P51654 MIR625-201ENST00000385047 85 ntBASIC1.31□□□□□ -2.2
GPC3P51654 MIR618-201ENST00000385287 98 ntBASIC1.31□□□□□ -2.2
GPC3P51654 PDCL2P1-201ENST00000419302 352 ntBASIC1.31□□□□□ -2.2
GPC3P51654 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.31□□□□□ -2.2
GPC3P51654 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.31□□□□□ -2.2
GPC3P51654 RNU7-87P-201ENST00000459343 62 ntBASIC1.31□□□□□ -2.2
GPC3P51654 RNU7-94P-201ENST00000459576 63 ntBASIC1.31□□□□□ -2.2
GPC3P51654 AC093852.1-201ENST00000503587 266 ntBASIC1.31□□□□□ -2.2
GPC3P51654 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.31□□□□□ -2.2
GPC3P51654 RN7SKP49-201ENST00000516675 260 ntBASIC1.31□□□□□ -2.2
GPC3P51654 AC090821.2-201ENST00000523552 176 ntBASIC1.31□□□□□ -2.2
GPC3P51654 AL512310.8-201ENST00000550183 120 ntBASIC1.31□□□□□ -2.2
GPC3P51654 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.31□□□□□ -2.2
GPC3P51654 CYP3A52P-201ENST00000563326 91 ntBASIC1.31□□□□□ -2.2
GPC3P51654 AC113139.1-201ENST00000605049 239 ntBASIC1.31□□□□□ -2.2
GPC3P51654 AL365434.2-201ENST00000607979 234 ntBASIC1.31□□□□□ -2.2
GPC3P51654 MIR6504-201ENST00000613520 61 ntBASIC1.31□□□□□ -2.2
GPC3P51654 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.31□□□□□ -2.2
GPC3P51654 AL669831.3-213ENST00000636676 183 ntBASIC1.31□□□□□ -2.2
GPC3P51654 Y_RNA.287-201ENST00000364853 94 ntBASIC1.3□□□□□ -2.2
GPC3P51654 RNU6-1264P-201ENST00000383891 107 ntBASIC1.3□□□□□ -2.2
GPC3P51654 Y_RNA.577-201ENST00000384794 101 ntBASIC1.3□□□□□ -2.2
GPC3P51654 MTCYBP4-201ENST00000401524 249 ntBASIC1.3□□□□□ -2.2
GPC3P51654 AC010154.1-201ENST00000425857 269 ntBASIC1.3□□□□□ -2.2
GPC3P51654 AC092423.1-201ENST00000430165 186 ntBASIC1.3□□□□□ -2.2
GPC3P51654 AL445305.1-201ENST00000432577 575 ntBASIC1.3□□□□□ -2.2
GPC3P51654 AL353997.1-201ENST00000432936 108 ntBASIC1.3□□□□□ -2.2
GPC3P51654 UQCRBP2-201ENST00000447827 297 ntBASIC1.3□□□□□ -2.2
GPC3P51654 SUMO1P2-201ENST00000452524 304 ntBASIC1.3□□□□□ -2.2
GPC3P51654 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.3□□□□□ -2.2
GPC3P51654 RNU7-40P-201ENST00000516397 64 ntBASIC1.3□□□□□ -2.2
GPC3P51654 SCARNA16.2-201ENST00000516520 172 ntBASIC1.3□□□□□ -2.2
GPC3P51654 RNU6-107P-201ENST00000516643 102 ntBASIC1.3□□□□□ -2.2
GPC3P51654 RNU7-4P-201ENST00000516961 62 ntBASIC1.3□□□□□ -2.2
GPC3P51654 AL355073.2-201ENST00000612106 557 ntBASIC1.3□□□□□ -2.2
GPC3P51654 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.3□□□□□ -2.2
GPC3P51654 AC104260.1-201ENST00000616660 539 ntBASIC1.3□□□□□ -2.2
GPC3P51654 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.3□□□□□ -2.2
GPC3P51654 RNU6-222P-201ENST00000362438 107 ntBASIC1.29□□□□□ -2.2
GPC3P51654 RNU6-879P-201ENST00000364328 108 ntBASIC1.29□□□□□ -2.2
GPC3P51654 Y_RNA.404-201ENST00000383978 102 ntBASIC1.29□□□□□ -2.2
GPC3P51654 RNU6-1145P-201ENST00000384246 107 ntBASIC1.29□□□□□ -2.2
GPC3P51654 Y_RNA.473-201ENST00000384333 102 ntBASIC1.29□□□□□ -2.2
GPC3P51654 MIR329-1-201ENST00000385028 80 ntBASIC1.29□□□□□ -2.2
GPC3P51654 SNORA75.6-201ENST00000391318 127 ntBASIC1.29□□□□□ -2.2
GPC3P51654 RNU6-370P-201ENST00000411008 104 ntBASIC1.29□□□□□ -2.2
GPC3P51654 AC016909.1-201ENST00000415916 166 ntBASIC1.29□□□□□ -2.2
GPC3P51654 PCNPP5-201ENST00000452246 481 ntBASIC1.29□□□□□ -2.2
GPC3P51654 COX6CP14-201ENST00000469580 174 ntBASIC1.29□□□□□ -2.2
GPC3P51654 AC010598.1-201ENST00000510378 103 ntBASIC1.29□□□□□ -2.2
GPC3P51654 RN7SKP88-201ENST00000516847 250 ntBASIC1.29□□□□□ -2.2
GPC3P51654 AL442163.3-201ENST00000554110 156 ntBASIC1.29□□□□□ -2.2
GPC3P51654 UBE2V2P2-201ENST00000587677 504 ntBASIC1.29□□□□□ -2.2
GPC3P51654 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.29□□□□□ -2.2
GPC3P51654 7SK.8-201ENST00000612110 250 ntBASIC1.29□□□□□ -2.2
GPC3P51654 7SK.11-201ENST00000615477 250 ntBASIC1.29□□□□□ -2.2
GPC3P51654 7SK.13-201ENST00000622040 250 ntBASIC1.29□□□□□ -2.2
GPC3P51654 RNU6-1188P-201ENST00000363795 107 ntBASIC1.28□□□□□ -2.2
GPC3P51654 Y_RNA.384-201ENST00000383909 102 ntBASIC1.28□□□□□ -2.2
GPC3P51654 RNU6-1310P-201ENST00000384153 107 ntBASIC1.28□□□□□ -2.2
GPC3P51654 Y_RNA.557-201ENST00000384680 107 ntBASIC1.28□□□□□ -2.2
GPC3P51654 MIR562-201ENST00000384894 95 ntBASIC1.28□□□□□ -2.2
GPC3P51654 AC114482.1-201ENST00000418010 247 ntBASIC1.28□□□□□ -2.2
GPC3P51654 PGBD4P5-201ENST00000445958 426 ntBASIC1.28□□□□□ -2.2
GPC3P51654 MIR2053-201ENST00000459295 91 ntBASIC1.28□□□□□ -2.2
GPC3P51654 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.28□□□□□ -2.2
GPC3P51654 RNU7-99P-201ENST00000516271 62 ntBASIC1.28□□□□□ -2.2
GPC3P51654 AC144568.1-201ENST00000520139 137 ntBASIC1.28□□□□□ -2.2
GPC3P51654 AK6P2-201ENST00000549020 471 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms