Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SNORA20B-201ENST00000384220 132 ntBASIC2.03□□□□□ -2.08
CENPAP49450 RNU6-417P-201ENST00000384712 107 ntBASIC2.03□□□□□ -2.08
CENPAP49450 HMGN2P3-201ENST00000433603 273 ntBASIC2.03□□□□□ -2.08
CENPAP49450 HMGN2P5-201ENST00000436882 273 ntBASIC2.03□□□□□ -2.08
CENPAP49450 MTND3P2-201ENST00000438452 342 ntBASIC2.03□□□□□ -2.08
CENPAP49450 RPL23AP42-201ENST00000471152 471 ntBASIC2.03□□□□□ -2.08
CENPAP49450 AC104435.1-201ENST00000483483 166 ntBASIC2.03□□□□□ -2.08
CENPAP49450 HMGB3P17-201ENST00000504195 649 ntBASIC2.03□□□□□ -2.08
CENPAP49450 YWHAEP4-201ENST00000505390 198 ntBASIC2.03□□□□□ -2.08
CENPAP49450 AC010598.1-201ENST00000510378 103 ntBASIC2.03□□□□□ -2.08
CENPAP49450 RNU6-966P-201ENST00000516479 104 ntBASIC2.03□□□□□ -2.08
CENPAP49450 RNU6-570P-201ENST00000517051 105 ntBASIC2.03□□□□□ -2.08
CENPAP49450 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.03□□□□□ -2.08
CENPAP49450 MIR4299-201ENST00000577899 72 ntBASIC2.03□□□□□ -2.08
CENPAP49450 MIR3945-201ENST00000581853 98 ntBASIC2.03□□□□□ -2.08
CENPAP49450 U2.15-201ENST00000611544 191 ntBASIC2.03□□□□□ -2.08
CENPAP49450 U2.16-201ENST00000613119 191 ntBASIC2.03□□□□□ -2.08
CENPAP49450 U2.12-201ENST00000613778 191 ntBASIC2.03□□□□□ -2.08
CENPAP49450 U2.20-201ENST00000613956 192 ntBASIC2.03□□□□□ -2.08
CENPAP49450 U2.9-201ENST00000615427 191 ntBASIC2.03□□□□□ -2.08
CENPAP49450 U2.11-201ENST00000616345 191 ntBASIC2.03□□□□□ -2.08
CENPAP49450 U2.2-201ENST00000616535 191 ntBASIC2.03□□□□□ -2.08
CENPAP49450 U2.3-201ENST00000617785 191 ntBASIC2.03□□□□□ -2.08
CENPAP49450 U2.19-201ENST00000618602 191 ntBASIC2.03□□□□□ -2.08
CENPAP49450 RNU2-1-201ENST00000618664 191 ntBASIC2.03□□□□□ -2.08
CENPAP49450 U2.6-201ENST00000619225 191 ntBASIC2.03□□□□□ -2.08
CENPAP49450 U2.5-201ENST00000619465 191 ntBASIC2.03□□□□□ -2.08
CENPAP49450 U2.10-201ENST00000620268 191 ntBASIC2.03□□□□□ -2.08
CENPAP49450 IGHVIII-44-202ENST00000636235 289 ntBASIC2.03□□□□□ -2.08
CENPAP49450 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CENPAP49450 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CENPAP49450 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CENPAP49450 Y_RNA.133-201ENST00000363428 110 ntBASIC2.02□□□□□ -2.09
CENPAP49450 Y_RNA.243-201ENST00000364481 109 ntBASIC2.02□□□□□ -2.09
CENPAP49450 Y_RNA.286-201ENST00000364813 102 ntBASIC2.02□□□□□ -2.09
CENPAP49450 RNU6-407P-201ENST00000365280 104 ntBASIC2.02□□□□□ -2.09
CENPAP49450 RNU6-102P-201ENST00000384485 104 ntBASIC2.02□□□□□ -2.09
CENPAP49450 RNA5SP465-201ENST00000391195 109 ntBASIC2.02□□□□□ -2.09
CENPAP49450 AL355796.1-201ENST00000406706 323 ntBASIC2.02□□□□□ -2.09
CENPAP49450 RNU6-1199P-201ENST00000411249 104 ntBASIC2.02□□□□□ -2.09
CENPAP49450 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.02□□□□□ -2.09
CENPAP49450 POLR2KP2-201ENST00000438155 177 ntBASIC2.02□□□□□ -2.09
CENPAP49450 RPS27P22-201ENST00000478056 241 ntBASIC2.02□□□□□ -2.09
CENPAP49450 AC025465.3-201ENST00000510570 311 ntBASIC2.02□□□□□ -2.09
CENPAP49450 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.02□□□□□ -2.09
CENPAP49450 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.02□□□□□ -2.09
CENPAP49450 AC009831.4-201ENST00000620744 325 ntBASIC2.02□□□□□ -2.09
CENPAP49450 MIR6132-201ENST00000622083 109 ntBASIC2.02□□□□□ -2.09
CENPAP49450 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.02□□□□□ -2.09
CENPAP49450 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
CENPAP49450 RNU4-90P-201ENST00000362773 141 ntBASIC2.01□□□□□ -2.09
CENPAP49450 RNU6-862P-201ENST00000362804 105 ntBASIC2.01□□□□□ -2.09
CENPAP49450 snoU2-30.2-201ENST00000362805 70 ntBASIC2.01□□□□□ -2.09
CENPAP49450 SNORA67.4-201ENST00000384688 142 ntBASIC2.01□□□□□ -2.09
CENPAP49450 MIR215-201ENST00000384858 110 ntBASIC2.01□□□□□ -2.09
CENPAP49450 AL031003.1-201ENST00000404229 172 ntBASIC2.01□□□□□ -2.09
CENPAP49450 MIR1302-3-201ENST00000408128 138 ntBASIC2.01□□□□□ -2.09
CENPAP49450 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.01□□□□□ -2.09
CENPAP49450 AL158823.1-201ENST00000418441 478 ntBASIC2.01□□□□□ -2.09
CENPAP49450 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.01□□□□□ -2.09
CENPAP49450 RPL23AP6-201ENST00000446637 472 ntBASIC2.01□□□□□ -2.09
CENPAP49450 SUMO1P2-201ENST00000452524 304 ntBASIC2.01□□□□□ -2.09
CENPAP49450 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.01□□□□□ -2.09
CENPAP49450 HMGN1P10-201ENST00000474557 553 ntBASIC2.01□□□□□ -2.09
CENPAP49450 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.01□□□□□ -2.09
CENPAP49450 MTCO2P24-201ENST00000515611 426 ntBASIC2.01□□□□□ -2.09
CENPAP49450 RNU6-496P-201ENST00000516145 99 ntBASIC2.01□□□□□ -2.09
CENPAP49450 RNA5SP200-201ENST00000516360 103 ntBASIC2.01□□□□□ -2.09
CENPAP49450 RNA5SP281-201ENST00000516504 135 ntBASIC2.01□□□□□ -2.09
CENPAP49450 RNA5SP364-201ENST00000516938 78 ntBASIC2.01□□□□□ -2.09
CENPAP49450 AC023157.2-201ENST00000540596 141 ntBASIC2.01□□□□□ -2.09
CENPAP49450 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.01□□□□□ -2.09
CENPAP49450 AC005786.1-201ENST00000588553 154 ntBASIC2.01□□□□□ -2.09
CENPAP49450 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CENPAP49450 snoU2_19.2-201ENST00000363024 80 ntBASIC2□□□□□ -2.09
CENPAP49450 RNU6-271P-201ENST00000363858 105 ntBASIC2□□□□□ -2.09
CENPAP49450 SNORD115-30-201ENST00000364117 82 ntBASIC2□□□□□ -2.09
CENPAP49450 Y_RNA.329-201ENST00000365209 107 ntBASIC2□□□□□ -2.09
CENPAP49450 Y_RNA.383-201ENST00000383855 97 ntBASIC2□□□□□ -2.09
CENPAP49450 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
CENPAP49450 Y_RNA.581-201ENST00000391017 97 ntBASIC2□□□□□ -2.09
CENPAP49450 MIR1302-6-201ENST00000408466 90 ntBASIC2□□□□□ -2.09
CENPAP49450 AL121890.1-201ENST00000435457 205 ntBASIC2□□□□□ -2.09
CENPAP49450 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2□□□□□ -2.09
CENPAP49450 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2□□□□□ -2.09
CENPAP49450 AL137100.2-201ENST00000555786 315 ntBASIC2□□□□□ -2.09
CENPAP49450 AC012493.3-201ENST00000604494 112 ntBASIC2□□□□□ -2.09
CENPAP49450 MIR338-201ENST00000636369 67 ntBASIC2□□□□□ -2.09
CENPAP49450 U6.104-201ENST00000637979 90 ntBASIC2□□□□□ -2.09
CENPAP49450 MTND5P6-201ENST00000422338 1798 ntBASIC2□□□□□ -2.09
CENPAP49450 AC010615.1-201ENST00000594254 1764 ntBASIC2□□□□□ -2.09
CENPAP49450 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
CENPAP49450 RNU4-82P-201ENST00000362443 140 ntBASIC1.99□□□□□ -2.09
CENPAP49450 SNORD81.1-201ENST00000363064 77 ntBASIC1.99□□□□□ -2.09
CENPAP49450 RNU1-96P-201ENST00000364163 162 ntBASIC1.99□□□□□ -2.09
CENPAP49450 Y_RNA.287-201ENST00000364853 94 ntBASIC1.99□□□□□ -2.09
CENPAP49450 Y_RNA.461-201ENST00000384263 103 ntBASIC1.99□□□□□ -2.09
CENPAP49450 RNA5SP323-201ENST00000391094 133 ntBASIC1.99□□□□□ -2.09
CENPAP49450 MIR873-201ENST00000401120 77 ntBASIC1.99□□□□□ -2.09
CENPAP49450 SNORA11.4-201ENST00000408823 129 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms