Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 Y_RNA.136-201ENST00000363444 102 ntBASIC1.72□□□□□ -2.13
NKX2-1P43699 Y_RNA.143-201ENST00000363520 106 ntBASIC1.72□□□□□ -2.13
NKX2-1P43699 RNU6-1175P-201ENST00000365200 107 ntBASIC1.72□□□□□ -2.13
NKX2-1P43699 RNU6-926P-201ENST00000384075 107 ntBASIC1.72□□□□□ -2.13
NKX2-1P43699 RNU6-121P-201ENST00000410525 99 ntBASIC1.72□□□□□ -2.13
NKX2-1P43699 RNU6-57P-201ENST00000411348 103 ntBASIC1.72□□□□□ -2.13
NKX2-1P43699 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.72□□□□□ -2.13
NKX2-1P43699 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.72□□□□□ -2.13
NKX2-1P43699 DPH3P2-201ENST00000422618 250 ntBASIC1.72□□□□□ -2.13
NKX2-1P43699 HSPE1P13-201ENST00000451143 297 ntBASIC1.72□□□□□ -2.13
NKX2-1P43699 SNORA40.15-201ENST00000516884 107 ntBASIC1.72□□□□□ -2.13
NKX2-1P43699 AC024995.1-201ENST00000523014 93 ntBASIC1.72□□□□□ -2.13
NKX2-1P43699 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.72□□□□□ -2.13
NKX2-1P43699 AC022254.1-201ENST00000567857 235 ntBASIC1.72□□□□□ -2.13
NKX2-1P43699 MIR4299-201ENST00000577899 72 ntBASIC1.72□□□□□ -2.13
NKX2-1P43699 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.72□□□□□ -2.13
NKX2-1P43699 MIR338-201ENST00000636369 67 ntBASIC1.72□□□□□ -2.13
NKX2-1P43699 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
NKX2-1P43699 CENPCP1-201ENST00000533085 2578 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 Y_RNA.19-201ENST00000362462 99 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 RNA5SP276-201ENST00000362580 94 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 snoU2-30.2-201ENST00000362805 70 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 Y_RNA.176-201ENST00000363815 109 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 RNU6-271P-201ENST00000363858 105 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 SNORA72.2-201ENST00000365028 127 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 Y_RNA.510-201ENST00000384511 114 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 Y_RNA.556-201ENST00000384677 113 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 Y_RNA.574-201ENST00000384766 95 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 MIR676-201ENST00000390702 67 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.71□□□□□ -2.14
NKX2-1P43699 AC010154.1-201ENST00000425857 269 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 MTCYBP9-201ENST00000431021 303 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 AC069257.2-201ENST00000441819 155 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.71□□□□□ -2.14
NKX2-1P43699 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.71□□□□□ -2.14
NKX2-1P43699 RNU6-436P-201ENST00000516171 114 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 RNVU1-2-201ENST00000516326 135 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 AL161670.1-201ENST00000554348 137 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 MIR4713-201ENST00000582691 75 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 AC006380.1-201ENST00000603598 186 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 AC069114.2-201ENST00000604699 304 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 AC011373.1-201ENST00000607270 237 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 MIR376A1-201ENST00000616574 68 ntBASIC1.71□□□□□ -2.14
NKX2-1P43699 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
NKX2-1P43699 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
NKX2-1P43699 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
NKX2-1P43699 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
NKX2-1P43699 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
NKX2-1P43699 MIR335-201ENST00000362173 94 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 SNORA27.1-201ENST00000362604 124 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 RNU6-1266P-201ENST00000362794 105 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 RNU6-1019P-201ENST00000364424 107 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 Y_RNA.459-201ENST00000384251 102 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 RNU6-937P-201ENST00000384325 106 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 MIR873-201ENST00000401120 77 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 AL355796.1-201ENST00000406706 323 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 RNA5SP100-201ENST00000410903 110 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 RNA5SP59-201ENST00000410922 110 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 RNU2-61P-201ENST00000411069 191 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.7□□□□□ -2.14
NKX2-1P43699 MTND4LP30-201ENST00000454092 297 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 RPL36AP21-201ENST00000490372 323 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 SNORA70.12-201ENST00000516084 153 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 RNU6-1046P-201ENST00000516538 107 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 SCARNA16.3-201ENST00000516595 184 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 RNU6-107P-201ENST00000516643 102 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 AL162730.1-201ENST00000605734 292 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 U6.73-201ENST00000619194 103 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 MIR8062-201ENST00000621515 85 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.7□□□□□ -2.14
NKX2-1P43699 RNU4-90P-201ENST00000362773 141 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 snoU2_19.2-201ENST00000363024 80 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 Y_RNA.105-201ENST00000363182 111 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 Y_RNA.149-201ENST00000363558 117 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 Y_RNA.287-201ENST00000364853 94 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 RNU6-326P-201ENST00000365480 107 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 SNORA20B-201ENST00000384220 132 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 AC099677.2-201ENST00000436385 175 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 HMGN2P34-201ENST00000437647 269 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 MTND3P2-201ENST00000438452 342 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 HSPE1P25-201ENST00000455484 251 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.69□□□□□ -2.14
NKX2-1P43699 HMGN1P10-201ENST00000474557 553 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 RNU6-1041P-201ENST00000516254 102 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.69□□□□□ -2.14
NKX2-1P43699 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.69□□□□□ -2.14
NKX2-1P43699 AP003733.2-201ENST00000529409 171 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.69□□□□□ -2.14
NKX2-1P43699 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.69□□□□□ -2.14
NKX2-1P43699 AL137100.2-201ENST00000555786 315 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.69□□□□□ -2.14
NKX2-1P43699 uc_338.20-201ENST00000621563 178 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.69□□□□□ -2.14
NKX2-1P43699 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.69□□□□□ -2.14
NKX2-1P43699 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.68□□□□□ -2.14
NKX2-1P43699 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
NKX2-1P43699 Y_RNA.47-201ENST00000362697 108 ntBASIC1.68□□□□□ -2.14
NKX2-1P43699 RNU6-862P-201ENST00000362804 105 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms