Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.97□□□□□ -2.25
RORAP35398 DYNLT3P2-201ENST00000442517 295 ntBASIC0.97□□□□□ -2.25
RORAP35398 MTND5P5-201ENST00000503764 376 ntBASIC0.97□□□□□ -2.25
RORAP35398 Y_RNA.683-201ENST00000516508 93 ntBASIC0.97□□□□□ -2.25
RORAP35398 RNU6-113P-201ENST00000516653 101 ntBASIC0.97□□□□□ -2.25
RORAP35398 AC093023.1-201ENST00000547375 507 ntBASIC0.97□□□□□ -2.25
RORAP35398 FAM106DP-201ENST00000586416 501 ntBASIC0.97□□□□□ -2.25
RORAP35398 BX284668.6-201ENST00000606899 438 ntBASIC0.97□□□□□ -2.25
RORAP35398 AC005014.2-201ENST00000607795 599 ntBASIC0.97□□□□□ -2.25
RORAP35398 AL021879.1-201ENST00000611756 288 ntBASIC0.97□□□□□ -2.25
RORAP35398 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.97□□□□□ -2.25
RORAP35398 AL513423.1-201ENST00000621695 132 ntBASIC0.97□□□□□ -2.25
RORAP35398 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.97□□□□□ -2.25
RORAP35398 AC018630.2-201ENST00000534866 2403 ntBASIC0.97□□□□□ -2.25
RORAP35398 Y_RNA.122-201ENST00000363331 96 ntBASIC0.96□□□□□ -2.26
RORAP35398 Y_RNA.184-201ENST00000363884 108 ntBASIC0.96□□□□□ -2.26
RORAP35398 SNORA25-201ENST00000384384 134 ntBASIC0.96□□□□□ -2.26
RORAP35398 AL034345.1-201ENST00000407768 123 ntBASIC0.96□□□□□ -2.26
RORAP35398 MIR548F1-201ENST00000408667 84 ntBASIC0.96□□□□□ -2.26
RORAP35398 ELOCP21-201ENST00000412558 336 ntBASIC0.96□□□□□ -2.26
RORAP35398 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.96□□□□□ -2.26
RORAP35398 EIF1P2-201ENST00000428233 350 ntBASIC0.96□□□□□ -2.26
RORAP35398 RNU7-94P-201ENST00000459576 63 ntBASIC0.96□□□□□ -2.26
RORAP35398 AC010469.2-201ENST00000496412 480 ntBASIC0.96□□□□□ -2.26
RORAP35398 AC026782.1-201ENST00000512952 449 ntBASIC0.96□□□□□ -2.26
RORAP35398 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.96□□□□□ -2.26
RORAP35398 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.96□□□□□ -2.26
RORAP35398 MIR7111-201ENST00000619751 72 ntBASIC0.96□□□□□ -2.26
RORAP35398 AC106754.2-201ENST00000623006 233 ntBASIC0.96□□□□□ -2.26
RORAP35398 AC027335.2-201ENST00000624030 375 ntBASIC0.96□□□□□ -2.26
RORAP35398 AC068137.4-201ENST00000638485 296 ntBASIC0.96□□□□□ -2.26
RORAP35398 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
RORAP35398 MTND5P16-201ENST00000460269 1703 ntBASIC0.95□□□□□ -2.26
RORAP35398 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
RORAP35398 SNORA20B-201ENST00000384220 132 ntBASIC0.95□□□□□ -2.26
RORAP35398 MIR329-1-201ENST00000385028 80 ntBASIC0.95□□□□□ -2.26
RORAP35398 MIR660-201ENST00000385235 97 ntBASIC0.95□□□□□ -2.26
RORAP35398 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
RORAP35398 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
RORAP35398 AC009161.1-201ENST00000417306 376 ntBASIC0.95□□□□□ -2.26
RORAP35398 USP9YP16-201ENST00000430287 407 ntBASIC0.95□□□□□ -2.26
RORAP35398 MTND4LP16-201ENST00000440828 295 ntBASIC0.95□□□□□ -2.26
RORAP35398 USP9YP23-201ENST00000455085 407 ntBASIC0.95□□□□□ -2.26
RORAP35398 RNU6-329P-201ENST00000459618 107 ntBASIC0.95□□□□□ -2.26
RORAP35398 AC010598.1-201ENST00000510378 103 ntBASIC0.95□□□□□ -2.26
RORAP35398 AC097462.1-201ENST00000514125 324 ntBASIC0.95□□□□□ -2.26
RORAP35398 AC046134.1-201ENST00000514454 666 ntBASIC0.95□□□□□ -2.26
RORAP35398 RNU1-54P-201ENST00000517181 120 ntBASIC0.95□□□□□ -2.26
RORAP35398 AP002001.1-203ENST00000534002 267 ntBASIC0.95□□□□□ -2.26
RORAP35398 MIR4790-201ENST00000577799 79 ntBASIC0.95□□□□□ -2.26
RORAP35398 AC018462.2-201ENST00000605375 395 ntBASIC0.95□□□□□ -2.26
RORAP35398 AL022345.2-201ENST00000606307 135 ntBASIC0.95□□□□□ -2.26
RORAP35398 AC100812.1-201ENST00000607622 580 ntBASIC0.95□□□□□ -2.26
RORAP35398 U4.5-201ENST00000617137 123 ntBASIC0.95□□□□□ -2.26
RORAP35398 AC073349.3-201ENST00000617616 186 ntBASIC0.95□□□□□ -2.26
RORAP35398 AC006435.5-201ENST00000624486 112 ntBASIC0.95□□□□□ -2.26
RORAP35398 MIR373-201ENST00000362273 69 ntBASIC0.94□□□□□ -2.26
RORAP35398 RNA5SP361-201ENST00000362686 118 ntBASIC0.94□□□□□ -2.26
RORAP35398 RNU1-124P-201ENST00000363861 145 ntBASIC0.94□□□□□ -2.26
RORAP35398 USMG5P1-201ENST00000425964 177 ntBASIC0.94□□□□□ -2.26
RORAP35398 RAB28P5-201ENST00000427490 651 ntBASIC0.94□□□□□ -2.26
RORAP35398 STAG3L5P-204ENST00000443759 179 ntBASIC0.94□□□□□ -2.26
RORAP35398 U8.22-201ENST00000459141 133 ntBASIC0.94□□□□□ -2.26
RORAP35398 RPS29P1-201ENST00000465274 159 ntBASIC0.94□□□□□ -2.26
RORAP35398 RPS27P22-201ENST00000478056 241 ntBASIC0.94□□□□□ -2.26
RORAP35398 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.94□□□□□ -2.26
RORAP35398 AC018710.1-201ENST00000506509 158 ntBASIC0.94□□□□□ -2.26
RORAP35398 Y_RNA.682-201ENST00000516457 100 ntBASIC0.94□□□□□ -2.26
RORAP35398 RNU6-107P-201ENST00000516643 102 ntBASIC0.94□□□□□ -2.26
RORAP35398 RNU6-922P-201ENST00000516753 99 ntBASIC0.94□□□□□ -2.26
RORAP35398 Y_RNA.706-201ENST00000516933 99 ntBASIC0.94□□□□□ -2.26
RORAP35398 CYCSP23-201ENST00000519781 313 ntBASIC0.94□□□□□ -2.26
RORAP35398 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.94□□□□□ -2.26
RORAP35398 MIR4778-201ENST00000577635 80 ntBASIC0.94□□□□□ -2.26
RORAP35398 AL162424.1-201ENST00000602325 221 ntBASIC0.94□□□□□ -2.26
RORAP35398 SNORD3E-202ENST00000627253 216 ntBASIC0.94□□□□□ -2.26
RORAP35398 MIR6079-201ENST00000635807 62 ntBASIC0.94□□□□□ -2.26
RORAP35398 Y_RNA.118-201ENST00000363300 101 ntBASIC0.93□□□□□ -2.26
RORAP35398 RNU4-40P-201ENST00000364351 143 ntBASIC0.93□□□□□ -2.26
RORAP35398 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
RORAP35398 RNU6-1013P-201ENST00000384180 107 ntBASIC0.93□□□□□ -2.26
RORAP35398 Y_RNA.453-201ENST00000384223 109 ntBASIC0.93□□□□□ -2.26
RORAP35398 RNU6-1145P-201ENST00000384246 107 ntBASIC0.93□□□□□ -2.26
RORAP35398 SNORD41-201ENST00000386967 70 ntBASIC0.93□□□□□ -2.26
RORAP35398 CALM2P4-201ENST00000430810 426 ntBASIC0.93□□□□□ -2.26
RORAP35398 snoU13.18-201ENST00000459483 104 ntBASIC0.93□□□□□ -2.26
RORAP35398 AC092989.1-201ENST00000481235 277 ntBASIC0.93□□□□□ -2.26
RORAP35398 SNORD116-28-201ENST00000516123 91 ntBASIC0.93□□□□□ -2.26
RORAP35398 AC105029.1-201ENST00000520250 669 ntBASIC0.93□□□□□ -2.26
RORAP35398 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.93□□□□□ -2.26
RORAP35398 MIR4661-201ENST00000582720 75 ntBASIC0.93□□□□□ -2.26
RORAP35398 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.93□□□□□ -2.26
RORAP35398 RMST_2.1-201ENST00000617263 136 ntBASIC0.93□□□□□ -2.26
RORAP35398 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.93□□□□□ -2.26
RORAP35398 AL391516.1-201ENST00000554380 2449 ntBASIC0.92□□□□□ -2.26
RORAP35398 Y_RNA.573-201ENST00000384763 105 ntBASIC0.92□□□□□ -2.26
RORAP35398 MIR532-201ENST00000385025 91 ntBASIC0.92□□□□□ -2.26
RORAP35398 MIR653-201ENST00000385279 96 ntBASIC0.92□□□□□ -2.26
RORAP35398 MIR190B-201ENST00000401119 79 ntBASIC0.92□□□□□ -2.26
RORAP35398 MIR548K-201ENST00000408406 116 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms