Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 AC015720.1-201ENST00000565251 277 ntBASIC2.67□□□□□ -1.98
SDHAP31040 MIR5688-201ENST00000580619 83 ntBASIC2.67□□□□□ -1.98
SDHAP31040 MIR3133-201ENST00000583157 78 ntBASIC2.67□□□□□ -1.98
SDHAP31040 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SDHAP31040 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.66□□□□□ -1.98
SDHAP31040 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.66□□□□□ -1.98
SDHAP31040 snoU2-30.2-201ENST00000362805 70 ntBASIC2.66□□□□□ -1.98
SDHAP31040 SNORD56.5-201ENST00000364281 72 ntBASIC2.66□□□□□ -1.98
SDHAP31040 RNU6-117P-201ENST00000365415 107 ntBASIC2.66□□□□□ -1.98
SDHAP31040 MIR34B-201ENST00000385076 84 ntBASIC2.66□□□□□ -1.98
SDHAP31040 EDDM3CP-201ENST00000415977 425 ntBASIC2.66□□□□□ -1.98
SDHAP31040 AL162725.1-201ENST00000435405 301 ntBASIC2.66□□□□□ -1.98
SDHAP31040 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.66□□□□□ -1.98
SDHAP31040 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.66□□□□□ -1.98
SDHAP31040 RNU6-437P-201ENST00000459408 95 ntBASIC2.66□□□□□ -1.98
SDHAP31040 Y_RNA.703-201ENST00000516846 111 ntBASIC2.66□□□□□ -1.98
SDHAP31040 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.66□□□□□ -1.98
SDHAP31040 MIR5004-201ENST00000579078 107 ntBASIC2.66□□□□□ -1.98
SDHAP31040 MIR3144-201ENST00000579460 79 ntBASIC2.66□□□□□ -1.98
SDHAP31040 U6.73-201ENST00000619194 103 ntBASIC2.66□□□□□ -1.98
SDHAP31040 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SDHAP31040 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.65□□□□□ -1.98
SDHAP31040 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SDHAP31040 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.65□□□□□ -1.99
SDHAP31040 Y_RNA.23-201ENST00000362496 106 ntBASIC2.65□□□□□ -1.99
SDHAP31040 Y_RNA.170-201ENST00000363746 110 ntBASIC2.65□□□□□ -1.99
SDHAP31040 RNU1-91P-201ENST00000364746 163 ntBASIC2.65□□□□□ -1.99
SDHAP31040 RNU6-275P-201ENST00000364910 107 ntBASIC2.65□□□□□ -1.99
SDHAP31040 SNORA70.4-201ENST00000365509 134 ntBASIC2.65□□□□□ -1.99
SDHAP31040 SNORA54-201ENST00000384281 123 ntBASIC2.65□□□□□ -1.99
SDHAP31040 MIR616-201ENST00000385293 97 ntBASIC2.65□□□□□ -1.99
SDHAP31040 RNU6-578P-201ENST00000390980 103 ntBASIC2.65□□□□□ -1.99
SDHAP31040 RNU6-1135P-201ENST00000411083 103 ntBASIC2.65□□□□□ -1.99
SDHAP31040 RNU5E-9P-201ENST00000411164 104 ntBASIC2.65□□□□□ -1.99
SDHAP31040 RPS15AP28-201ENST00000435088 386 ntBASIC2.65□□□□□ -1.99
SDHAP31040 SEPT7P4-201ENST00000437076 306 ntBASIC2.65□□□□□ -1.99
SDHAP31040 AC245102.2-201ENST00000448956 180 ntBASIC2.65□□□□□ -1.99
SDHAP31040 RNU7-26P-201ENST00000458980 63 ntBASIC2.65□□□□□ -1.99
SDHAP31040 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.65□□□□□ -1.99
SDHAP31040 RNU6-453P-201ENST00000516819 85 ntBASIC2.65□□□□□ -1.99
SDHAP31040 AC026271.5-201ENST00000577873 130 ntBASIC2.65□□□□□ -1.99
SDHAP31040 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
SDHAP31040 AC073346.2-201ENST00000624724 2058 ntBASIC2.65□□□□□ -1.99
SDHAP31040 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SDHAP31040 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SDHAP31040 SNORD115-3-201ENST00000363100 82 ntBASIC2.64□□□□□ -1.99
SDHAP31040 SNORA38-201ENST00000363946 132 ntBASIC2.64□□□□□ -1.99
SDHAP31040 Y_RNA.229-201ENST00000364347 113 ntBASIC2.64□□□□□ -1.99
SDHAP31040 Y_RNA.272-201ENST00000364696 102 ntBASIC2.64□□□□□ -1.99
SDHAP31040 Y_RNA.333-201ENST00000365274 102 ntBASIC2.64□□□□□ -1.99
SDHAP31040 Y_RNA.506-201ENST00000384494 102 ntBASIC2.64□□□□□ -1.99
SDHAP31040 MIR1262-201ENST00000408276 93 ntBASIC2.64□□□□□ -1.99
SDHAP31040 RNU6-394P-201ENST00000410735 107 ntBASIC2.64□□□□□ -1.99
SDHAP31040 EBAG9P1-201ENST00000418955 543 ntBASIC2.64□□□□□ -1.99
SDHAP31040 AC107016.2-201ENST00000547968 190 ntBASIC2.64□□□□□ -1.99
SDHAP31040 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.64□□□□□ -1.99
SDHAP31040 LARP7P3-201ENST00000579888 337 ntBASIC2.64□□□□□ -1.99
SDHAP31040 AC007229.1-201ENST00000590455 412 ntBASIC2.64□□□□□ -1.99
SDHAP31040 AC108706.1-201ENST00000611053 297 ntBASIC2.64□□□□□ -1.99
SDHAP31040 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.63□□□□□ -1.99
SDHAP31040 MIR208A-201ENST00000362287 71 ntBASIC2.63□□□□□ -1.99
SDHAP31040 SNORA38.1-201ENST00000364172 131 ntBASIC2.63□□□□□ -1.99
SDHAP31040 SNORD114-6-201ENST00000364393 72 ntBASIC2.63□□□□□ -1.99
SDHAP31040 RNU4-41P-201ENST00000364426 143 ntBASIC2.63□□□□□ -1.99
SDHAP31040 SNORA71.1-201ENST00000364523 117 ntBASIC2.63□□□□□ -1.99
SDHAP31040 SNORA9.2-201ENST00000365361 133 ntBASIC2.63□□□□□ -1.99
SDHAP31040 Y_RNA.398-201ENST00000383952 99 ntBASIC2.63□□□□□ -1.99
SDHAP31040 MT-TT-201ENST00000387460 66 ntBASIC2.63□□□□□ -1.99
SDHAP31040 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.63□□□□□ -1.99
SDHAP31040 RPL23AP83-201ENST00000434984 473 ntBASIC2.63□□□□□ -1.99
SDHAP31040 ATP5J2P3-201ENST00000451550 258 ntBASIC2.63□□□□□ -1.99
SDHAP31040 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.63□□□□□ -1.99
SDHAP31040 SCARNA8-201ENST00000515924 131 ntBASIC2.63□□□□□ -1.99
SDHAP31040 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.63□□□□□ -1.99
SDHAP31040 AC073413.2-201ENST00000604332 360 ntBASIC2.63□□□□□ -1.99
SDHAP31040 AL391903.3-201ENST00000612158 163 ntBASIC2.63□□□□□ -1.99
SDHAP31040 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
SDHAP31040 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.63□□□□□ -1.99
SDHAP31040 RNU1-35P-201ENST00000362782 153 ntBASIC2.62□□□□□ -1.99
SDHAP31040 VTRNA1-1-201ENST00000363120 99 ntBASIC2.62□□□□□ -1.99
SDHAP31040 SNORD116-18-201ENST00000383961 92 ntBASIC2.62□□□□□ -1.99
SDHAP31040 Y_RNA.441-201ENST00000384123 112 ntBASIC2.62□□□□□ -1.99
SDHAP31040 RNU6-187P-201ENST00000384139 106 ntBASIC2.62□□□□□ -1.99
SDHAP31040 SNORA72-201ENST00000384339 132 ntBASIC2.62□□□□□ -1.99
SDHAP31040 RNU6-125P-201ENST00000384505 107 ntBASIC2.62□□□□□ -1.99
SDHAP31040 RNA5SP323-201ENST00000391094 133 ntBASIC2.62□□□□□ -1.99
SDHAP31040 RNU11-5P-201ENST00000391216 129 ntBASIC2.62□□□□□ -1.99
SDHAP31040 AL606845.1-201ENST00000404881 255 ntBASIC2.62□□□□□ -1.99
SDHAP31040 RNA5SP492-201ENST00000411330 114 ntBASIC2.62□□□□□ -1.99
SDHAP31040 HMGN2P35-201ENST00000412164 270 ntBASIC2.62□□□□□ -1.99
SDHAP31040 AL353689.1-201ENST00000438895 199 ntBASIC2.62□□□□□ -1.99
SDHAP31040 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.62□□□□□ -1.99
SDHAP31040 AL121914.1-201ENST00000450188 156 ntBASIC2.62□□□□□ -1.99
SDHAP31040 RN7SL504P-201ENST00000494496 287 ntBASIC2.62□□□□□ -1.99
SDHAP31040 AC008885.1-201ENST00000514930 301 ntBASIC2.62□□□□□ -1.99
SDHAP31040 MIR3126-201ENST00000577443 74 ntBASIC2.62□□□□□ -1.99
SDHAP31040 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.62□□□□□ -1.99
SDHAP31040 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.62□□□□□ -1.99
SDHAP31040 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SDHAP31040 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms