Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CNGA1P29973 AC107222.1-201ENST00000510899 637 ntBASIC2.71□□□□□ -1.98
CNGA1P29973 RNU6-1146P-201ENST00000516282 102 ntBASIC2.71□□□□□ -1.98
CNGA1P29973 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.71□□□□□ -1.98
CNGA1P29973 MIR4529-201ENST00000578110 78 ntBASIC2.71□□□□□ -1.98
CNGA1P29973 SDR42E1P4-201ENST00000620894 481 ntBASIC2.71□□□□□ -1.98
CNGA1P29973 MIR8062-201ENST00000621515 85 ntBASIC2.71□□□□□ -1.98
CNGA1P29973 MIR338-201ENST00000636369 67 ntBASIC2.71□□□□□ -1.98
CNGA1P29973 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.71□□□□□ -1.98
CNGA1P29973 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CNGA1P29973 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CNGA1P29973 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CNGA1P29973 SNORD114-7-201ENST00000362520 77 ntBASIC2.7□□□□□ -1.98
CNGA1P29973 Y_RNA.287-201ENST00000364853 94 ntBASIC2.7□□□□□ -1.98
CNGA1P29973 MIR215-201ENST00000384858 110 ntBASIC2.7□□□□□ -1.98
CNGA1P29973 RNU11-3P-201ENST00000391111 133 ntBASIC2.7□□□□□ -1.98
CNGA1P29973 AL031003.1-201ENST00000404229 172 ntBASIC2.7□□□□□ -1.98
CNGA1P29973 MIR1253-201ENST00000408273 105 ntBASIC2.7□□□□□ -1.98
CNGA1P29973 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.7□□□□□ -1.98
CNGA1P29973 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.7□□□□□ -1.98
CNGA1P29973 RNU6-548P-201ENST00000517083 115 ntBASIC2.7□□□□□ -1.98
CNGA1P29973 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.7□□□□□ -1.98
CNGA1P29973 AP006437.1-201ENST00000641440 3685 ntBASIC2.69□□□□□ -1.98
CNGA1P29973 SNORA27.1-201ENST00000362604 124 ntBASIC2.69□□□□□ -1.98
CNGA1P29973 RNU4-90P-201ENST00000362773 141 ntBASIC2.69□□□□□ -1.98
CNGA1P29973 SNORD23.1-201ENST00000408212 104 ntBASIC2.69□□□□□ -1.98
CNGA1P29973 RNA5SP450-201ENST00000411206 102 ntBASIC2.69□□□□□ -1.98
CNGA1P29973 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.69□□□□□ -1.98
CNGA1P29973 RNU6-436P-201ENST00000516171 114 ntBASIC2.69□□□□□ -1.98
CNGA1P29973 RNU2-19P-201ENST00000517288 84 ntBASIC2.69□□□□□ -1.98
CNGA1P29973 AP005660.1-201ENST00000522972 293 ntBASIC2.69□□□□□ -1.98
CNGA1P29973 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.69□□□□□ -1.98
CNGA1P29973 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.69□□□□□ -1.98
CNGA1P29973 AC103810.6-201ENST00000606708 136 ntBASIC2.69□□□□□ -1.98
CNGA1P29973 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CNGA1P29973 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
CNGA1P29973 Y_RNA.84-201ENST00000363011 104 ntBASIC2.68□□□□□ -1.98
CNGA1P29973 SNORA80E-201ENST00000384744 137 ntBASIC2.68□□□□□ -1.98
CNGA1P29973 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CNGA1P29973 MIR873-201ENST00000401120 77 ntBASIC2.68□□□□□ -1.98
CNGA1P29973 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CNGA1P29973 AC099677.2-201ENST00000436385 175 ntBASIC2.68□□□□□ -1.98
CNGA1P29973 AL161670.1-201ENST00000554348 137 ntBASIC2.68□□□□□ -1.98
CNGA1P29973 MIR1291-201ENST00000627649 87 ntBASIC2.68□□□□□ -1.98
CNGA1P29973 MTND5P6-201ENST00000422338 1798 ntBASIC2.68□□□□□ -1.98
CNGA1P29973 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CNGA1P29973 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.67□□□□□ -1.98
CNGA1P29973 RNU6-271P-201ENST00000363858 105 ntBASIC2.67□□□□□ -1.98
CNGA1P29973 RNU6-290P-201ENST00000365212 101 ntBASIC2.67□□□□□ -1.98
CNGA1P29973 Y_RNA.541-201ENST00000384640 113 ntBASIC2.67□□□□□ -1.98
CNGA1P29973 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CNGA1P29973 MTND2P29-201ENST00000438595 412 ntBASIC2.67□□□□□ -1.98
CNGA1P29973 IPO7P1-201ENST00000442031 636 ntBASIC2.67□□□□□ -1.98
CNGA1P29973 RPL23AP7-203ENST00000449021 469 ntBASIC2.67□□□□□ -1.98
CNGA1P29973 AC055731.1-201ENST00000474387 401 ntBASIC2.67□□□□□ -1.98
CNGA1P29973 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.67□□□□□ -1.98
CNGA1P29973 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.67□□□□□ -1.98
CNGA1P29973 AL137847.3-201ENST00000611521 109 ntBASIC2.67□□□□□ -1.98
CNGA1P29973 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.67□□□□□ -1.98
CNGA1P29973 AL353997.5-201ENST00000618886 171 ntBASIC2.67□□□□□ -1.98
CNGA1P29973 AC012640.5-201ENST00000623897 319 ntBASIC2.67□□□□□ -1.98
CNGA1P29973 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.67□□□□□ -1.98
CNGA1P29973 CENPCP1-201ENST00000533085 2578 ntBASIC2.66□□□□□ -1.98
CNGA1P29973 RNU6-862P-201ENST00000362804 105 ntBASIC2.66□□□□□ -1.98
CNGA1P29973 RNU6-324P-201ENST00000363957 106 ntBASIC2.66□□□□□ -1.98
CNGA1P29973 Y_RNA.376-201ENST00000365638 108 ntBASIC2.66□□□□□ -1.98
CNGA1P29973 RNU6-472P-201ENST00000384299 107 ntBASIC2.66□□□□□ -1.98
CNGA1P29973 RNU6-417P-201ENST00000384712 107 ntBASIC2.66□□□□□ -1.98
CNGA1P29973 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.66□□□□□ -1.98
CNGA1P29973 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.66□□□□□ -1.98
CNGA1P29973 RNU6-1203P-201ENST00000410703 110 ntBASIC2.66□□□□□ -1.98
CNGA1P29973 RNU2-61P-201ENST00000411069 191 ntBASIC2.66□□□□□ -1.98
CNGA1P29973 AC096920.1-201ENST00000423991 241 ntBASIC2.66□□□□□ -1.98
CNGA1P29973 CST2P1-201ENST00000425770 87 ntBASIC2.66□□□□□ -1.98
CNGA1P29973 POLR2KP2-201ENST00000438155 177 ntBASIC2.66□□□□□ -1.98
CNGA1P29973 RPS12P2-201ENST00000439728 269 ntBASIC2.66□□□□□ -1.98
CNGA1P29973 MRPS10P1-201ENST00000448483 130 ntBASIC2.66□□□□□ -1.98
CNGA1P29973 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.66□□□□□ -1.98
CNGA1P29973 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.66□□□□□ -1.98
CNGA1P29973 AL137100.2-201ENST00000555786 315 ntBASIC2.66□□□□□ -1.98
CNGA1P29973 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.66□□□□□ -1.98
CNGA1P29973 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
CNGA1P29973 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
CNGA1P29973 Y_RNA.124-201ENST00000363339 93 ntBASIC2.65□□□□□ -1.99
CNGA1P29973 Y_RNA.329-201ENST00000365209 107 ntBASIC2.65□□□□□ -1.99
CNGA1P29973 Y_RNA.383-201ENST00000383855 97 ntBASIC2.65□□□□□ -1.99
CNGA1P29973 AC011753.1-201ENST00000451001 220 ntBASIC2.65□□□□□ -1.99
CNGA1P29973 RPS26P55-201ENST00000471178 356 ntBASIC2.65□□□□□ -1.99
CNGA1P29973 SNORA70.12-201ENST00000516084 153 ntBASIC2.65□□□□□ -1.99
CNGA1P29973 RNU6-570P-201ENST00000517051 105 ntBASIC2.65□□□□□ -1.99
CNGA1P29973 AC027419.1-201ENST00000522976 328 ntBASIC2.65□□□□□ -1.99
CNGA1P29973 U6.73-201ENST00000619194 103 ntBASIC2.65□□□□□ -1.99
CNGA1P29973 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.65□□□□□ -1.99
CNGA1P29973 Y_RNA.136-201ENST00000363444 102 ntBASIC2.64□□□□□ -1.99
CNGA1P29973 Y_RNA.461-201ENST00000384263 103 ntBASIC2.64□□□□□ -1.99
CNGA1P29973 Y_RNA.518-201ENST00000384552 113 ntBASIC2.64□□□□□ -1.99
CNGA1P29973 MT-TW-201ENST00000387382 68 ntBASIC2.64□□□□□ -1.99
CNGA1P29973 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CNGA1P29973 SNORA48.1-201ENST00000390879 135 ntBASIC2.64□□□□□ -1.99
CNGA1P29973 MIR1302-3-201ENST00000408128 138 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms