Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 AC010620.1-201ENST00000601088 1102 ntBASIC-0.11□□□□□ -2.43
CASP1P29466 AC087683.2-201ENST00000611384 326 ntBASIC-0.11□□□□□ -2.43
CASP1P29466 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.12□□□□□ -2.43
CASP1P29466 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.12□□□□□ -2.43
CASP1P29466 RNU6-376P-201ENST00000384731 106 ntBASIC-0.12□□□□□ -2.43
CASP1P29466 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.12□□□□□ -2.43
CASP1P29466 RNU6-613P-201ENST00000410412 108 ntBASIC-0.12□□□□□ -2.43
CASP1P29466 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.12□□□□□ -2.43
CASP1P29466 SNORD71-201ENST00000411292 86 ntBASIC-0.12□□□□□ -2.43
CASP1P29466 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.12□□□□□ -2.43
CASP1P29466 MRPS10P2-201ENST00000431226 381 ntBASIC-0.12□□□□□ -2.43
CASP1P29466 AL353997.1-201ENST00000432936 108 ntBASIC-0.12□□□□□ -2.43
CASP1P29466 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.12□□□□□ -2.43
CASP1P29466 RNU7-180P-201ENST00000459240 63 ntBASIC-0.12□□□□□ -2.43
CASP1P29466 AP002963.1-201ENST00000530590 184 ntBASIC-0.12□□□□□ -2.43
CASP1P29466 AC093027.1-201ENST00000546698 429 ntBASIC-0.12□□□□□ -2.43
CASP1P29466 MIR1273G-201ENST00000577677 100 ntBASIC-0.12□□□□□ -2.43
CASP1P29466 MIR8076-201ENST00000611401 83 ntBASIC-0.12□□□□□ -2.43
CASP1P29466 SNORD114-5-201ENST00000362928 70 ntBASIC-0.13□□□□□ -2.43
CASP1P29466 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.13□□□□□ -2.43
CASP1P29466 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.13□□□□□ -2.43
CASP1P29466 SNORA20B-201ENST00000384220 132 ntBASIC-0.13□□□□□ -2.43
CASP1P29466 MIR521-1-201ENST00000384902 87 ntBASIC-0.13□□□□□ -2.43
CASP1P29466 RNU6-325P-201ENST00000411132 105 ntBASIC-0.13□□□□□ -2.43
CASP1P29466 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.13□□□□□ -2.43
CASP1P29466 AC015818.7-201ENST00000428754 109 ntBASIC-0.13□□□□□ -2.43
CASP1P29466 AC087499.7-201ENST00000441958 109 ntBASIC-0.13□□□□□ -2.43
CASP1P29466 AC091885.1-201ENST00000506658 268 ntBASIC-0.13□□□□□ -2.43
CASP1P29466 AC091144.1-201ENST00000519573 138 ntBASIC-0.13□□□□□ -2.43
CASP1P29466 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.13□□□□□ -2.43
CASP1P29466 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.13□□□□□ -2.43
CASP1P29466 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.13□□□□□ -2.43
CASP1P29466 RBM11P1-201ENST00000604951 799 ntBASIC-0.13□□□□□ -2.43
CASP1P29466 AC104408.1-201ENST00000605241 170 ntBASIC-0.13□□□□□ -2.43
CASP1P29466 HULC.1-201ENST00000612720 240 ntBASIC-0.13□□□□□ -2.43
CASP1P29466 AC009161.2-201ENST00000624626 138 ntBASIC-0.13□□□□□ -2.43
CASP1P29466 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.13□□□□□ -2.43
CASP1P29466 SNORD118-201ENST00000363593 134 ntBASIC-0.14□□□□□ -2.43
CASP1P29466 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.14□□□□□ -2.43
CASP1P29466 AC018865.2-201ENST00000423631 129 ntBASIC-0.14□□□□□ -2.43
CASP1P29466 AL359672.1-201ENST00000442302 409 ntBASIC-0.14□□□□□ -2.43
CASP1P29466 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
CASP1P29466 snoU13.21-201ENST00000459368 105 ntBASIC-0.14□□□□□ -2.43
CASP1P29466 RNA5SP227-201ENST00000516184 113 ntBASIC-0.14□□□□□ -2.43
CASP1P29466 RNU7-43P-201ENST00000516554 64 ntBASIC-0.14□□□□□ -2.43
CASP1P29466 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.14□□□□□ -2.43
CASP1P29466 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-0.14□□□□□ -2.43
CASP1P29466 MIR4290-201ENST00000583807 95 ntBASIC-0.14□□□□□ -2.43
CASP1P29466 AC012433.1-201ENST00000588916 398 ntBASIC-0.14□□□□□ -2.43
CASP1P29466 AC087683.1-201ENST00000591187 441 ntBASIC-0.14□□□□□ -2.43
CASP1P29466 AL391834.2-201ENST00000609982 546 ntBASIC-0.14□□□□□ -2.43
CASP1P29466 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 RNU6-517P-201ENST00000384362 110 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 AC243428.1-201ENST00000421099 264 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 AC005534.2-201ENST00000431047 433 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 Z82188.1-201ENST00000436709 154 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 RPS3AP17-201ENST00000472594 777 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 AC018710.1-201ENST00000506509 158 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 SNORA18.7-201ENST00000516910 131 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 AL358944.1-201ENST00000528537 144 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 AP003461.1-201ENST00000528866 78 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 CPDP1-201ENST00000579660 283 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 MIR5190-201ENST00000581537 80 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 AC245014.2-201ENST00000603689 287 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 AC246785.4-201ENST00000605374 287 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 AL355073.2-201ENST00000612106 557 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 MIR8087-201ENST00000612745 78 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 AP001506.1-201ENST00000615444 211 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 AL158209.2-201ENST00000619266 216 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 AC068137.4-201ENST00000638485 296 ntBASIC-0.15□□□□□ -2.43
CASP1P29466 RNU6-181P-201ENST00000363225 107 ntBASIC-0.16□□□□□ -2.44
CASP1P29466 MIR136-201ENST00000385207 82 ntBASIC-0.16□□□□□ -2.44
CASP1P29466 RNU6-700P-201ENST00000391043 107 ntBASIC-0.16□□□□□ -2.44
CASP1P29466 AL139396.1-201ENST00000421137 167 ntBASIC-0.16□□□□□ -2.44
CASP1P29466 MTCYBP8-201ENST00000422855 651 ntBASIC-0.16□□□□□ -2.44
CASP1P29466 AC133104.1-201ENST00000429100 218 ntBASIC-0.16□□□□□ -2.44
CASP1P29466 MTND1P4-201ENST00000435196 415 ntBASIC-0.16□□□□□ -2.44
CASP1P29466 AL356010.1-201ENST00000456364 102 ntBASIC-0.16□□□□□ -2.44
CASP1P29466 RNA5SP20-201ENST00000515976 84 ntBASIC-0.16□□□□□ -2.44
CASP1P29466 RNU6-445P-201ENST00000516949 107 ntBASIC-0.16□□□□□ -2.44
CASP1P29466 AC112693.2-201ENST00000556538 232 ntBASIC-0.16□□□□□ -2.44
CASP1P29466 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.16□□□□□ -2.44
CASP1P29466 MIR548AO-201ENST00000579992 96 ntBASIC-0.16□□□□□ -2.44
CASP1P29466 AC104260.1-201ENST00000616660 539 ntBASIC-0.16□□□□□ -2.44
CASP1P29466 AC010608.3-201ENST00000625048 527 ntBASIC-0.16□□□□□ -2.44
CASP1P29466 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.17□□□□□ -2.44
CASP1P29466 SNORD68-201ENST00000363214 84 ntBASIC-0.17□□□□□ -2.44
CASP1P29466 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.17□□□□□ -2.44
CASP1P29466 RNU6-407P-201ENST00000365280 104 ntBASIC-0.17□□□□□ -2.44
CASP1P29466 SNORA40.3-201ENST00000390964 122 ntBASIC-0.17□□□□□ -2.44
CASP1P29466 AL593851.1-201ENST00000426171 157 ntBASIC-0.17□□□□□ -2.44
CASP1P29466 SEPT7P4-201ENST00000437076 306 ntBASIC-0.17□□□□□ -2.44
CASP1P29466 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.17□□□□□ -2.44
CASP1P29466 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.17□□□□□ -2.44
CASP1P29466 RNA5SP94-201ENST00000516917 108 ntBASIC-0.17□□□□□ -2.44
CASP1P29466 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.17□□□□□ -2.44
CASP1P29466 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.17□□□□□ -2.44
CASP1P29466 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms