Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RNU6-407P-201ENST00000365280 104 ntBASIC1.45□□□□□ -2.18
BDNFP23560 RNU6-1310P-201ENST00000384153 107 ntBASIC1.45□□□□□ -2.18
BDNFP23560 RNU6-1145P-201ENST00000384246 107 ntBASIC1.45□□□□□ -2.18
BDNFP23560 Y_RNA.482-201ENST00000384377 111 ntBASIC1.45□□□□□ -2.18
BDNFP23560 MIR329-1-201ENST00000385028 80 ntBASIC1.45□□□□□ -2.18
BDNFP23560 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
BDNFP23560 RNA5SP482-201ENST00000391269 118 ntBASIC1.45□□□□□ -2.18
BDNFP23560 AL451046.2-201ENST00000403074 277 ntBASIC1.45□□□□□ -2.18
BDNFP23560 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.45□□□□□ -2.18
BDNFP23560 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.45□□□□□ -2.18
BDNFP23560 RNA5SP20-201ENST00000515976 84 ntBASIC1.45□□□□□ -2.18
BDNFP23560 AL359821.1-201ENST00000605519 182 ntBASIC1.45□□□□□ -2.18
BDNFP23560 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.45□□□□□ -2.18
BDNFP23560 AL391987.6-201ENST00000305671 199 ntBASIC1.44□□□□□ -2.18
BDNFP23560 MIR410-201ENST00000362222 80 ntBASIC1.44□□□□□ -2.18
BDNFP23560 Y_RNA.86-201ENST00000363020 111 ntBASIC1.44□□□□□ -2.18
BDNFP23560 RNU6-505P-201ENST00000384427 107 ntBASIC1.44□□□□□ -2.18
BDNFP23560 RNU6-601P-201ENST00000384540 107 ntBASIC1.44□□□□□ -2.18
BDNFP23560 MIR520G-201ENST00000385064 90 ntBASIC1.44□□□□□ -2.18
BDNFP23560 MIR548K-201ENST00000408406 116 ntBASIC1.44□□□□□ -2.18
BDNFP23560 Y_RNA.594-201ENST00000410373 140 ntBASIC1.44□□□□□ -2.18
BDNFP23560 RPS3AP52-201ENST00000435639 297 ntBASIC1.44□□□□□ -2.18
BDNFP23560 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.44□□□□□ -2.18
BDNFP23560 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.44□□□□□ -2.18
BDNFP23560 HSPE1P13-201ENST00000451143 297 ntBASIC1.44□□□□□ -2.18
BDNFP23560 AC092991.1-201ENST00000477176 376 ntBASIC1.44□□□□□ -2.18
BDNFP23560 RN7SKP49-201ENST00000516675 260 ntBASIC1.44□□□□□ -2.18
BDNFP23560 SNORA70.22-201ENST00000517160 124 ntBASIC1.44□□□□□ -2.18
BDNFP23560 AC125232.2-201ENST00000592457 143 ntBASIC1.44□□□□□ -2.18
BDNFP23560 AC068647.2-201ENST00000637380 353 ntBASIC1.44□□□□□ -2.18
BDNFP23560 SNORA27.1-201ENST00000362604 124 ntBASIC1.43□□□□□ -2.18
BDNFP23560 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.43□□□□□ -2.18
BDNFP23560 RAB28P5-201ENST00000427490 651 ntBASIC1.43□□□□□ -2.18
BDNFP23560 RPL39P39-201ENST00000455840 151 ntBASIC1.43□□□□□ -2.18
BDNFP23560 AC005840.1-201ENST00000498412 377 ntBASIC1.43□□□□□ -2.18
BDNFP23560 AC018710.1-201ENST00000506509 158 ntBASIC1.43□□□□□ -2.18
BDNFP23560 RNA5SP61-201ENST00000516453 100 ntBASIC1.43□□□□□ -2.18
BDNFP23560 AC090049.2-201ENST00000550377 109 ntBASIC1.43□□□□□ -2.18
BDNFP23560 AC018448.1-201ENST00000552843 316 ntBASIC1.43□□□□□ -2.18
BDNFP23560 AC011712.1-201ENST00000588959 234 ntBASIC1.43□□□□□ -2.18
BDNFP23560 AL022345.2-201ENST00000606307 135 ntBASIC1.43□□□□□ -2.18
BDNFP23560 AC005014.2-201ENST00000607795 599 ntBASIC1.43□□□□□ -2.18
BDNFP23560 AC093783.1-201ENST00000612976 329 ntBASIC1.43□□□□□ -2.18
BDNFP23560 AL157834.3-201ENST00000615543 103 ntBASIC1.43□□□□□ -2.18
BDNFP23560 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.43□□□□□ -2.18
BDNFP23560 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
BDNFP23560 SNORD114-7-201ENST00000362520 77 ntBASIC1.42□□□□□ -2.18
BDNFP23560 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.42□□□□□ -2.18
BDNFP23560 RNU6-321P-201ENST00000410912 106 ntBASIC1.42□□□□□ -2.18
BDNFP23560 AC018865.2-201ENST00000423631 129 ntBASIC1.42□□□□□ -2.18
BDNFP23560 RPL23AP50-201ENST00000434149 455 ntBASIC1.42□□□□□ -2.18
BDNFP23560 TRMT112P2-201ENST00000512910 132 ntBASIC1.42□□□□□ -2.18
BDNFP23560 RNU6-718P-201ENST00000516166 105 ntBASIC1.42□□□□□ -2.18
BDNFP23560 RNU6-922P-201ENST00000516753 99 ntBASIC1.42□□□□□ -2.18
BDNFP23560 AL358944.1-201ENST00000528537 144 ntBASIC1.42□□□□□ -2.18
BDNFP23560 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.42□□□□□ -2.18
BDNFP23560 AC106754.2-201ENST00000623006 233 ntBASIC1.42□□□□□ -2.18
BDNFP23560 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
BDNFP23560 Y_RNA.267-201ENST00000364679 109 ntBASIC1.41□□□□□ -2.18
BDNFP23560 SNORA2.2-201ENST00000365473 135 ntBASIC1.41□□□□□ -2.18
BDNFP23560 MIR873-201ENST00000401120 77 ntBASIC1.41□□□□□ -2.18
BDNFP23560 MIR548F5-201ENST00000408421 86 ntBASIC1.41□□□□□ -2.18
BDNFP23560 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.41□□□□□ -2.18
BDNFP23560 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.41□□□□□ -2.18
BDNFP23560 AL589823.1-201ENST00000429577 183 ntBASIC1.41□□□□□ -2.18
BDNFP23560 RNU1-123P-201ENST00000458950 160 ntBASIC1.41□□□□□ -2.18
BDNFP23560 RNU6-625P-201ENST00000459412 107 ntBASIC1.41□□□□□ -2.18
BDNFP23560 AC105758.1-201ENST00000506038 399 ntBASIC1.41□□□□□ -2.18
BDNFP23560 Y_RNA.655-201ENST00000515919 96 ntBASIC1.41□□□□□ -2.18
BDNFP23560 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.41□□□□□ -2.18
BDNFP23560 RNA5SP404-201ENST00000517118 132 ntBASIC1.41□□□□□ -2.18
BDNFP23560 AC022868.1-201ENST00000517767 391 ntBASIC1.41□□□□□ -2.18
BDNFP23560 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.41□□□□□ -2.18
BDNFP23560 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
BDNFP23560 AC012676.2-201ENST00000619258 186 ntBASIC1.41□□□□□ -2.18
BDNFP23560 AL353770.2-201ENST00000620024 78 ntBASIC1.41□□□□□ -2.18
BDNFP23560 AC027335.2-201ENST00000624030 375 ntBASIC1.41□□□□□ -2.18
BDNFP23560 AC073869.6-201ENST00000640656 341 ntBASIC1.41□□□□□ -2.18
BDNFP23560 Y_RNA.164-201ENST00000363709 102 ntBASIC1.4□□□□□ -2.19
BDNFP23560 Y_RNA.327-201ENST00000365201 102 ntBASIC1.4□□□□□ -2.19
BDNFP23560 RNU6-424P-201ENST00000384367 105 ntBASIC1.4□□□□□ -2.19
BDNFP23560 MIR653-201ENST00000385279 96 ntBASIC1.4□□□□□ -2.19
BDNFP23560 AL355796.1-201ENST00000406706 323 ntBASIC1.4□□□□□ -2.19
BDNFP23560 ELOCP21-201ENST00000412558 336 ntBASIC1.4□□□□□ -2.19
BDNFP23560 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.4□□□□□ -2.19
BDNFP23560 AC092473.1-201ENST00000441098 221 ntBASIC1.4□□□□□ -2.19
BDNFP23560 AL133373.1-201ENST00000497098 94 ntBASIC1.4□□□□□ -2.19
BDNFP23560 SNORD116-28-201ENST00000516123 91 ntBASIC1.4□□□□□ -2.19
BDNFP23560 RNA5SP168-201ENST00000516642 112 ntBASIC1.4□□□□□ -2.19
BDNFP23560 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.4□□□□□ -2.19
BDNFP23560 AL133216.2-202ENST00000634512 349 ntBASIC1.4□□□□□ -2.19
BDNFP23560 MIR3674-201ENST00000636576 68 ntBASIC1.4□□□□□ -2.19
BDNFP23560 Y_RNA.4-201ENST00000362333 112 ntBASIC1.39□□□□□ -2.19
BDNFP23560 RNU1-124P-201ENST00000363861 145 ntBASIC1.39□□□□□ -2.19
BDNFP23560 Y_RNA.557-201ENST00000384680 107 ntBASIC1.39□□□□□ -2.19
BDNFP23560 MIR548F1-201ENST00000408667 84 ntBASIC1.39□□□□□ -2.19
BDNFP23560 AC092423.1-201ENST00000430165 186 ntBASIC1.39□□□□□ -2.19
BDNFP23560 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.39□□□□□ -2.19
BDNFP23560 AC004223.1-201ENST00000479840 271 ntBASIC1.39□□□□□ -2.19
BDNFP23560 AC116353.2-201ENST00000505332 712 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms