Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.15□□□□□ -2.07
TNFSF4P23510 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
TNFSF4P23510 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.14□□□□□ -2.07
TNFSF4P23510 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TNFSF4P23510 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.14□□□□□ -2.07
TNFSF4P23510 SNORD113-8-201ENST00000363497 74 ntBASIC2.14□□□□□ -2.07
TNFSF4P23510 RPL21P1-201ENST00000399532 476 ntBASIC2.14□□□□□ -2.07
TNFSF4P23510 AL731563.1-201ENST00000442202 214 ntBASIC2.14□□□□□ -2.07
TNFSF4P23510 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.14□□□□□ -2.07
TNFSF4P23510 AC022254.1-201ENST00000567857 235 ntBASIC2.14□□□□□ -2.07
TNFSF4P23510 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.14□□□□□ -2.07
TNFSF4P23510 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TNFSF4P23510 Y_RNA.19-201ENST00000362462 99 ntBASIC2.13□□□□□ -2.07
TNFSF4P23510 RNU4-90P-201ENST00000362773 141 ntBASIC2.13□□□□□ -2.07
TNFSF4P23510 SNORD114-30-201ENST00000364448 72 ntBASIC2.13□□□□□ -2.07
TNFSF4P23510 Y_RNA.329-201ENST00000365209 107 ntBASIC2.13□□□□□ -2.07
TNFSF4P23510 Y_RNA.500-201ENST00000384466 111 ntBASIC2.13□□□□□ -2.07
TNFSF4P23510 RNU6-376P-201ENST00000384731 106 ntBASIC2.13□□□□□ -2.07
TNFSF4P23510 MIR562-201ENST00000384894 95 ntBASIC2.13□□□□□ -2.07
TNFSF4P23510 RNU2-61P-201ENST00000411069 191 ntBASIC2.13□□□□□ -2.07
TNFSF4P23510 POLR2KP2-201ENST00000438155 177 ntBASIC2.13□□□□□ -2.07
TNFSF4P23510 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.13□□□□□ -2.07
TNFSF4P23510 MTND5P22-201ENST00000458380 195 ntBASIC2.13□□□□□ -2.07
TNFSF4P23510 LINC01399-202ENST00000458450 244 ntBASIC2.13□□□□□ -2.07
TNFSF4P23510 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.13□□□□□ -2.07
TNFSF4P23510 RNA5SP148-201ENST00000516527 94 ntBASIC2.13□□□□□ -2.07
TNFSF4P23510 SNORA31.17-201ENST00000516953 127 ntBASIC2.13□□□□□ -2.07
TNFSF4P23510 AC073413.2-201ENST00000604332 360 ntBASIC2.13□□□□□ -2.07
TNFSF4P23510 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.13□□□□□ -2.07
TNFSF4P23510 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.13□□□□□ -2.07
TNFSF4P23510 IGHVIII-44-202ENST00000636235 289 ntBASIC2.13□□□□□ -2.07
TNFSF4P23510 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TNFSF4P23510 AC018630.2-201ENST00000534866 2403 ntBASIC2.12□□□□□ -2.07
TNFSF4P23510 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TNFSF4P23510 SNORD81.1-201ENST00000363064 77 ntBASIC2.12□□□□□ -2.07
TNFSF4P23510 RNA5SP456-201ENST00000364002 114 ntBASIC2.12□□□□□ -2.07
TNFSF4P23510 RNU6-950P-201ENST00000384651 107 ntBASIC2.12□□□□□ -2.07
TNFSF4P23510 SNORA80E-201ENST00000384744 137 ntBASIC2.12□□□□□ -2.07
TNFSF4P23510 Y_RNA.581-201ENST00000391017 97 ntBASIC2.12□□□□□ -2.07
TNFSF4P23510 RPS12P2-201ENST00000439728 269 ntBASIC2.12□□□□□ -2.07
TNFSF4P23510 AC108938.1-201ENST00000451204 136 ntBASIC2.12□□□□□ -2.07
TNFSF4P23510 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.12□□□□□ -2.07
TNFSF4P23510 TRBV12-1-201ENST00000479785 344 ntBASIC2.12□□□□□ -2.07
TNFSF4P23510 MRPS17P9-201ENST00000511924 393 ntBASIC2.12□□□□□ -2.07
TNFSF4P23510 PRR13P7-201ENST00000605538 430 ntBASIC2.12□□□□□ -2.07
TNFSF4P23510 MIR6852-201ENST00000621699 66 ntBASIC2.12□□□□□ -2.07
TNFSF4P23510 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
TNFSF4P23510 RNU6-117P-201ENST00000365415 107 ntBASIC2.11□□□□□ -2.07
TNFSF4P23510 Y_RNA.383-201ENST00000383855 97 ntBASIC2.11□□□□□ -2.07
TNFSF4P23510 RNU6-121P-201ENST00000410525 99 ntBASIC2.11□□□□□ -2.07
TNFSF4P23510 Y_RNA.602-201ENST00000410535 92 ntBASIC2.11□□□□□ -2.07
TNFSF4P23510 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
TNFSF4P23510 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.11□□□□□ -2.07
TNFSF4P23510 RPL36AP21-201ENST00000490372 323 ntBASIC2.11□□□□□ -2.07
TNFSF4P23510 RPL23AP63-201ENST00000498752 471 ntBASIC2.11□□□□□ -2.07
TNFSF4P23510 RNU6-496P-201ENST00000516145 99 ntBASIC2.11□□□□□ -2.07
TNFSF4P23510 RNA5SP320-201ENST00000516263 124 ntBASIC2.11□□□□□ -2.07
TNFSF4P23510 SCARNA15.1-201ENST00000516384 125 ntBASIC2.11□□□□□ -2.07
TNFSF4P23510 RNU6-1337P-201ENST00000516525 95 ntBASIC2.11□□□□□ -2.07
TNFSF4P23510 RNA5SP437-201ENST00000517249 129 ntBASIC2.11□□□□□ -2.07
TNFSF4P23510 AC008737.2-201ENST00000599446 118 ntBASIC2.11□□□□□ -2.07
TNFSF4P23510 AL353621.2-201ENST00000605340 133 ntBASIC2.11□□□□□ -2.07
TNFSF4P23510 CTSLP2-204ENST00000629029 392 ntBASIC2.11□□□□□ -2.07
TNFSF4P23510 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.11□□□□□ -2.07
TNFSF4P23510 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TNFSF4P23510 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TNFSF4P23510 Y_RNA.105-201ENST00000363182 111 ntBASIC2.1□□□□□ -2.07
TNFSF4P23510 Y_RNA.222-201ENST00000364264 102 ntBASIC2.1□□□□□ -2.07
TNFSF4P23510 RNU6-1248P-201ENST00000391096 64 ntBASIC2.1□□□□□ -2.07
TNFSF4P23510 RNU6-1109P-201ENST00000391187 107 ntBASIC2.1□□□□□ -2.07
TNFSF4P23510 AL135786.1-201ENST00000415892 214 ntBASIC2.1□□□□□ -2.07
TNFSF4P23510 OOSP1P1-201ENST00000423265 274 ntBASIC2.1□□□□□ -2.07
TNFSF4P23510 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.1□□□□□ -2.07
TNFSF4P23510 UBE2DNL-203ENST00000474922 222 ntBASIC2.1□□□□□ -2.07
TNFSF4P23510 AL360085.1-201ENST00000604713 532 ntBASIC2.1□□□□□ -2.07
TNFSF4P23510 MIR6079-201ENST00000635807 62 ntBASIC2.1□□□□□ -2.07
TNFSF4P23510 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TNFSF4P23510 AL356292.1-201ENST00000283110 373 ntBASIC2.09□□□□□ -2.07
TNFSF4P23510 Y_RNA.162-201ENST00000363683 102 ntBASIC2.09□□□□□ -2.07
TNFSF4P23510 Y_RNA.286-201ENST00000364813 102 ntBASIC2.09□□□□□ -2.07
TNFSF4P23510 MIR520G-201ENST00000385064 90 ntBASIC2.09□□□□□ -2.07
TNFSF4P23510 RNU6-360P-201ENST00000390944 104 ntBASIC2.09□□□□□ -2.07
TNFSF4P23510 AL359511.1-201ENST00000402970 211 ntBASIC2.09□□□□□ -2.07
TNFSF4P23510 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.09□□□□□ -2.07
TNFSF4P23510 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.09□□□□□ -2.07
TNFSF4P23510 FTH1P12-201ENST00000432137 551 ntBASIC2.09□□□□□ -2.07
TNFSF4P23510 HSPE1P9-201ENST00000440046 311 ntBASIC2.09□□□□□ -2.07
TNFSF4P23510 AL513328.1-201ENST00000446460 224 ntBASIC2.09□□□□□ -2.07
TNFSF4P23510 MTND4LP30-201ENST00000454092 297 ntBASIC2.09□□□□□ -2.07
TNFSF4P23510 HSPE1P25-201ENST00000455484 251 ntBASIC2.09□□□□□ -2.07
TNFSF4P23510 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.09□□□□□ -2.07
TNFSF4P23510 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.09□□□□□ -2.07
TNFSF4P23510 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.09□□□□□ -2.07
TNFSF4P23510 AP003733.2-201ENST00000529409 171 ntBASIC2.09□□□□□ -2.07
TNFSF4P23510 MIR4435-1-201ENST00000582552 80 ntBASIC2.09□□□□□ -2.07
TNFSF4P23510 DEFB117-201ENST00000602356 141 ntBASIC2.09□□□□□ -2.07
TNFSF4P23510 AL096840.1-201ENST00000603287 93 ntBASIC2.09□□□□□ -2.07
TNFSF4P23510 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TNFSF4P23510 RNU6-661P-201ENST00000362409 107 ntBASIC2.08□□□□□ -2.08
TNFSF4P23510 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms