Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 RNU6-363P-201ENST00000362895 105 ntBASIC4.37□□□□□ -1.71
PTPREP23469 RNU6-409P-201ENST00000384114 104 ntBASIC4.37□□□□□ -1.71
PTPREP23469 SNORA18-201ENST00000384416 132 ntBASIC4.37□□□□□ -1.71
PTPREP23469 MIR1183-201ENST00000408856 89 ntBASIC4.37□□□□□ -1.71
PTPREP23469 Z98742.2-201ENST00000431564 187 ntBASIC4.37□□□□□ -1.71
PTPREP23469 AC010099.1-201ENST00000455434 375 ntBASIC4.37□□□□□ -1.71
PTPREP23469 TRBV12-2-201ENST00000489763 344 ntBASIC4.37□□□□□ -1.71
PTPREP23469 RNA5SP164-201ENST00000516533 110 ntBASIC4.37□□□□□ -1.71
PTPREP23469 Y_RNA.773-201ENST00000607168 90 ntBASIC4.37□□□□□ -1.71
PTPREP23469 AL359075.3-201ENST00000613288 217 ntBASIC4.37□□□□□ -1.71
PTPREP23469 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PTPREP23469 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPREP23469 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPREP23469 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTPREP23469 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTPREP23469 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTPREP23469 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PTPREP23469 MIR126-201ENST00000362291 85 ntBASIC4.36□□□□□ -1.71
PTPREP23469 Y_RNA.37-201ENST00000362606 108 ntBASIC4.36□□□□□ -1.71
PTPREP23469 RNU1-18P-201ENST00000363062 164 ntBASIC4.36□□□□□ -1.71
PTPREP23469 Y_RNA.96-201ENST00000363092 109 ntBASIC4.36□□□□□ -1.71
PTPREP23469 SNORA14A-201ENST00000364773 135 ntBASIC4.36□□□□□ -1.71
PTPREP23469 RNU6-652P-201ENST00000365488 107 ntBASIC4.36□□□□□ -1.71
PTPREP23469 RNU6-1274P-201ENST00000384557 107 ntBASIC4.36□□□□□ -1.71
PTPREP23469 RNVU1-14-201ENST00000384770 164 ntBASIC4.36□□□□□ -1.71
PTPREP23469 RN7SKP177-201ENST00000410567 355 ntBASIC4.36□□□□□ -1.71
PTPREP23469 Y_RNA.620-201ENST00000411009 88 ntBASIC4.36□□□□□ -1.71
PTPREP23469 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPREP23469 AC025750.2-201ENST00000442609 450 ntBASIC4.36□□□□□ -1.71
PTPREP23469 AC006445.1-201ENST00000491925 405 ntBASIC4.36□□□□□ -1.71
PTPREP23469 RNU7-25P-201ENST00000516544 62 ntBASIC4.36□□□□□ -1.71
PTPREP23469 SNORD36C-201ENST00000516733 66 ntBASIC4.36□□□□□ -1.71
PTPREP23469 AP000867.2-201ENST00000532468 320 ntBASIC4.36□□□□□ -1.71
PTPREP23469 MIR4668-201ENST00000582284 70 ntBASIC4.36□□□□□ -1.71
PTPREP23469 HSPE1P19-201ENST00000603327 295 ntBASIC4.36□□□□□ -1.71
PTPREP23469 AL137849.1-201ENST00000604767 169 ntBASIC4.36□□□□□ -1.71
PTPREP23469 YPEL5P2-201ENST00000605553 359 ntBASIC4.36□□□□□ -1.71
PTPREP23469 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC4.36□□□□□ -1.71
PTPREP23469 MIR203B-201ENST00000636080 86 ntBASIC4.36□□□□□ -1.71
PTPREP23469 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
PTPREP23469 MFSD8-236ENST00000641509 4050 ntBASIC4.36□□□□□ -1.71
PTPREP23469 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPREP23469 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
PTPREP23469 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTPREP23469 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTPREP23469 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPREP23469 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPREP23469 RNU6-661P-201ENST00000362409 107 ntBASIC4.35□□□□□ -1.71
PTPREP23469 SNORD115-28-201ENST00000363931 81 ntBASIC4.35□□□□□ -1.71
PTPREP23469 Y_RNA.440-201ENST00000384120 114 ntBASIC4.35□□□□□ -1.71
PTPREP23469 MIR218-2-201ENST00000385006 110 ntBASIC4.35□□□□□ -1.71
PTPREP23469 MIR605-201ENST00000385078 83 ntBASIC4.35□□□□□ -1.71
PTPREP23469 MIR802-201ENST00000390235 94 ntBASIC4.35□□□□□ -1.71
PTPREP23469 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PTPREP23469 SNORA71B-202ENST00000439232 272 ntBASIC4.35□□□□□ -1.71
PTPREP23469 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPREP23469 RAC1P2-201ENST00000511164 579 ntBASIC4.35□□□□□ -1.71
PTPREP23469 AC020914.4-201ENST00000597690 277 ntBASIC4.35□□□□□ -1.71
PTPREP23469 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPREP23469 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPREP23469 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTPREP23469 SNORD115-19-201ENST00000363098 82 ntBASIC4.34□□□□□ -1.71
PTPREP23469 SNORD115-18-201ENST00000363293 82 ntBASIC4.34□□□□□ -1.71
PTPREP23469 RNU4-67P-201ENST00000364569 141 ntBASIC4.34□□□□□ -1.71
PTPREP23469 SNORD115-17-201ENST00000364612 82 ntBASIC4.34□□□□□ -1.71
PTPREP23469 RNU4-16P-201ENST00000364737 141 ntBASIC4.34□□□□□ -1.71
PTPREP23469 MIR889-201ENST00000401280 79 ntBASIC4.34□□□□□ -1.71
PTPREP23469 MIR1253-201ENST00000408273 105 ntBASIC4.34□□□□□ -1.71
PTPREP23469 ATP5A1P2-201ENST00000412323 255 ntBASIC4.34□□□□□ -1.71
PTPREP23469 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.34□□□□□ -1.71
PTPREP23469 RPS12P18-201ENST00000442381 270 ntBASIC4.34□□□□□ -1.71
PTPREP23469 Y_RNA.714-201ENST00000517065 90 ntBASIC4.34□□□□□ -1.71
PTPREP23469 MIR5195-201ENST00000583555 115 ntBASIC4.34□□□□□ -1.71
PTPREP23469 AL513534.2-201ENST00000603836 250 ntBASIC4.34□□□□□ -1.71
PTPREP23469 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPREP23469 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.72
PTPREP23469 AL049781.1-201ENST00000623195 3585 ntBASIC4.33□□□□□ -1.72
PTPREP23469 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PTPREP23469 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.33□□□□□ -1.72
PTPREP23469 SNORD45B-201ENST00000364617 72 ntBASIC4.33□□□□□ -1.72
PTPREP23469 Y_RNA.351-201ENST00000365436 96 ntBASIC4.33□□□□□ -1.72
PTPREP23469 RNU6-1186P-201ENST00000410429 97 ntBASIC4.33□□□□□ -1.72
PTPREP23469 Y_RNA.611-201ENST00000410682 108 ntBASIC4.33□□□□□ -1.72
PTPREP23469 CYCSP35-201ENST00000451978 304 ntBASIC4.33□□□□□ -1.72
PTPREP23469 RPL30P14-201ENST00000482744 348 ntBASIC4.33□□□□□ -1.72
PTPREP23469 RNA5SP208-201ENST00000516156 78 ntBASIC4.33□□□□□ -1.72
PTPREP23469 Y_RNA.705-201ENST00000516862 110 ntBASIC4.33□□□□□ -1.72
PTPREP23469 MIR6076-201ENST00000617521 113 ntBASIC4.33□□□□□ -1.72
PTPREP23469 AC006160.2-201ENST00000637708 154 ntBASIC4.33□□□□□ -1.72
PTPREP23469 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPREP23469 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PTPREP23469 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPREP23469 MAPK10-373ENST00000641983 6772 ntBASIC4.33□□□□□ -1.72
PTPREP23469 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPREP23469 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPREP23469 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPREP23469 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPREP23469 RNU1-96P-201ENST00000364163 162 ntBASIC4.32□□□□□ -1.72
PTPREP23469 MIR708-201ENST00000390708 88 ntBASIC4.32□□□□□ -1.72
PTPREP23469 RNU6-887P-201ENST00000410660 100 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms