Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RNY4P36-201ENST00000391116 96 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 MRPL35P1-201ENST00000404272 572 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.54□□□□□ -2.16
ERCC2P18074 AC245047.3-201ENST00000429428 127 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 AC245517.4-201ENST00000448601 281 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 RNU6-625P-201ENST00000459412 107 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 AC079140.2-201ENST00000506193 142 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 AL117351.2-201ENST00000513571 157 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 RNA5SP445-201ENST00000515889 115 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 SNORA40.9-201ENST00000515895 93 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 AC019176.1-201ENST00000518519 225 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 AP002001.1-203ENST00000534002 267 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 AL645939.4-201ENST00000604495 135 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 AC133104.2-201ENST00000615272 193 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.54□□□□□ -2.16
ERCC2P18074 WWP1P1-201ENST00000466609 2769 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 AP000648.3-201ENST00000623539 4507 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ERCC2P18074 RNA5SP432-201ENST00000362480 116 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 RNU4-13P-201ENST00000364019 141 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 RNU1-42P-201ENST00000364033 160 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 Y_RNA.356-201ENST00000365475 113 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 Y_RNA.529-201ENST00000384586 119 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 RNU6-1031P-201ENST00000384773 107 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 SNORA69.1-201ENST00000390904 137 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 SNORA67.5-201ENST00000391036 107 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 SNORA67.6-201ENST00000391093 99 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 MRPL42P3-201ENST00000401492 326 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 SNORD12B-201ENST00000410433 91 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 MRPS18CP6-201ENST00000423587 223 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 ELOCP24-201ENST00000456370 334 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 FGF7P4-201ENST00000509595 295 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 Y_RNA.702-201ENST00000516843 96 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 Y_RNA.718-201ENST00000517110 102 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 MIR2355-201ENST00000517199 87 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 RNU6-902P-201ENST00000517212 91 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 AC015720.1-201ENST00000565251 277 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.53□□□□□ -2.16
ERCC2P18074 AC073413.2-201ENST00000604332 360 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 AP001485.1-201ENST00000604799 199 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 AC021506.2-201ENST00000612354 169 ntBASIC1.53□□□□□ -2.16
ERCC2P18074 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ERCC2P18074 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.52□□□□□ -2.17
ERCC2P18074 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
ERCC2P18074 RNY3P11-201ENST00000364153 102 ntBASIC1.52□□□□□ -2.17
ERCC2P18074 RNU6-440P-201ENST00000390882 105 ntBASIC1.52□□□□□ -2.17
ERCC2P18074 Y_RNA.592-201ENST00000410274 109 ntBASIC1.52□□□□□ -2.17
ERCC2P18074 RN7SKP200-201ENST00000410564 320 ntBASIC1.52□□□□□ -2.17
ERCC2P18074 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.52□□□□□ -2.17
ERCC2P18074 RAB28P5-201ENST00000427490 651 ntBASIC1.52□□□□□ -2.17
ERCC2P18074 AC027119.1-201ENST00000440877 241 ntBASIC1.52□□□□□ -2.17
ERCC2P18074 RNU1-98P-201ENST00000458992 160 ntBASIC1.52□□□□□ -2.17
ERCC2P18074 Y_RNA.632-201ENST00000459189 102 ntBASIC1.52□□□□□ -2.17
ERCC2P18074 RNU7-169P-201ENST00000459456 61 ntBASIC1.52□□□□□ -2.17
ERCC2P18074 AC097462.1-201ENST00000514125 324 ntBASIC1.52□□□□□ -2.17
ERCC2P18074 MIR4303-201ENST00000581299 66 ntBASIC1.52□□□□□ -2.17
ERCC2P18074 AC084781.2-201ENST00000615568 161 ntBASIC1.52□□□□□ -2.17
ERCC2P18074 MIR3674-201ENST00000636576 68 ntBASIC1.52□□□□□ -2.17
ERCC2P18074 AC018630.2-201ENST00000534866 2403 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 MIR410-201ENST00000362222 80 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 Y_RNA.70-201ENST00000362886 110 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 RNU1-22P-201ENST00000363334 158 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 RNU6-457P-201ENST00000363999 107 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 RNU6-454P-201ENST00000364292 107 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 Y_RNA.263-201ENST00000364659 114 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 MIR513A1-201ENST00000385138 129 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 MIR559-201ENST00000385188 96 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 RNA5SP475-201ENST00000410568 110 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.51□□□□□ -2.17
ERCC2P18074 RPS27P16-201ENST00000425758 201 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 MTND4P28-201ENST00000426217 387 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 AL354695.1-201ENST00000427935 228 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.51□□□□□ -2.17
ERCC2P18074 RNU7-94P-201ENST00000459576 63 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.51□□□□□ -2.17
ERCC2P18074 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.51□□□□□ -2.17
ERCC2P18074 Y_RNA.675-201ENST00000516389 149 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 RNU7-4P-201ENST00000516961 62 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 RNU7-172P-201ENST00000517125 64 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 SNORA31.24-201ENST00000517232 57 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 MIR3684-201ENST00000579779 74 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 MIR3937-201ENST00000580135 106 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 AL390123.1-201ENST00000603216 237 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 U6.115-201ENST00000636045 103 ntBASIC1.51□□□□□ -2.17
ERCC2P18074 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ERCC2P18074 SNORD33-201ENST00000362761 85 ntBASIC1.5□□□□□ -2.17
ERCC2P18074 RNU6-490P-201ENST00000362985 107 ntBASIC1.5□□□□□ -2.17
ERCC2P18074 RNU6-407P-201ENST00000365280 104 ntBASIC1.5□□□□□ -2.17
ERCC2P18074 SNORA17.3-201ENST00000391159 129 ntBASIC1.5□□□□□ -2.17
ERCC2P18074 MTCO3P19-201ENST00000415864 321 ntBASIC1.5□□□□□ -2.17
ERCC2P18074 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
ERCC2P18074 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.5□□□□□ -2.17
ERCC2P18074 RNA5SP20-201ENST00000515976 84 ntBASIC1.5□□□□□ -2.17
ERCC2P18074 AC144568.1-201ENST00000520139 137 ntBASIC1.5□□□□□ -2.17
ERCC2P18074 AC093027.1-201ENST00000546698 429 ntBASIC1.5□□□□□ -2.17
ERCC2P18074 AC112487.2-201ENST00000637950 304 ntBASIC1.5□□□□□ -2.17
ERCC2P18074 RNU6-1123P-201ENST00000362347 106 ntBASIC1.49□□□□□ -2.17
ERCC2P18074 SNORA27.1-201ENST00000362604 124 ntBASIC1.49□□□□□ -2.17
ERCC2P18074 Y_RNA.314-201ENST00000365114 102 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms